RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W GCS1P35197 352 aa3.33□□□□□ -1.88
BCD1YHR040W VPS21P36017 210 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W ALY1P36117 915 aa3.33□□□□□ -1.88
BCD1YHR040W CAF4P36130 643 aa3.33□□□□□ -1.88
BCD1YHR040W SRO77P38163 1010 aa3.33□□□□□ -1.88
BCD1YHR040W RFS1P38234 210 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W YHR112CP38716 378 aa3.33□□□□□ -1.88
BCD1YHR040W EFM1P38732 585 aa3.33□□□□□ -1.88
BCD1YHR040W YHR131CP38835 850 aa3.33□□□□□ -1.88
BCD1YHR040W MSS4P38994 779 aa3.33□□□□□ -1.88
BCD1YHR040W EXO1P39875 702 aa3.33□□□□□ -1.88
BCD1YHR040W RPH1P39956 796 aa3.33□□□□□ -1.88
BCD1YHR040W YEL057CP39983 233 aa3.33□□□□□ -1.88
BCD1YHR040W JHD1P40034 492 aa3.33□□□□□ -1.88
BCD1YHR040W SLZ1P40167 298 aa3.33□□□□□ -1.88
BCD1YHR040W YNL195CP40168 261 aa3.33□□□□□ -1.88
BCD1YHR040W YRB1P41920 201 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W SSU1P41930 458 aa3.33□□□□□ -1.88
BCD1YHR040W COS4P43542 379 aa3.33□□□□□ -1.88
BCD1YHR040W FMP32P43557 207 aa3.33□□□□□ -1.88
BCD1YHR040W YFR018CP43599 363 aa3.33□□□□□ -1.88
BCD1YHR040W EMC2P47133 292 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W GTO1P48239 356 aa3.33□□□□□ -1.88
BCD1YHR040W GLO1P50107 326 aa3.33□□□□□ -1.88
BCD1YHR040W COX18P53239 316 aa3.33□□□□□ -1.88
BCD1YHR040W YGR066CP53242 292 aa3.33□□□□□ -1.88
BCD1YHR040W ART5P53244 586 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W GND2P53319 492 aa3.33□□□□□ -1.88
BCD1YHR040W GOR1P53839 350 aa3.33□□□□□ -1.88
BCD1YHR040W YNL143CP53908 130 aa3.33□□□□□ -1.88
BCD1YHR040W IDP3P53982 420 aaKnown RBP3.33□□□□□ -1.88
BCD1YHR040W OAZ1Q02803 292 aa3.33□□□□□ -1.88
BCD1YHR040W PIR3Q03180 325 aa3.33□□□□□ -1.88
BCD1YHR040W HOT1Q03213 719 aa3.33□□□□□ -1.88
BCD1YHR040W YET2Q04210 160 aa3.33□□□□□ -1.88
BCD1YHR040W PEX12Q04370 399 aa3.33□□□□□ -1.88
BCD1YHR040W YPR114WQ06107 315 aa3.33□□□□□ -1.88
BCD1YHR040W CRN1Q06440 651 aa3.33□□□□□ -1.88
BCD1YHR040W BUD7Q08754 746 aa3.33□□□□□ -1.88
BCD1YHR040W YLR049CQ12110 428 aa3.33□□□□□ -1.88
BCD1YHR040W UBX3Q12229 455 aa3.33□□□□□ -1.88
BCD1YHR040W LCB4Q12246 624 aa3.33□□□□□ -1.88
BCD1YHR040W PSY3Q12318 242 aa3.33□□□□□ -1.88
BCD1YHR040W YJR112W-AQ3E743 109 aa3.33□□□□□ -1.88
BCD1YHR040W YOL159C-AQ3E769 90 aa3.33□□□□□ -1.88
BCD1YHR040W YOR338WQ99326 363 aa3.33□□□□□ -1.88
BCD1YHR040W MOT1P32333 1867 aa3.33□□□□□ -1.88
BCD1YHR040W DFR1P07807 211 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
BCD1YHR040W MDH1P17505 334 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
BCD1YHR040W GLK1P17709 500 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W ART10P18634 518 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W PMA2P19657 947 aa3.32□□□□□ -1.88
BCD1YHR040W CCA1P21269 546 aa3.32□□□□□ -1.88
BCD1YHR040W PUP3P25451 205 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W SPB1P25582 841 aaPredicted RBP3.32□□□□□ -1.88
BCD1YHR040W YCR099CP25657 155 aa3.32□□□□□ -1.88
BCD1YHR040W APE2P32454 952 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W PTM1P32857 523 aa3.32□□□□□ -1.88
BCD1YHR040W PRP18P33411 251 aaPredicted RBP3.32□□□□□ -1.88
BCD1YHR040W TIP20P33891 701 aa3.32□□□□□ -1.88
BCD1YHR040W YCR087C-AP37263 153 aa3.32□□□□□ -1.88
BCD1YHR040W YBR056WP38081 501 aa3.32□□□□□ -1.88
BCD1YHR040W SLM4P38247 162 aa3.32□□□□□ -1.88
BCD1YHR040W RPP1P38786 293 aa3.32□□□□□ -1.88
BCD1YHR040W UBA4P38820 440 aa3.32□□□□□ -1.88
BCD1YHR040W DHH1P39517 506 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W ARB1P40024 610 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W YIL161WP40449 235 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W AYR1P40471 297 aa3.32□□□□□ -1.88
BCD1YHR040W GCD10P41814 478 aa3.32□□□□□ -1.88
BCD1YHR040W GCN20P43535 752 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W AGP3P43548 558 aa3.32□□□□□ -1.88
BCD1YHR040W SHE4P51534 789 aa3.32□□□□□ -1.88
BCD1YHR040W TIM13P53299 105 aa3.32□□□□□ -1.88
BCD1YHR040W YNR068CP53754 272 aa3.32□□□□□ -1.88
BCD1YHR040W YNL260CP53846 198 aa3.32□□□□□ -1.88
BCD1YHR040W INN1P53901 409 aa3.32□□□□□ -1.88
BCD1YHR040W EOS1P53938 366 aa3.32□□□□□ -1.88
BCD1YHR040W YPL014WQ02606 381 aa3.32□□□□□ -1.88
BCD1YHR040W HER2Q03557 464 aa3.32□□□□□ -1.88
BCD1YHR040W EFR3Q03653 782 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W YMR206WQ03695 313 aa3.32□□□□□ -1.88
BCD1YHR040W TAF12Q03761 539 aa3.32□□□□□ -1.88
BCD1YHR040W GRS2Q06817 618 aa3.32□□□□□ -1.88
BCD1YHR040W YLL007CQ07799 665 aa3.32□□□□□ -1.88
BCD1YHR040W YEH2Q07950 538 aa3.32□□□□□ -1.88
BCD1YHR040W RSA1Q08932 381 aa3.32□□□□□ -1.88
BCD1YHR040W REX3Q12090 404 aa3.32□□□□□ -1.88
BCD1YHR040W LYS21Q12122 440 aaKnown RBP3.32□□□□□ -1.88
BCD1YHR040W NFI1Q12216 726 aa3.32□□□□□ -1.88
BCD1YHR040W ICT1Q12385 394 aa3.32□□□□□ -1.88
BCD1YHR040W PEX11Q12462 236 aa3.32□□□□□ -1.88
BCD1YHR040W YPL247CQ12523 523 aa3.32□□□□□ -1.88
BCD1YHR040W LAA1P39526 2014 aa3.31□□□□□ -1.88
BCD1YHR040W RIF1P29539 1916 aa3.31□□□□□ -1.88
BCD1YHR040W CET1O13297 549 aaPredicted RBP3.31□□□□□ -1.88
BCD1YHR040W GPH1P06738 902 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W CPA1P07258 411 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W TUB1P09733 447 aaKnown RBP3.31□□□□□ -1.88
BCD1YHR040W MRP13P12686 339 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 166.3 ms