RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeast

Gene SPO16, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO16	YHR153C	HER2	Q03557	464 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	PPM1	Q04081	328 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	YDR341C	Q05506	607 aa	Known RBP	4.26	□□□□□ -1.73
SPO16	YHR153C	PBA1	Q05778	276 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	TLG2	Q08144	397 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	SNX3	Q08826	162 aa	Known RBP	4.26	□□□□□ -1.73
SPO16	YHR153C	SRL2	Q12020	392 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	VTH1	P40438	1549 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	VTH2	P40890	1549 aa		4.26	□□□□□ -1.73
SPO16	YHR153C	SPO12	P17123	173 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	SLY1	P22213	666 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	ITR1	P30605	584 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	RIM1	P32445	135 aa	Known RBP	4.25	□□□□□ -1.73
SPO16	YHR153C	MUD1	P32605	298 aa	Known RBP	4.25	□□□□□ -1.73
SPO16	YHR153C	MDL1	P33310	695 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	LCB2	P40970	561 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	WWM1	P43582	211 aa	Known RBP	4.25	□□□□□ -1.73
SPO16	YHR153C	YPI1	P43587	155 aa		4.25	□□□□□ -1.73
SPO16	YHR153C	RRP9	Q06506	573 aa	Known RBP	4.25	□□□□□ -1.73
SPO16	YHR153C	TPT1	Q12272	230 aa	Known RBP	4.25	□□□□□ -1.73
SPO16	YHR153C	SNT2	P53127	1403 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	COX3	P00420	269 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	PDE2	P06776	526 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	DEG1	P31115	442 aa	Known RBP	4.24	□□□□□ -1.73
SPO16	YHR153C	CYS4	P32582	507 aa	Known RBP	4.24	□□□□□ -1.73
SPO16	YHR153C	FAD1	P38913	306 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	STN1	P38960	494 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	YIL067C	P40514	678 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	SFH5	P47008	294 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	AZR1	P50080	613 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	BTN2	P53286	410 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	SCW10	Q04951	389 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	BCH1	Q05029	724 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	NDE2	Q07500	545 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	RPN5	Q12250	445 aa	Known RBP	4.24	□□□□□ -1.73
SPO16	YHR153C	ERV2	Q12284	196 aa		4.24	□□□□□ -1.73
SPO16	YHR153C	SNU66	Q12420	587 aa	Predicted RBP	4.24	□□□□□ -1.73
SPO16	YHR153C	PAR32	Q12515	295 aa	Known RBP	4.24	□□□□□ -1.73
SPO16	YHR153C	ARO3	P14843	370 aa	Known RBP	4.23	□□□□□ -1.73
SPO16	YHR153C	MNE1	P24720	663 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	PUP2	P32379	260 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	HEL1	P36113	551 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	ATP3	P38077	311 aa	Known RBP	4.23	□□□□□ -1.73
SPO16	YHR153C	AVT5	P38176	459 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	NDT80	P38830	627 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	PRM5	P40476	318 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	NCA3	P46955	337 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	HXT11	P54862	567 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	ELP3	Q02908	557 aa	Known RBP	4.23	□□□□□ -1.73
SPO16	YHR153C	SMA2	Q04658	369 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	NDL1	Q06568	189 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	TSR1	Q07381	788 aa	Known RBP	4.23	□□□□□ -1.73
SPO16	YHR153C	NSE1	Q07913	336 aa		4.23	□□□□□ -1.73
SPO16	YHR153C	SMC4	Q12267	1418 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	CDC21	P06785	304 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	IMA3	P0CW40	589 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	IMA4	P0CW41	589 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	RRP1	P35178	278 aa	Predicted RBP	4.22	□□□□□ -1.73
SPO16	YHR153C	PTH1	P38876	190 aa	Known RBP	4.22	□□□□□ -1.73
SPO16	YHR153C	SEC28	P40509	296 aa	Known RBP	4.22	□□□□□ -1.73
SPO16	YHR153C	REE1	P40893	198 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	PHB2	P50085	310 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	PIB2	P53191	635 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	TOF1	P53840	1238 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	RHO5	P53879	331 aa	Known RBP	4.22	□□□□□ -1.73
SPO16	YHR153C	STD1	Q02794	444 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	YDR541C	Q03049	344 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	IMA2	Q08295	589 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	IQG1	Q12280	1495 aa		4.22	□□□□□ -1.73
SPO16	YHR153C	DST1	P07273	309 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	RPL1A	P0CX43	217 aa	Known RBP	4.21	□□□□□ -1.74
SPO16	YHR153C	RPL1B	P0CX44	217 aa	Known RBP	4.21	□□□□□ -1.74
SPO16	YHR153C	ALG1	P16661	449 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	GDT1	P38301	280 aa	Predicted RBP	4.21	□□□□□ -1.74
SPO16	YHR153C	YER079W	P40052	210 aa	Known RBP	4.21	□□□□□ -1.74
SPO16	YHR153C	YGR210C	P42942	411 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	RAX1	Q08760	435 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	YOR387C	Q08910	206 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	MYO4	P32492	1471 aa		4.21	□□□□□ -1.74
SPO16	YHR153C	ARO1	P08566	1588 aa	Known RBP	4.2	□□□□□ -1.74
SPO16	YHR153C	BLI1	P35727	113 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	YBR139W	P38109	508 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	INM1	P38710	295 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	JLP2	P40206	208 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	ERO1	Q03103	563 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	BUD3	P25558	1636 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	GDB1	Q06625	1536 aa		4.2	□□□□□ -1.74
SPO16	YHR153C	YBR137W	P38276	179 aa		4.19	□□□□□ -1.74
SPO16	YHR153C	YAP3	P38749	330 aa		4.19	□□□□□ -1.74
SPO16	YHR153C	MMF1	P40185	145 aa	Known RBP	4.19	□□□□□ -1.74
SPO16	YHR153C	PAC11	P40960	533 aa		4.19	□□□□□ -1.74
SPO16	YHR153C	PRP3	Q03338	469 aa	Predicted RBP	4.19	□□□□□ -1.74
SPO16	YHR153C	SNT309	Q06091	175 aa	Predicted RBP	4.19	□□□□□ -1.74
SPO16	YHR153C	RSA1	Q08932	381 aa		4.19	□□□□□ -1.74
SPO16	YHR153C	USO1	P25386	1790 aa		4.18	□□□□□ -1.74
SPO16	YHR153C	TRP1	P00912	224 aa		4.18	□□□□□ -1.74
SPO16	YHR153C	DAL2	P25335	343 aa		4.18	□□□□□ -1.74
SPO16	YHR153C	YCL068C	P25593	260 aa		4.18	□□□□□ -1.74
SPO16	YHR153C	PHO91	P27514	894 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms