RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PEP5P12868 1029 aa3.57□□□□□ -1.84
SSO2YMR183C TKL1P23254 680 aaKnown RBP3.57□□□□□ -1.84
SSO2YMR183C ICL1P28240 557 aaPredicted RBP3.57□□□□□ -1.84
SSO2YMR183C YPS1P32329 569 aa3.57□□□□□ -1.84
SSO2YMR183C PRP21P32524 280 aaPredicted RBP3.57□□□□□ -1.84
SSO2YMR183C FRE1P32791 686 aa3.57□□□□□ -1.84
SSO2YMR183C ARC19P33204 171 aaKnown RBP3.57□□□□□ -1.84
SSO2YMR183C MIA40P36046 403 aa3.57□□□□□ -1.84
SSO2YMR183C TCM62P38228 572 aaKnown RBP3.57□□□□□ -1.84
SSO2YMR183C TAE1P38340 232 aa3.57□□□□□ -1.84
SSO2YMR183C YMR262WP38430 313 aa3.57□□□□□ -1.84
SSO2YMR183C SIP3P38717 1229 aa3.57□□□□□ -1.84
SSO2YMR183C YHR045WP38775 560 aa3.57□□□□□ -1.84
SSO2YMR183C YIL169CP40442 995 aa3.57□□□□□ -1.84
SSO2YMR183C MSS2P40990 351 aa3.57□□□□□ -1.84
SSO2YMR183C BNA6P43619 295 aa3.57□□□□□ -1.84
SSO2YMR183C PHO86P46956 311 aa3.57□□□□□ -1.84
SSO2YMR183C HIR3P47171 1648 aa3.57□□□□□ -1.84
SSO2YMR183C MNT4P53745 580 aa3.57□□□□□ -1.84
SSO2YMR183C TAF12Q03761 539 aa3.57□□□□□ -1.84
SSO2YMR183C YLR281CQ05863 155 aa3.57□□□□□ -1.84
SSO2YMR183C GRS2Q06817 618 aa3.57□□□□□ -1.84
SSO2YMR183C AAD15Q08361 143 aa3.57□□□□□ -1.84
SSO2YMR183C NRT1Q08485 598 aa3.57□□□□□ -1.84
SSO2YMR183C NDD1Q08887 554 aa3.57□□□□□ -1.84
SSO2YMR183C RDR1Q08904 546 aa3.57□□□□□ -1.84
SSO2YMR183C YLR112WQ12130 139 aa3.57□□□□□ -1.84
SSO2YMR183C BUG1Q12191 341 aa3.57□□□□□ -1.84
SSO2YMR183C NCE102Q12207 173 aaRIP-Chip data3.57□□□□□ -1.84not detected
SSO2YMR183C GIS3Q12418 502 aa3.57□□□□□ -1.84
SSO2YMR183C PEP1P32319 1579 aa3.56□□□□□ -1.84
SSO2YMR183C YLL053CP0CD98 152 aa3.56□□□□□ -1.84
SSO2YMR183C SEC63P14906 663 aa3.56□□□□□ -1.84
SSO2YMR183C CLB2P24869 491 aa3.56□□□□□ -1.84
SSO2YMR183C PRO3P32263 286 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C ATP11P32453 318 aa3.56□□□□□ -1.84
SSO2YMR183C ERG1P32476 496 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C CYS4P32582 507 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C RAD23P32628 398 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C ECT1P33412 323 aa3.56□□□□□ -1.84
SSO2YMR183C MSN2P33748 704 aa3.56□□□□□ -1.84
SSO2YMR183C SPT10P35208 640 aa3.56□□□□□ -1.84
SSO2YMR183C RPC25P35718 212 aa3.56□□□□□ -1.84
SSO2YMR183C RTC2P38279 296 aa3.56□□□□□ -1.84
SSO2YMR183C RTT107P38850 1070 aa3.56□□□□□ -1.84
SSO2YMR183C YHR177WP38867 453 aa3.56□□□□□ -1.84
SSO2YMR183C YER079WP40052 210 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C YJL070CP40361 888 aa3.56□□□□□ -1.84
SSO2YMR183C SYG1P40528 902 aa3.56□□□□□ -1.84
SSO2YMR183C SPG5P42933 373 aa3.56□□□□□ -1.84
SSO2YMR183C LOH1P47055 219 aa3.56□□□□□ -1.84
SSO2YMR183C PYK2P52489 506 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C YNL260CP53846 198 aa3.56□□□□□ -1.84
SSO2YMR183C PGA2P53903 129 aa3.56□□□□□ -1.84
SSO2YMR183C MRP51Q02950 344 aa3.56□□□□□ -1.84
SSO2YMR183C ECI1Q05871 280 aa3.56□□□□□ -1.84
SSO2YMR183C SSQ1Q05931 657 aaPredicted RBP3.56□□□□□ -1.84
SSO2YMR183C ECM7Q06200 448 aa3.56□□□□□ -1.84
SSO2YMR183C ATG26Q06321 1198 aa3.56□□□□□ -1.84
SSO2YMR183C GPN3Q06543 272 aa3.56□□□□□ -1.84
SSO2YMR183C SYO1Q07395 620 aa3.56□□□□□ -1.84
SSO2YMR183C LSP1Q12230 341 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C PKH2Q12236 1081 aaKnown RBP3.56□□□□□ -1.84
SSO2YMR183C APC2Q12440 853 aa3.56□□□□□ -1.84
SSO2YMR183C RMD5Q12508 421 aa3.56□□□□□ -1.84
SSO2YMR183C YER145C-AA0A023PYF4 145 aa3.55□□□□□ -1.84
SSO2YMR183C MES1P00958 751 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C RAD52P06778 471 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C DST1P07273 309 aa3.55□□□□□ -1.84
SSO2YMR183C SNF3P10870 884 aa3.55□□□□□ -1.84
SSO2YMR183C RPI1P23250 407 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C RAD57P25301 460 aa3.55□□□□□ -1.84
SSO2YMR183C CIN8P27895 1000 aa3.55□□□□□ -1.84
SSO2YMR183C MSK1P32048 576 aa3.55□□□□□ -1.84
SSO2YMR183C ASF2P32448 525 aaPredicted RBP3.55□□□□□ -1.84
SSO2YMR183C YKR015CP36111 568 aa3.55□□□□□ -1.84
SSO2YMR183C RPC37P36121 282 aa3.55□□□□□ -1.84
SSO2YMR183C ROT2P38138 954 aa3.55□□□□□ -1.84
SSO2YMR183C STP2P38704 541 aa3.55□□□□□ -1.84
SSO2YMR183C CCT2P39076 527 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C YER085CP40058 173 aa3.55□□□□□ -1.84
SSO2YMR183C SEC9P40357 651 aa3.55□□□□□ -1.84
SSO2YMR183C SHQ1P40486 507 aaPredicted RBP3.55□□□□□ -1.84
SSO2YMR183C SAS2P40963 338 aa3.55□□□□□ -1.84
SSO2YMR183C YJR011CP47086 261 aaPredicted RBP3.55□□□□□ -1.84
SSO2YMR183C TIM21P53220 239 aa3.55□□□□□ -1.84
SSO2YMR183C SMM1P53720 384 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C YIF1P53845 314 aaKnown RBP3.55□□□□□ -1.84
SSO2YMR183C DSL1P53847 754 aa3.55□□□□□ -1.84
SSO2YMR183C BET4Q00618 327 aa3.55□□□□□ -1.84
SSO2YMR183C SHR3Q02774 210 aa3.55□□□□□ -1.84
SSO2YMR183C GIP3Q03016 1276 aa3.55□□□□□ -1.84
SSO2YMR183C IZH1Q03419 316 aa3.55□□□□□ -1.84
SSO2YMR183C HSP31Q04432 237 aa3.55□□□□□ -1.84
SSO2YMR183C YOR365CQ08844 703 aa3.55□□□□□ -1.84
SSO2YMR183C BTS1Q12051 335 aa3.55□□□□□ -1.84
SSO2YMR183C YDR262WQ12331 272 aa3.55□□□□□ -1.84
SSO2YMR183C ARG4P04076 463 aaPredicted RBP3.54□□□□□ -1.84
SSO2YMR183C CHS1P08004 1131 aa3.54□□□□□ -1.84
SSO2YMR183C CDC23P16522 626 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms