RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W ROG1P53118 685 aa2.3□□□□□ -2.04
SPF1YEL031W IMO32P53219 342 aa2.3□□□□□ -2.04
SPF1YEL031W SHY1P53266 389 aa2.3□□□□□ -2.04
SPF1YEL031W SAY1P53324 424 aa2.3□□□□□ -2.04
SPF1YEL031W YGR283CP53336 341 aaPredicted RBP2.3□□□□□ -2.04
SPF1YEL031W NRK1P53915 240 aa2.3□□□□□ -2.04
SPF1YEL031W YSA1Q01976 231 aa2.3□□□□□ -2.04
SPF1YEL031W ARL3Q02804 198 aa2.3□□□□□ -2.04
SPF1YEL031W MRPS17Q03246 237 aaPredicted RBP2.3□□□□□ -2.04
SPF1YEL031W DCR2Q05924 578 aa2.3□□□□□ -2.04
SPF1YEL031W YLR455WQ06188 304 aa2.3□□□□□ -2.04
SPF1YEL031W AAD4Q07747 329 aa2.3□□□□□ -2.04
SPF1YEL031W YOL159CQ08300 171 aa2.3□□□□□ -2.04
SPF1YEL031W MCA1Q08601 432 aa2.3□□□□□ -2.04
SPF1YEL031W NUS1Q12063 375 aa2.3□□□□□ -2.04
SPF1YEL031W WTM1Q12363 437 aaKnown RBP2.3□□□□□ -2.04
SPF1YEL031W NDJ1Q12366 352 aa2.3□□□□□ -2.04
SPF1YEL031W RMD5Q12508 421 aa2.3□□□□□ -2.04
SPF1YEL031W SUC2P00724 532 aa2.29□□□□□ -2.04
SPF1YEL031W SSA3P09435 649 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W NHP6BP11633 99 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W SNF6P18888 332 aa2.29□□□□□ -2.04
SPF1YEL031W SEC59P20048 519 aa2.29□□□□□ -2.04
SPF1YEL031W PRP2P20095 876 aaPredicted RBP2.29□□□□□ -2.04
SPF1YEL031W UTR1P21373 530 aa2.29□□□□□ -2.04
SPF1YEL031W APN1P22936 367 aa2.29□□□□□ -2.04
SPF1YEL031W PTP1P25044 335 aa2.29□□□□□ -2.04
SPF1YEL031W PBN1P25580 416 aa2.29□□□□□ -2.04
SPF1YEL031W SPO23P33757 523 aa2.29□□□□□ -2.04
SPF1YEL031W MKS1P34072 584 aa2.29□□□□□ -2.04
SPF1YEL031W COS9P36034 407 aa2.29□□□□□ -2.04
SPF1YEL031W AVT5P38176 459 aa2.29□□□□□ -2.04
SPF1YEL031W RRP3P38712 501 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W NDT80P38830 627 aa2.29□□□□□ -2.04
SPF1YEL031W HRB1P38922 454 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SPF1YEL031W ERV46P39727 415 aa2.29□□□□□ -2.04
SPF1YEL031W RRG9P40156 214 aa2.29□□□□□ -2.04
SPF1YEL031W RFC4P40339 323 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W NET1P47035 1189 aa2.29□□□□□ -2.04
SPF1YEL031W JJJ3P47138 172 aa2.29□□□□□ -2.04
SPF1YEL031W RPS7BP48164 190 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W ERV14P53173 138 aa2.29□□□□□ -2.04
SPF1YEL031W RNH70P53331 553 aa2.29□□□□□ -2.04
SPF1YEL031W CAF120P53836 1060 aa2.29□□□□□ -2.04
SPF1YEL031W MRPL22P53881 309 aa2.29□□□□□ -2.04
SPF1YEL031W ASI3P53983 676 aa2.29□□□□□ -2.04
SPF1YEL031W SDH1Q00711 640 aa2.29□□□□□ -2.04
SPF1YEL031W CWC27Q02770 301 aa2.29□□□□□ -2.04
SPF1YEL031W YMR087WQ04299 284 aa2.29□□□□□ -2.04
SPF1YEL031W ERF2Q06551 359 aa2.29□□□□□ -2.04
SPF1YEL031W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SPF1YEL031W YDR056CQ12025 205 aa2.29□□□□□ -2.04
SPF1YEL031W BTS1Q12051 335 aa2.29□□□□□ -2.04
SPF1YEL031W SET6Q12529 373 aa2.29□□□□□ -2.04
SPF1YEL031W PCC1Q3E833 88 aa2.29□□□□□ -2.04
SPF1YEL031W CDC28P00546 298 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W FUM1P08417 488 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W ERD1P16151 362 aa2.29□□□□□ -2.04
SPF1YEL031W ZRC1P20107 442 aa2.29□□□□□ -2.04
SPF1YEL031W KIN82P25341 720 aa2.29□□□□□ -2.04
SPF1YEL031W DOA4P32571 926 aa2.29□□□□□ -2.04
SPF1YEL031W LOT5P34234 306 aa2.29□□□□□ -2.04
SPF1YEL031W LST4P34239 828 aa2.29□□□□□ -2.04
SPF1YEL031W YKL162CP36052 402 aa2.29□□□□□ -2.04
SPF1YEL031W CCZ1P38273 704 aa2.29□□□□□ -2.04
SPF1YEL031W PRS3P38689 320 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W STB5P38699 743 aa2.29□□□□□ -2.04
SPF1YEL031W YHL041WP38730 149 aa2.29□□□□□ -2.04
SPF1YEL031W YHR035WP38769 630 aa2.29□□□□□ -2.04
SPF1YEL031W RRP4P38792 359 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W SUR2P38992 349 aa2.29□□□□□ -2.04
SPF1YEL031W HPA3P39979 161 aa2.29□□□□□ -2.04
SPF1YEL031W ARF3P40994 183 aaRIP-Chip data2.29□□□□□ -2.04not detected
SPF1YEL031W FKH2P41813 862 aa2.29□□□□□ -2.04
SPF1YEL031W CAF16P43569 289 aa2.29□□□□□ -2.04
SPF1YEL031W RPA34P47006 233 aaPredicted RBP2.29□□□□□ -2.04
SPF1YEL031W MRX5P47007 382 aa2.29□□□□□ -2.04
SPF1YEL031W TIM54P47045 478 aa2.29□□□□□ -2.04
SPF1YEL031W YJL016WP47072 561 aa2.29□□□□□ -2.04
SPF1YEL031W STR3P53101 465 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W PRM8P53174 237 aa2.29□□□□□ -2.04
SPF1YEL031W APP1P53933 587 aa2.29□□□□□ -2.04
SPF1YEL031W NGL2Q03264 515 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W YML037CQ03703 340 aa2.29□□□□□ -2.04
SPF1YEL031W YMR160WQ03823 816 aa2.29□□□□□ -2.04
SPF1YEL031W DPB4Q04603 196 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W CRF1Q04930 467 aa2.29□□□□□ -2.04
SPF1YEL031W RBS1Q05672 457 aaKnown RBP2.29□□□□□ -2.04
SPF1YEL031W CRR1Q05790 422 aa2.29□□□□□ -2.04
SPF1YEL031W BLS1Q06071 122 aa2.29□□□□□ -2.04
SPF1YEL031W RAD34Q06665 692 aa2.29□□□□□ -2.04
SPF1YEL031W SSK1Q07084 712 aa2.29□□□□□ -2.04
SPF1YEL031W YEH1Q07804 573 aa2.29□□□□□ -2.04
SPF1YEL031W IES4Q08561 116 aa2.29□□□□□ -2.04
SPF1YEL031W RRG7Q08774 242 aaPredicted RBP2.29□□□□□ -2.04
SPF1YEL031W RDR1Q08904 546 aa2.29□□□□□ -2.04
SPF1YEL031W YLR049CQ12110 428 aa2.29□□□□□ -2.04
SPF1YEL031W SPC3Q12133 184 aa2.29□□□□□ -2.04
SPF1YEL031W YLR126CQ12288 251 aa2.29□□□□□ -2.04
SPF1YEL031W DGK1Q12382 290 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms