RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C NDE2Q07500 545 aa1.47□□□□□ -2.17
RPL40BYKR094C DIS3Q08162 1001 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C SPE3Q12074 293 aaKnown RBP1.47□□□□□ -2.17
RPL40BYKR094C JID1Q12350 301 aa1.47□□□□□ -2.17
RPL40BYKR094C SPO7P18410 259 aa1.46□□□□□ -2.18
RPL40BYKR094C CLN1P20437 546 aa1.46□□□□□ -2.18
RPL40BYKR094C RPI1P23250 407 aaKnown RBP1.46□□□□□ -2.18
RPL40BYKR094C BEM1P29366 551 aa1.46□□□□□ -2.18
RPL40BYKR094C THI2P38141 450 aa1.46□□□□□ -2.18
RPL40BYKR094C SLM4P38247 162 aa1.46□□□□□ -2.18
RPL40BYKR094C GDT1P38301 280 aaPredicted RBP1.46□□□□□ -2.18
RPL40BYKR094C WSS1P38838 269 aa1.46□□□□□ -2.18
RPL40BYKR094C OXA1P39952 402 aa1.46□□□□□ -2.18
RPL40BYKR094C TCB2P48231 1178 aa1.46□□□□□ -2.18
RPL40BYKR094C YPS5P53057 165 aa1.46□□□□□ -2.18
RPL40BYKR094C PIB2P53191 635 aa1.46□□□□□ -2.18
RPL40BYKR094C GIP3Q03016 1276 aa1.46□□□□□ -2.18
RPL40BYKR094C YDR387CQ04162 555 aa1.46□□□□□ -2.18
RPL40BYKR094C DCS1Q06151 350 aa1.46□□□□□ -2.18
RPL40BYKR094C REX4Q08237 289 aa1.46□□□□□ -2.18
RPL40BYKR094C VAM3Q12241 283 aa1.46□□□□□ -2.18
RPL40BYKR094C RHB1P25378 209 aa1.45□□□□□ -2.18
RPL40BYKR094C APE2P32454 952 aaKnown RBP1.45□□□□□ -2.18
RPL40BYKR094C PCF11P39081 626 aaPredicted RBP1.45□□□□□ -2.18
RPL40BYKR094C CAJ1P39101 391 aa1.45□□□□□ -2.18
RPL40BYKR094C YIF1P53845 314 aaKnown RBP1.45□□□□□ -2.18
RPL40BYKR094C ACL4Q03771 387 aa1.45□□□□□ -2.18
RPL40BYKR094C HSP31Q04432 237 aa1.45□□□□□ -2.18
RPL40BYKR094C SMF3Q12078 473 aaPredicted RBP1.45□□□□□ -2.18
RPL40BYKR094C RPN5Q12250 445 aaKnown RBP1.45□□□□□ -2.18
RPL40BYKR094C YDR061WQ12298 539 aa1.45□□□□□ -2.18
RPL40BYKR094C MTR10Q99189 972 aa1.45□□□□□ -2.18
RPL40BYKR094C SAL1D6W196 494 aa1.44□□□□□ -2.18
RPL40BYKR094C TY1B-AO13527 1196 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C HIS4P00815 799 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C STF1P01098 86 aa1.44□□□□□ -2.18
RPL40BYKR094C RIP1P08067 215 aa1.44□□□□□ -2.18
RPL40BYKR094C KRE2P27809 442 aa1.44□□□□□ -2.18
RPL40BYKR094C MSP1P28737 362 aa1.44□□□□□ -2.18
RPL40BYKR094C PUP2P32379 260 aa1.44□□□□□ -2.18
RPL40BYKR094C RIM1P32445 135 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C PRP21P32524 280 aaPredicted RBP1.44□□□□□ -2.18
RPL40BYKR094C ANP1P32629 500 aa1.44□□□□□ -2.18
RPL40BYKR094C RRN10P38204 145 aa1.44□□□□□ -2.18
RPL40BYKR094C OLA1P38219 394 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C ZTA1P38230 334 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C FAD1P38913 306 aa1.44□□□□□ -2.18
RPL40BYKR094C EFM4P40516 257 aa1.44□□□□□ -2.18
RPL40BYKR094C EPL1P43572 832 aa1.44□□□□□ -2.18
RPL40BYKR094C BIR1P47134 954 aa1.44□□□□□ -2.18
RPL40BYKR094C ECM27P47144 725 aa1.44□□□□□ -2.18
RPL40BYKR094C RPT4P53549 437 aaKnown RBP1.44□□□□□ -2.18
RPL40BYKR094C MTQ1P53944 314 aa1.44□□□□□ -2.18
RPL40BYKR094C NUP116Q02630 1113 aa1.44□□□□□ -2.18
RPL40BYKR094C TAP42Q04372 366 aa1.44□□□□□ -2.18
RPL40BYKR094C YLR456WQ06199 204 aa1.44□□□□□ -2.18
RPL40BYKR094C MMR1Q06324 491 aa1.44□□□□□ -2.18
RPL40BYKR094C BUG1Q12191 341 aa1.44□□□□□ -2.18
RPL40BYKR094C FRE6Q12473 712 aa1.44□□□□□ -2.18
RPL40BYKR094C ISN1Q99312 450 aa1.44□□□□□ -2.18
RPL40BYKR094C ARG4P04076 463 aaPredicted RBP1.43□□□□□ -2.18
RPL40BYKR094C SPO12P17123 173 aa1.43□□□□□ -2.18
RPL40BYKR094C TRX1P22217 103 aaKnown RBP1.43□□□□□ -2.18
RPL40BYKR094C PHO84P25297 587 aaKnown RBP1.43□□□□□ -2.18
RPL40BYKR094C SIN4P32259 974 aa1.43□□□□□ -2.18
RPL40BYKR094C SMI1P32566 505 aa1.43□□□□□ -2.18
RPL40BYKR094C DAD2P36162 133 aa1.43□□□□□ -2.18
RPL40BYKR094C YBR056WP38081 501 aa1.43□□□□□ -2.18
RPL40BYKR094C LYS1P38998 373 aaRIP-Chip data1.43□□□□□ -2.18not detected
RPL40BYKR094C POP2P39008 433 aa1.43□□□□□ -2.18
RPL40BYKR094C CCT2P39076 527 aaKnown RBP1.43□□□□□ -2.18
RPL40BYKR094C ALD5P40047 520 aaKnown RBP1.43□□□□□ -2.18
RPL40BYKR094C JLP2P40206 208 aa1.43□□□□□ -2.18
RPL40BYKR094C TFG2P41896 400 aaPredicted RBP1.43□□□□□ -2.18
RPL40BYKR094C YJR011CP47086 261 aaPredicted RBP1.43□□□□□ -2.18
RPL40BYKR094C HMS2P47175 358 aa1.43□□□□□ -2.18
RPL40BYKR094C AZR1P50080 613 aa1.43□□□□□ -2.18
RPL40BYKR094C YGL262WP53054 175 aa1.43□□□□□ -2.18
RPL40BYKR094C YGR016WP53209 190 aa1.43□□□□□ -2.18
RPL40BYKR094C RHO5P53879 331 aaKnown RBP1.43□□□□□ -2.18
RPL40BYKR094C OCA2P53949 197 aa1.43□□□□□ -2.18
RPL40BYKR094C YPL107WQ02873 248 aa1.43□□□□□ -2.18
RPL40BYKR094C TFB5Q3E7C1 72 aaPredicted RBP1.43□□□□□ -2.18
RPL40BYKR094C SCEIP03882 235 aa1.42□□□□□ -2.18
RPL40BYKR094C CDC21P06785 304 aa1.42□□□□□ -2.18
RPL40BYKR094C RPL1AP0CX43 217 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C RPL1BP0CX44 217 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C RAD57P25301 460 aa1.42□□□□□ -2.18
RPL40BYKR094C SLM5P25345 492 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C RRP7P25368 297 aaPredicted RBP1.42□□□□□ -2.18
RPL40BYKR094C PHO91P27514 894 aa1.42□□□□□ -2.18
RPL40BYKR094C HSP104P31539 908 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C SOR1P35497 357 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C LAS1P36146 502 aaPredicted RBP1.42□□□□□ -2.18
RPL40BYKR094C ASC1P38011 319 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C YBL028CP38202 106 aa1.42□□□□□ -2.18
RPL40BYKR094C KAP104P38217 918 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C PFF1P38244 976 aa1.42□□□□□ -2.18
RPL40BYKR094C YER079WP40052 210 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C SER3P40054 469 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms