RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W YGK3Q12222 375 aaPredicted RBP7.12□□□□□ -1.27
CTF3YLR381W PNO1Q99216 274 aaKnown RBP7.12□□□□□ -1.27
CTF3YLR381W RPL8AP17076 256 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W BUB3P26449 341 aa7.11□□□□□ -1.27
CTF3YLR381W RPL8BP29453 256 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W ERG9P29704 444 aa7.11□□□□□ -1.27
CTF3YLR381W RMA1P36001 430 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W PHO89P38361 574 aa7.11□□□□□ -1.27
CTF3YLR381W PRS3P38689 320 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W YGR168CP53293 376 aa7.11□□□□□ -1.27
CTF3YLR381W KTR6P54070 446 aa7.11□□□□□ -1.27
CTF3YLR381W PPN1Q04119 674 aa7.11□□□□□ -1.27
CTF3YLR381W LCB4Q12246 624 aa7.11□□□□□ -1.27
CTF3YLR381W EFG1Q3E705 233 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W RGS2Q99188 309 aa7.11□□□□□ -1.27
CTF3YLR381W PRP2P20095 876 aaPredicted RBP7.11□□□□□ -1.27
CTF3YLR381W DCC1P25559 380 aa7.11□□□□□ -1.27
CTF3YLR381W SOL2P37262 315 aa7.11□□□□□ -1.27
CTF3YLR381W TAT1P38085 619 aa7.11□□□□□ -1.27
CTF3YLR381W ACO2P39533 789 aa7.11□□□□□ -1.27
CTF3YLR381W LAS21P40367 830 aa7.11□□□□□ -1.27
CTF3YLR381W HXT14P42833 540 aa7.11□□□□□ -1.27
CTF3YLR381W DLD2P46681 530 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W CLA4P48562 842 aa7.11□□□□□ -1.27
CTF3YLR381W YDL183CP48569 320 aa7.11□□□□□ -1.27
CTF3YLR381W NSA1P53136 463 aaPredicted RBP7.11□□□□□ -1.27
CTF3YLR381W RPS15Q01855 142 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W NUP49Q02199 472 aa7.11□□□□□ -1.27
CTF3YLR381W RMT2Q03305 412 aa7.11□□□□□ -1.27
CTF3YLR381W ECM7Q06200 448 aa7.11□□□□□ -1.27
CTF3YLR381W YPL066WQ12194 479 aa7.11□□□□□ -1.27
CTF3YLR381W RTN2Q12443 393 aa7.11□□□□□ -1.27
CTF3YLR381W ERG27Q12452 347 aaKnown RBP7.11□□□□□ -1.27
CTF3YLR381W YPR014CQ6B0W2 109 aa7.11□□□□□ -1.27
CTF3YLR381W FLP1P03870 423 aa7.1□□□□□ -1.27
CTF3YLR381W SPS2P08459 502 aa7.1□□□□□ -1.27
CTF3YLR381W EST1P17214 699 aaPredicted RBP7.1□□□□□ -1.27
CTF3YLR381W RFA1P22336 621 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W TCA17P32613 152 aa7.1□□□□□ -1.27
CTF3YLR381W SOF1P33750 489 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W YBR013CP38215 129 aa7.1□□□□□ -1.27
CTF3YLR381W PPE1P38796 400 aa7.1□□□□□ -1.27
CTF3YLR381W SPL2P38839 148 aa7.1□□□□□ -1.27
CTF3YLR381W DHH1P39517 506 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W SWM2P40342 146 aa7.1□□□□□ -1.27
CTF3YLR381W ARF3P40994 183 aaRIP-Chip data7.1□□□□□ -1.27not detected
CTF3YLR381W RPL10P41805 221 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W BUD32P53323 261 aa7.1□□□□□ -1.27
CTF3YLR381W SSU72P53538 206 aaPredicted RBP7.1□□□□□ -1.27
CTF3YLR381W LSM7P53905 115 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W TRS31Q03337 283 aa7.1□□□□□ -1.27
CTF3YLR381W SSL1Q04673 461 aaPredicted RBP7.1□□□□□ -1.27
CTF3YLR381W YOP1Q12402 180 aa7.1□□□□□ -1.27
CTF3YLR381W TMA7Q3E764 64 aaKnown RBP7.1□□□□□ -1.27
CTF3YLR381W CYC1P00044 109 aaPredicted RBP7.09□□□□□ -1.27
CTF3YLR381W CDC7P06243 507 aa7.09□□□□□ -1.27
CTF3YLR381W GAP1P19145 602 aaPredicted RBP7.09□□□□□ -1.27
CTF3YLR381W GRR1P24814 1151 aa7.09□□□□□ -1.27
CTF3YLR381W CDC20P26309 610 aa7.09□□□□□ -1.27
CTF3YLR381W YKL162CP36052 402 aa7.09□□□□□ -1.27
CTF3YLR381W YHR054CP38780 354 aa7.09□□□□□ -1.27
CTF3YLR381W GLR1P41921 483 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W FIG4P42837 879 aa7.09□□□□□ -1.27
CTF3YLR381W AAD10P47182 288 aa7.09□□□□□ -1.27
CTF3YLR381W RTA1P53047 317 aa7.09□□□□□ -1.27
CTF3YLR381W PKP2P53170 491 aa7.09□□□□□ -1.27
CTF3YLR381W UBP16Q02863 499 aa7.09□□□□□ -1.27
CTF3YLR381W PEX12Q04370 399 aa7.09□□□□□ -1.27
CTF3YLR381W NMD4Q12129 218 aa7.09□□□□□ -1.27
CTF3YLR381W YLR126CQ12288 251 aa7.09□□□□□ -1.27
CTF3YLR381W PST2Q12335 198 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W RPL31AP0C2H8 113 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W RPL31BP0C2H9 113 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W CKS1P20486 150 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W PRE1P22141 198 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W RPI1P23250 407 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W AAT2P23542 418 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W LAC1P28496 418 aa7.09□□□□□ -1.27
CTF3YLR381W ACB1P31787 87 aa7.09□□□□□ -1.27
CTF3YLR381W YKR051WP36142 418 aa7.09□□□□□ -1.27
CTF3YLR381W MRPL36P36531 177 aa7.09□□□□□ -1.27
CTF3YLR381W ATM1P40416 690 aa7.09□□□□□ -1.27
CTF3YLR381W AMA1P50082 593 aa7.09□□□□□ -1.27
CTF3YLR381W DIA3P52290 468 aa7.09□□□□□ -1.27
CTF3YLR381W SPR6Q01684 191 aa7.09□□□□□ -1.27
CTF3YLR381W ODC1Q03028 310 aa7.09□□□□□ -1.27
CTF3YLR381W YHC1Q05900 231 aaKnown RBP7.09□□□□□ -1.27
CTF3YLR381W ENT4Q07872 247 aa7.09□□□□□ -1.27
CTF3YLR381W HFI1Q12060 488 aa7.09□□□□□ -1.27
CTF3YLR381W IDP1P21954 428 aaKnown RBP7.08□□□□□ -1.28
CTF3YLR381W MAK31P23059 88 aa7.08□□□□□ -1.28
CTF3YLR381W MNE1P24720 663 aa7.08□□□□□ -1.28
CTF3YLR381W VAC17P25591 423 aa7.08□□□□□ -1.28
CTF3YLR381W AHC2P25649 128 aa7.08□□□□□ -1.28
CTF3YLR381W TRK2P28584 889 aa7.08□□□□□ -1.28
CTF3YLR381W MRPL6P32904 214 aa7.08□□□□□ -1.28
CTF3YLR381W AFG3P39925 761 aa7.08□□□□□ -1.28
CTF3YLR381W MND2P40577 368 aa7.08□□□□□ -1.28
CTF3YLR381W SIP4P46954 829 aa7.08□□□□□ -1.28
CTF3YLR381W NCS6P53088 359 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms