RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C SPC19Q03954 165 aa3.21□□□□□ -1.9
SMD3YLR147C MDM36Q06820 579 aa3.21□□□□□ -1.9
SMD3YLR147C YGK3Q12222 375 aaPredicted RBP3.21□□□□□ -1.9
SMD3YLR147C JID1Q12350 301 aa3.21□□□□□ -1.9
SMD3YLR147C YDL012CQ12489 107 aa3.21□□□□□ -1.9
SMD3YLR147C CAP2P13517 287 aa3.2□□□□□ -1.9
SMD3YLR147C RPB5P20434 215 aa3.2□□□□□ -1.9
SMD3YLR147C CPR2P23285 205 aa3.2□□□□□ -1.9
SMD3YLR147C DPH5P32469 300 aaPredicted RBP3.2□□□□□ -1.9
SMD3YLR147C YKL097CP34245 136 aa3.2□□□□□ -1.9
SMD3YLR147C BNS1P50084 137 aa3.2□□□□□ -1.9
SMD3YLR147C MMT1Q03218 510 aa3.2□□□□□ -1.9
SMD3YLR147C PRP42Q03776 544 aaKnown RBP3.2□□□□□ -1.9
SMD3YLR147C RIF2Q06208 395 aa3.2□□□□□ -1.9
SMD3YLR147C NDE2Q07500 545 aa3.2□□□□□ -1.9
SMD3YLR147C SMF3Q12078 473 aaPredicted RBP3.2□□□□□ -1.9
SMD3YLR147C ATP3P38077 311 aaKnown RBP3.19□□□□□ -1.9
SMD3YLR147C RTC2P38279 296 aa3.19□□□□□ -1.9
SMD3YLR147C STP2P38704 541 aa3.19□□□□□ -1.9
SMD3YLR147C BAT1P38891 393 aaKnown RBP3.19□□□□□ -1.9
SMD3YLR147C TOS3P43637 560 aa3.19□□□□□ -1.9
SMD3YLR147C MST27P53176 234 aa3.19□□□□□ -1.9
SMD3YLR147C VPS54Q12071 889 aa3.19□□□□□ -1.9
SMD3YLR147C NCA2Q12374 616 aa3.19□□□□□ -1.9
SMD3YLR147C CYS4P32582 507 aaKnown RBP3.18□□□□□ -1.9
SMD3YLR147C ZTA1P38230 334 aaKnown RBP3.18□□□□□ -1.9
SMD3YLR147C YHK8P38776 514 aa3.18□□□□□ -1.9
SMD3YLR147C ZIM17P42844 174 aa3.18□□□□□ -1.9
SMD3YLR147C BIR1P47134 954 aa3.18□□□□□ -1.9
SMD3YLR147C TDA1Q03533 586 aa3.18□□□□□ -1.9
SMD3YLR147C AAT2P23542 418 aaKnown RBP3.17□□□□□ -1.9
SMD3YLR147C SPT10P35208 640 aa3.17□□□□□ -1.9
SMD3YLR147C ANR2P36090 516 aaPredicted RBP3.17□□□□□ -1.9
SMD3YLR147C STN1P38960 494 aa3.17□□□□□ -1.9
SMD3YLR147C PTI1P39927 425 aaPredicted RBP3.17□□□□□ -1.9
SMD3YLR147C OXA1P39952 402 aa3.17□□□□□ -1.9
SMD3YLR147C YFR057WP43625 151 aa3.17□□□□□ -1.9
SMD3YLR147C CRH1P53301 507 aa3.17□□□□□ -1.9
SMD3YLR147C RMT2Q03305 412 aa3.17□□□□□ -1.9
SMD3YLR147C RTN1Q04947 295 aaKnown RBP3.17□□□□□ -1.9
SMD3YLR147C UAF30Q08747 228 aa3.17□□□□□ -1.9
SMD3YLR147C DFG10P40526 253 aa3.16□□□□□ -1.9
SMD3YLR147C EGT2P42835 1041 aa3.16□□□□□ -1.9
SMD3YLR147C ATG18P43601 500 aa3.16□□□□□ -1.9
SMD3YLR147C LCB3P47013 409 aa3.16□□□□□ -1.9
SMD3YLR147C AIM24P47127 394 aa3.16□□□□□ -1.9
SMD3YLR147C YMR102CQ03177 834 aa3.16□□□□□ -1.9
SMD3YLR147C AIM32Q04689 311 aa3.16□□□□□ -1.9
SMD3YLR147C YLR456WQ06199 204 aa3.16□□□□□ -1.9
SMD3YLR147C CMS1Q07897 291 aaKnown RBP3.16□□□□□ -1.9
SMD3YLR147C SMC5Q08204 1093 aa3.16□□□□□ -1.9
SMD3YLR147C AEP3Q12089 606 aa3.16□□□□□ -1.9
SMD3YLR147C RUP1Q12242 671 aa3.16□□□□□ -1.9
SMD3YLR147C DST1P07273 309 aa3.15□□□□□ -1.91
SMD3YLR147C PRR1P28708 518 aa3.15□□□□□ -1.91
SMD3YLR147C OLA1P38219 394 aaKnown RBP3.15□□□□□ -1.91
SMD3YLR147C YER079WP40052 210 aaKnown RBP3.15□□□□□ -1.91
SMD3YLR147C YDR341CQ05506 607 aaKnown RBP3.15□□□□□ -1.91
SMD3YLR147C EAF3Q12432 401 aa3.15□□□□□ -1.91
SMD3YLR147C SSC1P0CS90 654 aaKnown RBP3.14□□□□□ -1.91
SMD3YLR147C RIM1P32445 135 aaKnown RBP3.14□□□□□ -1.91
SMD3YLR147C SKN1P33336 771 aa3.14□□□□□ -1.91
SMD3YLR147C MID2P36027 376 aa3.14□□□□□ -1.91
SMD3YLR147C GPI16P38875 610 aa3.14□□□□□ -1.91
SMD3YLR147C HAC1P41546 238 aa3.14□□□□□ -1.91
SMD3YLR147C YGR111WP53265 400 aa3.14□□□□□ -1.91
SMD3YLR147C YET2Q04210 160 aa3.14□□□□□ -1.91
SMD3YLR147C MFG1Q07684 458 aa3.14□□□□□ -1.91
SMD3YLR147C CEX1Q12453 761 aa3.14□□□□□ -1.91
SMD3YLR147C ALG1P16661 449 aa3.13□□□□□ -1.91
SMD3YLR147C MDH1P17505 334 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SMD3YLR147C YEF1P32622 495 aa3.13□□□□□ -1.91
SMD3YLR147C OM14P38325 134 aa3.13□□□□□ -1.91
SMD3YLR147C INM1P38710 295 aa3.13□□□□□ -1.91
SMD3YLR147C MAM33P40513 266 aa3.13□□□□□ -1.91
SMD3YLR147C TOS2P50078 622 aa3.13□□□□□ -1.91
SMD3YLR147C LIP2Q06005 328 aa3.13□□□□□ -1.91
SMD3YLR147C ISA2Q12425 185 aa3.13□□□□□ -1.91
SMD3YLR147C POM152P39685 1337 aa3.13□□□□□ -1.91
SMD3YLR147C CDC21P06785 304 aa3.12□□□□□ -1.91
SMD3YLR147C ATP1P07251 545 aaKnown RBP3.12□□□□□ -1.91
SMD3YLR147C HSP104P31539 908 aaKnown RBP3.12□□□□□ -1.91
SMD3YLR147C DBF4P32325 704 aa3.12□□□□□ -1.91
SMD3YLR147C FAD1P38913 306 aa3.12□□□□□ -1.91
SMD3YLR147C YER186CP40101 306 aa3.12□□□□□ -1.91
SMD3YLR147C MMF1P40185 145 aaKnown RBP3.12□□□□□ -1.91
SMD3YLR147C STE24P47154 453 aa3.12□□□□□ -1.91
SMD3YLR147C PGU1P47180 361 aa3.12□□□□□ -1.91
SMD3YLR147C PIB2P53191 635 aa3.12□□□□□ -1.91
SMD3YLR147C CLD1P53264 445 aa3.12□□□□□ -1.91
SMD3YLR147C YGR117CP53270 476 aa3.12□□□□□ -1.91
SMD3YLR147C LOT6Q07923 191 aa3.12□□□□□ -1.91
SMD3YLR147C RNH203Q12338 110 aa3.12□□□□□ -1.91
SMD3YLR147C NAG1Q8TGN9 163 aa3.12□□□□□ -1.91
SMD3YLR147C PAB1P04147 577 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91 RIP-Chip
SMD3YLR147C PIS1P06197 220 aaKnown RBP3.11□□□□□ -1.91
SMD3YLR147C SPR6Q01684 191 aa3.11□□□□□ -1.91
SMD3YLR147C NSE1Q07913 336 aa3.11□□□□□ -1.91
SMD3YLR147C DNL4Q08387 944 aaPredicted RBP3.11□□□□□ -1.91
SMD3YLR147C YCR024C-BQ3E7Z8 88 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms