RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	PRP38	Q00723	242 aa	Predicted RBP	4.1	□□□□□ -1.75
TRF5	YNL299W	GCN5	Q03330	439 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	YDR131C	Q03899	556 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	GAD1	Q04792	585 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	SNO4	Q04902	237 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	BCH1	Q05029	724 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	YLR413W	Q06689	675 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	RXT3	Q07458	294 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	HSP33	Q08914	237 aa	Known RBP	4.1	□□□□□ -1.75
TRF5	YNL299W	HSP32	Q08992	237 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	TRM10	Q12400	293 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	LAS17	Q12446	633 aa		4.1	□□□□□ -1.75
TRF5	YNL299W	HIP1	P06775	603 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	RAD7	P06779	565 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	APE1	P14904	514 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	SEN2	P16658	377 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	GIT1	P25346	518 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	RHB1	P25378	209 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	VPH1	P32563	840 aa	Known RBP	4.09	□□□□□ -1.75
TRF5	YNL299W	TKL2	P33315	681 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	MAC1	P35192	417 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	OMA1	P36163	345 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	GPX2	P38143	162 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	ARN2	P38724	620 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	SFB3	P38810	929 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	MIT1	P40002	666 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	BAP3	P41815	604 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	BST1	P43571	1029 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	MDE1	P47095	244 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	SAP4	P53036	818 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	ARO8	P53090	500 aa	Known RBP	4.09	□□□□□ -1.75
TRF5	YNL299W	GND2	P53319	492 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	SNF12	P53628	566 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	KTR6	P54070	446 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	TAF12	Q03761	539 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	YLR224W	Q05947	369 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	RIF2	Q06208	395 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	YOL019W	Q08157	551 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	GSH2	Q08220	491 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	PGC1	Q08959	321 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	GPM2	Q12008	311 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	YLR049C	Q12110	428 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	MHF1	Q3E835	90 aa		4.09	□□□□□ -1.75
TRF5	YNL299W	ATP1	P07251	545 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	FUM1	P08417	488 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	PHO84	P25297	587 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	CHA1	P25379	360 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	ARO7	P32178	256 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	IMP3	P32899	183 aa	Predicted RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	MRPL6	P32904	214 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	PPQ1	P32945	549 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	MUP3	P38734	546 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	FSH1	P38777	243 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	IPI1	P38803	334 aa	Predicted RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	VMA7	P39111	118 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	FHL1	P39521	936 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	ARF3	P40994	183 aa	RIP-Chip data	4.09	□□□□□ -1.76	not detected
TRF5	YNL299W	YGR210C	P42942	411 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	RPS10B	P46784	105 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	BIO3	P50277	480 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	MRPL50	P53724	139 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	CPR8	P53728	308 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	YNR068C	P53754	272 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	MRPL22	P53881	309 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	PNG1	Q02890	363 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	TRS31	Q03337	283 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	MAK3	Q03503	176 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	DML1	Q03652	475 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	EMI2	Q04409	500 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	GSF2	Q04697	403 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	YHC1	Q05900	231 aa	Known RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	SWA2	Q06677	668 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	RPS10A	Q08745	105 aa	Predicted RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	RAX1	Q08760	435 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	NBP2	Q12163	236 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	ACF2	Q12168	779 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	YGK3	Q12222	375 aa	Predicted RBP	4.09	□□□□□ -1.76
TRF5	YNL299W	GTT2	Q12390	233 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	FMP16	Q12497	93 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	RIB3	Q99258	208 aa		4.09	□□□□□ -1.76
TRF5	YNL299W	COX5A	P00424	153 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	ADE5,7	P07244	802 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	SAR1	P20606	190 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	ASF2	P32448	525 aa	Predicted RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	SDH3	P33421	198 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	GCS1	P35197	352 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	COS111	P38308	924 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	STB5	P38699	743 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	YEL028W	P39989	153 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	TPA1	P40032	644 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	FKH2	P41813	862 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	SER2	P42941	309 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	PEX31	P53203	462 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	RBG2	P53295	368 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	FDC1	Q03034	503 aa		4.08	□□□□□ -1.76
TRF5	YNL299W	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	NGL2	Q03264	515 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
TRF5	YNL299W	YMR111C	Q04461	462 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms