RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A RPC17P47076 161 aa3.03□□□□□ -1.92
RIM1YCR028C-A TOF1P53840 1238 aa3.03□□□□□ -1.92
RIM1YCR028C-A YIF1P53845 314 aaKnown RBP3.03□□□□□ -1.92
RIM1YCR028C-A DSL1P53847 754 aa3.03□□□□□ -1.92
RIM1YCR028C-A KTR5P53966 522 aaPredicted RBP3.03□□□□□ -1.92
RIM1YCR028C-A MDM1Q01846 1127 aa3.03□□□□□ -1.92
RIM1YCR028C-A SYF1Q04048 859 aaPredicted RBP3.03□□□□□ -1.92
RIM1YCR028C-A YDR387CQ04162 555 aa3.03□□□□□ -1.92
RIM1YCR028C-A UBX2Q04228 584 aa3.03□□□□□ -1.92
RIM1YCR028C-A YMR114CQ04471 368 aaKnown RBP3.03□□□□□ -1.92
RIM1YCR028C-A CSM3Q04659 317 aa3.03□□□□□ -1.92
RIM1YCR028C-A RRN11Q04712 507 aa3.03□□□□□ -1.92
RIM1YCR028C-A VTA1Q06263 330 aa3.03□□□□□ -1.92
RIM1YCR028C-A YPR078CQ06813 372 aa3.03□□□□□ -1.92
RIM1YCR028C-A TSR1Q07381 788 aaKnown RBP3.03□□□□□ -1.92
RIM1YCR028C-A TAF10Q12030 206 aa3.03□□□□□ -1.92
RIM1YCR028C-A YOL159C-AQ3E769 90 aa3.03□□□□□ -1.92
RIM1YCR028C-A CDC31P06704 161 aaKnown RBP3.02□□□□□ -1.93
RIM1YCR028C-A CKA2P19454 339 aa3.02□□□□□ -1.93
RIM1YCR028C-A PRP21P32524 280 aaPredicted RBP3.02□□□□□ -1.93
RIM1YCR028C-A GCG1P32656 232 aaKnown RBP3.02□□□□□ -1.93
RIM1YCR028C-A NIP100P33420 868 aa3.02□□□□□ -1.93
RIM1YCR028C-A PAD1P33751 242 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
RIM1YCR028C-A RPC25P35718 212 aa3.02□□□□□ -1.93
RIM1YCR028C-A RPC37P36121 282 aa3.02□□□□□ -1.93
RIM1YCR028C-A YCR041WP37265 110 aa3.02□□□□□ -1.93
RIM1YCR028C-A VHC1P38329 1120 aa3.02□□□□□ -1.93
RIM1YCR028C-A NDT80P38830 627 aa3.02□□□□□ -1.93
RIM1YCR028C-A PES4P39684 611 aa3.02□□□□□ -1.93
RIM1YCR028C-A YIL067CP40514 678 aa3.02□□□□□ -1.93
RIM1YCR028C-A YIP1P53039 248 aa3.02□□□□□ -1.93
RIM1YCR028C-A BTN2P53286 410 aa3.02□□□□□ -1.93
RIM1YCR028C-A RET3P53600 189 aa3.02□□□□□ -1.93
RIM1YCR028C-A BNI5P53890 448 aaKnown RBP3.02□□□□□ -1.93
RIM1YCR028C-A URH1Q04179 340 aa3.02□□□□□ -1.93
RIM1YCR028C-A HSP31Q04432 237 aa3.02□□□□□ -1.93
RIM1YCR028C-A SIL1Q08199 421 aa3.02□□□□□ -1.93
RIM1YCR028C-A RTN2Q12443 393 aa3.02□□□□□ -1.93
RIM1YCR028C-A RAD61Q99359 647 aa3.02□□□□□ -1.93
RIM1YCR028C-A DUR1,2P32528 1835 aaKnown RBP3.02□□□□□ -1.93
RIM1YCR028C-A YIL177CP40434 1758 aa3.02□□□□□ -1.93
RIM1YCR028C-A YJL225CP40889 1758 aa3.02□□□□□ -1.93
RIM1YCR028C-A GPH1P06738 902 aaKnown RBP3.01□□□□□ -1.93
RIM1YCR028C-A RAD3P06839 778 aa3.01□□□□□ -1.93
RIM1YCR028C-A SPT15P13393 240 aaKnown RBP3.01□□□□□ -1.93
RIM1YCR028C-A MRPS28P21771 286 aa3.01□□□□□ -1.93
RIM1YCR028C-A SEC14P24280 304 aaKnown RBP3.01□□□□□ -1.93
RIM1YCR028C-A NAM9P27929 486 aa3.01□□□□□ -1.93
RIM1YCR028C-A YIM1P28625 365 aa3.01□□□□□ -1.93
RIM1YCR028C-A ERG3P32353 365 aa3.01□□□□□ -1.93
RIM1YCR028C-A YBL059WP34224 193 aa3.01□□□□□ -1.93
RIM1YCR028C-A HCS1P34243 683 aa3.01□□□□□ -1.93
RIM1YCR028C-A PTK1P36002 662 aaPredicted RBP3.01□□□□□ -1.93
RIM1YCR028C-A HEL1P36113 551 aa3.01□□□□□ -1.93
RIM1YCR028C-A JNM1P36224 373 aa3.01□□□□□ -1.93
RIM1YCR028C-A COS5P47187 383 aa3.01□□□□□ -1.93
RIM1YCR028C-A KAP114P53067 1004 aa3.01□□□□□ -1.93
RIM1YCR028C-A MNP1P53163 194 aaPredicted RBP3.01□□□□□ -1.93
RIM1YCR028C-A MYO5Q04439 1219 aaKnown RBP3.01□□□□□ -1.93
RIM1YCR028C-A SPC24Q04477 213 aa3.01□□□□□ -1.93
RIM1YCR028C-A PBA1Q05778 276 aa3.01□□□□□ -1.93
RIM1YCR028C-A SMD2Q06217 110 aaKnown RBP3.01□□□□□ -1.93
RIM1YCR028C-A YLH47Q06493 454 aa3.01□□□□□ -1.93
RIM1YCR028C-A ESA1Q08649 445 aa3.01□□□□□ -1.93
RIM1YCR028C-A BUG1Q12191 341 aa3.01□□□□□ -1.93
RIM1YCR028C-A YLR108CQ12259 485 aa3.01□□□□□ -1.93
RIM1YCR028C-A SEY1Q99287 776 aa3.01□□□□□ -1.93
RIM1YCR028C-A TUS1Q06412 1307 aa3□□□□□ -1.93
RIM1YCR028C-A HHF1P02309 103 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A ARG4P04076 463 aaPredicted RBP3□□□□□ -1.93
RIM1YCR028C-A REV1P12689 985 aa3□□□□□ -1.93
RIM1YCR028C-A CPR4P25334 318 aa3□□□□□ -1.93
RIM1YCR028C-A APE2P32454 952 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A NIP1P32497 812 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A ECM25P32525 599 aa3□□□□□ -1.93
RIM1YCR028C-A BLI1P35727 113 aa3□□□□□ -1.93
RIM1YCR028C-A RIB5P38145 238 aa3□□□□□ -1.93
RIM1YCR028C-A MIX23P38162 196 aa3□□□□□ -1.93
RIM1YCR028C-A HEK2P38199 381 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
RIM1YCR028C-A CCT2P39076 527 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A OST1P41543 476 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A YFH7P43591 353 aa3□□□□□ -1.93
RIM1YCR028C-A TOS3P43637 560 aa3□□□□□ -1.93
RIM1YCR028C-A DLD2P46681 530 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A IBD2P53892 351 aa3□□□□□ -1.93
RIM1YCR028C-A RPA49Q01080 415 aaPredicted RBP3□□□□□ -1.93
RIM1YCR028C-A ELP3Q02908 557 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A CMS1Q07897 291 aaKnown RBP3□□□□□ -1.93
RIM1YCR028C-A YOL075CQ08234 1294 aa3□□□□□ -1.93
RIM1YCR028C-A HIF1Q12373 385 aa3□□□□□ -1.93
RIM1YCR028C-A NCA2Q12374 616 aa3□□□□□ -1.93
RIM1YCR028C-A RIP1P08067 215 aa2.99□□□□□ -1.93
RIM1YCR028C-A NOP1P15646 327 aaKnown RBP2.99□□□□□ -1.93
RIM1YCR028C-A RPI1P23250 407 aaKnown RBP2.99□□□□□ -1.93
RIM1YCR028C-A CLB3P24870 427 aa2.99□□□□□ -1.93
RIM1YCR028C-A YCR051WP25631 222 aa2.99□□□□□ -1.93
RIM1YCR028C-A TIP1P27654 210 aaPredicted RBP2.99□□□□□ -1.93
RIM1YCR028C-A RML2P32611 393 aa2.99□□□□□ -1.93
RIM1YCR028C-A SDH3P33421 198 aa2.99□□□□□ -1.93
RIM1YCR028C-A RFS1P38234 210 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms