RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W DOM34P33309 386 aa10.59□□□□□ -0.71
SIM1YIL123W RCY1P39531 840 aa10.59□□□□□ -0.71
SIM1YIL123W NEO1P40527 1151 aa10.59□□□□□ -0.71
SIM1YIL123W UBC9P50623 157 aaPredicted RBP10.59□□□□□ -0.71
SIM1YIL123W RHO4Q00246 291 aa10.59□□□□□ -0.71
SIM1YIL123W RSC9Q03124 581 aa10.59□□□□□ -0.71
SIM1YIL123W BOP2Q06150 570 aa10.59□□□□□ -0.71
SIM1YIL123W YOL107WQ12239 342 aa10.59□□□□□ -0.71
SIM1YIL123W SLH1P53327 1967 aaKnown RBP10.59□□□□□ -0.71
SIM1YIL123W FMP46P36141 133 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W BIG1P38813 335 aa10.58□□□□□ -0.72
SIM1YIL123W AST2P39945 430 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W SOK1P40317 901 aa10.58□□□□□ -0.72
SIM1YIL123W SNM1P40993 198 aa10.58□□□□□ -0.72
SIM1YIL123W MRPS18P42847 217 aa10.58□□□□□ -0.72
SIM1YIL123W KRE28Q04431 385 aa10.58□□□□□ -0.72
SIM1YIL123W ISR1Q06098 443 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W YLR345WQ06137 509 aa10.58□□□□□ -0.72
SIM1YIL123W MCM21Q06675 368 aa10.58□□□□□ -0.72
SIM1YIL123W FMP45Q07651 309 aa10.58□□□□□ -0.72
SIM1YIL123W NTG2Q08214 380 aa10.58□□□□□ -0.72
SIM1YIL123W DCI1Q08558 271 aa10.58□□□□□ -0.72
SIM1YIL123W YPL066WQ12194 479 aa10.58□□□□□ -0.72
SIM1YIL123W PNO1Q99216 274 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W PET9P18239 318 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W SLY41P22215 453 aa10.58□□□□□ -0.72
SIM1YIL123W SFA1P32771 386 aa10.58□□□□□ -0.72
SIM1YIL123W OMA1P36163 345 aa10.58□□□□□ -0.72
SIM1YIL123W ELO1P39540 310 aa10.58□□□□□ -0.72
SIM1YIL123W LRO1P40345 661 aa10.58□□□□□ -0.72
SIM1YIL123W MNN10P50108 393 aaKnown RBP10.58□□□□□ -0.72
SIM1YIL123W NIS1P53939 407 aa10.58□□□□□ -0.72
SIM1YIL123W YML096WQ04489 525 aa10.58□□□□□ -0.72
SIM1YIL123W YFT2Q06676 274 aa10.58□□□□□ -0.72
SIM1YIL123W DIN7Q12086 430 aa10.58□□□□□ -0.72
SIM1YIL123W BSC1Q12140 328 aa10.58□□□□□ -0.72
SIM1YIL123W ENA1P13587 1091 aa10.57□□□□□ -0.72
SIM1YIL123W TFS1P14306 219 aa10.57□□□□□ -0.72
SIM1YIL123W SUI1P32911 108 aaKnown RBP10.57□□□□□ -0.72
SIM1YIL123W OAR1P35731 278 aa10.57□□□□□ -0.72
SIM1YIL123W TUL1P36096 758 aa10.57□□□□□ -0.72
SIM1YIL123W LYS1P38998 373 aaRIP-Chip data10.57□□□□□ -0.72 RIP-Chip
SIM1YIL123W HXT16P47185 567 aa10.57□□□□□ -0.72
SIM1YIL123W TWF1P53250 332 aa10.57□□□□□ -0.72
SIM1YIL123W SWS2P53937 143 aa10.57□□□□□ -0.72
SIM1YIL123W ENA2Q01896 1091 aa10.57□□□□□ -0.72
SIM1YIL123W EGD1Q02642 157 aaKnown RBP10.57□□□□□ -0.72
SIM1YIL123W TFB3Q03290 321 aa10.57□□□□□ -0.72
SIM1YIL123W YMD8Q03697 442 aa10.57□□□□□ -0.72
SIM1YIL123W YDR444WQ04093 687 aa10.57□□□□□ -0.72
SIM1YIL123W GAL83Q04739 417 aa10.57□□□□□ -0.72
SIM1YIL123W RNH1Q04740 348 aa10.57□□□□□ -0.72
SIM1YIL123W YDL114WQ07530 308 aa10.57□□□□□ -0.72
SIM1YIL123W ENA5Q12691 1091 aa10.57□□□□□ -0.72
SIM1YIL123W LAG2Q92325 660 aa10.57□□□□□ -0.72
SIM1YIL123W REP1P03871 373 aa10.56□□□□□ -0.72
SIM1YIL123W RPC40P07703 335 aaKnown RBP10.56□□□□□ -0.72
SIM1YIL123W VPS33P20795 691 aa10.56□□□□□ -0.72
SIM1YIL123W ITR2P30606 609 aa10.56□□□□□ -0.72
SIM1YIL123W HBS1P32769 611 aaKnown RBP10.56□□□□□ -0.72
SIM1YIL123W CDC13P32797 924 aaKnown RBP10.56□□□□□ -0.72
SIM1YIL123W YPK3P38070 525 aa10.56□□□□□ -0.72
SIM1YIL123W AMN1P38285 549 aaPredicted RBP10.56□□□□□ -0.72
SIM1YIL123W FHN1P53279 174 aa10.56□□□□□ -0.72
SIM1YIL123W GRX5Q02784 150 aa10.56□□□□□ -0.72
SIM1YIL123W RRP17Q04031 235 aaPredicted RBP10.56□□□□□ -0.72
SIM1YIL123W RSF1Q05043 376 aa10.56□□□□□ -0.72
SIM1YIL123W RQC1Q05468 723 aaKnown RBP10.56□□□□□ -0.72
SIM1YIL123W RPN8Q08723 338 aaKnown RBP10.56□□□□□ -0.72
SIM1YIL123W YGK3Q12222 375 aaPredicted RBP10.56□□□□□ -0.72
SIM1YIL123W YKL033W-AQ86ZR7 236 aa10.56□□□□□ -0.72
SIM1YIL123W BEM2P39960 2167 aaKnown RBP10.55□□□□□ -0.72
SIM1YIL123W SEC2P17065 759 aa10.55□□□□□ -0.72
SIM1YIL123W NPR1P22211 790 aa10.55□□□□□ -0.72
SIM1YIL123W MGR1P25573 417 aa10.55□□□□□ -0.72
SIM1YIL123W SKN1P33336 771 aa10.55□□□□□ -0.72
SIM1YIL123W TEF4P36008 412 aaKnown RBP10.55□□□□□ -0.72
SIM1YIL123W CEM1P39525 442 aa10.55□□□□□ -0.72
SIM1YIL123W SWP82P43554 623 aa10.55□□□□□ -0.72
SIM1YIL123W YGR168CP53293 376 aa10.55□□□□□ -0.72
SIM1YIL123W RNH202Q05635 350 aa10.55□□□□□ -0.72
SIM1YIL123W EMG1Q06287 252 aaKnown RBP10.55□□□□□ -0.72
SIM1YIL123W YOR389WQ08912 624 aa10.55□□□□□ -0.72
SIM1YIL123W GLO4Q12320 285 aa10.55□□□□□ -0.72
SIM1YIL123W PTP1P25044 335 aa10.54□□□□□ -0.72
SIM1YIL123W EHT1P38295 451 aa10.54□□□□□ -0.72
SIM1YIL123W CTF8P38877 133 aa10.54□□□□□ -0.72
SIM1YIL123W RRG9P40156 214 aa10.54□□□□□ -0.72
SIM1YIL123W MET28P40573 187 aa10.54□□□□□ -0.72
SIM1YIL123W HOS2P53096 452 aaPredicted RBP10.54□□□□□ -0.72
SIM1YIL123W CDH1P53197 566 aa10.54□□□□□ -0.72
SIM1YIL123W TPS1Q00764 495 aaKnown RBP10.54□□□□□ -0.72
SIM1YIL123W YSA1Q01976 231 aa10.54□□□□□ -0.72
SIM1YIL123W THI73Q07904 523 aa10.54□□□□□ -0.72
SIM1YIL123W IRC13Q08630 104 aa10.54□□□□□ -0.72
SIM1YIL123W MMT2Q08970 484 aa10.54□□□□□ -0.72
SIM1YIL123W YTM1Q12024 460 aaPredicted RBP10.54□□□□□ -0.72
SIM1YIL123W IES3Q12345 250 aa10.54□□□□□ -0.72
SIM1YIL123W SKS1Q12505 502 aa10.54□□□□□ -0.72
SIM1YIL123W SIR3P06701 978 aa10.53□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms