RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W APS3P47064 194 aa5.39□□□□□ -1.55
SHP1YBL058W MUP1P50276 574 aa5.39□□□□□ -1.55
SHP1YBL058W CDH1P53197 566 aa5.39□□□□□ -1.55
SHP1YBL058W YGR079WP53249 370 aa5.39□□□□□ -1.55
SHP1YBL058W MPA43P53583 542 aaPredicted RBP5.39□□□□□ -1.55
SHP1YBL058W SLM2P53955 656 aa5.39□□□□□ -1.55
SHP1YBL058W PFA5Q03289 374 aa5.39□□□□□ -1.55
SHP1YBL058W YOR365CQ08844 703 aa5.39□□□□□ -1.55
SHP1YBL058W TMA46Q12000 345 aaKnown RBP5.39□□□□□ -1.55
SHP1YBL058W RCN2Q12044 265 aa5.39□□□□□ -1.55
SHP1YBL058W BLM10P43583 2143 aa5.39□□□□□ -1.55
SHP1YBL058W RPO26P20435 155 aa5.38□□□□□ -1.55
SHP1YBL058W DIT1P21623 536 aa5.38□□□□□ -1.55
SHP1YBL058W SYP1P25623 870 aaKnown RBP5.38□□□□□ -1.55
SHP1YBL058W PTC6P25646 442 aa5.38□□□□□ -1.55
SHP1YBL058W BUB2P26448 306 aaPredicted RBP5.38□□□□□ -1.55
SHP1YBL058W MSN2P33748 704 aa5.38□□□□□ -1.55
SHP1YBL058W MDJ1P35191 511 aa5.38□□□□□ -1.55
SHP1YBL058W FES1P38260 290 aa5.38□□□□□ -1.55
SHP1YBL058W LSM4P40070 187 aaKnown RBP5.38□□□□□ -1.55
SHP1YBL058W YIL169CP40442 995 aa5.38□□□□□ -1.55
SHP1YBL058W XBP1P40489 647 aa5.38□□□□□ -1.55
SHP1YBL058W CEP3P40969 608 aa5.38□□□□□ -1.55
SHP1YBL058W PTR3P43606 678 aa5.38□□□□□ -1.55
SHP1YBL058W FAR3P46671 204 aa5.38□□□□□ -1.55
SHP1YBL058W RPE1P46969 238 aa5.38□□□□□ -1.55
SHP1YBL058W AIM22P47051 409 aa5.38□□□□□ -1.55
SHP1YBL058W TPC1P53257 314 aa5.38□□□□□ -1.55
SHP1YBL058W CUZ1P53899 274 aa5.38□□□□□ -1.55
SHP1YBL058W YLR460CP54007 376 aa5.38□□□□□ -1.55
SHP1YBL058W IRC15Q02733 499 aa5.38□□□□□ -1.55
SHP1YBL058W YPL107WQ02873 248 aa5.38□□□□□ -1.55
SHP1YBL058W SMA2Q04658 369 aa5.38□□□□□ -1.55
SHP1YBL058W SEI1Q06058 285 aa5.38□□□□□ -1.55
SHP1YBL058W MRL1Q06815 381 aa5.38□□□□□ -1.55
SHP1YBL058W YPR091CQ06833 770 aa5.38□□□□□ -1.55
SHP1YBL058W YRA1Q12159 226 aaKnown RBP5.38□□□□□ -1.55
SHP1YBL058W MDM12Q92328 271 aa5.38□□□□□ -1.55
SHP1YBL058W TY4B-PA0A0B7P3V8 1104 aa5.37□□□□□ -1.55
SHP1YBL058W TRP3P00937 484 aa5.37□□□□□ -1.55
SHP1YBL058W CDC36P06100 191 aaPredicted RBP5.37□□□□□ -1.55
SHP1YBL058W PET111P08468 800 aa5.37□□□□□ -1.55
SHP1YBL058W MAK32P23060 363 aa5.37□□□□□ -1.55
SHP1YBL058W COS111P38308 924 aa5.37□□□□□ -1.55
SHP1YBL058W TRR2P38816 342 aa5.37□□□□□ -1.55
SHP1YBL058W RIX1P38883 763 aaPredicted RBP5.37□□□□□ -1.55
SHP1YBL058W HRB1P38922 454 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SHP1YBL058W SEC31P38968 1273 aaKnown RBP5.37□□□□□ -1.55
SHP1YBL058W AIM2P39721 246 aa5.37□□□□□ -1.55
SHP1YBL058W PFK26P40433 827 aaKnown RBP5.37□□□□□ -1.55
SHP1YBL058W MNN5P46982 586 aa5.37□□□□□ -1.55
SHP1YBL058W ARI1P53111 347 aaKnown RBP5.37□□□□□ -1.55
SHP1YBL058W RNH70P53331 553 aa5.37□□□□□ -1.55
SHP1YBL058W RHO4Q00246 291 aa5.37□□□□□ -1.55
SHP1YBL058W YPL071CQ02864 156 aa5.37□□□□□ -1.55
SHP1YBL058W ATP25Q03153 612 aa5.37□□□□□ -1.55
SHP1YBL058W GIS1Q03833 894 aa5.37□□□□□ -1.55
SHP1YBL058W PLM2Q04383 521 aa5.37□□□□□ -1.55
SHP1YBL058W GAS2Q06135 555 aa5.37□□□□□ -1.55
SHP1YBL058W YLR446WQ06204 433 aa5.37□□□□□ -1.55
SHP1YBL058W YLL007CQ07799 665 aa5.37□□□□□ -1.55
SHP1YBL058W VHS3Q08438 674 aa5.37□□□□□ -1.55
SHP1YBL058W SLF1Q12034 447 aaKnown RBP5.37□□□□□ -1.55
SHP1YBL058W NTO1Q12311 748 aa5.37□□□□□ -1.55
SHP1YBL058W YKL033W-AQ86ZR7 236 aa5.37□□□□□ -1.55
SHP1YBL058W HMG1P12683 1054 aa5.36□□□□□ -1.55
SHP1YBL058W SAC7P17121 654 aa5.36□□□□□ -1.55
SHP1YBL058W ILV6P25605 309 aaKnown RBP5.36□□□□□ -1.55
SHP1YBL058W CWH43P25618 953 aa5.36□□□□□ -1.55
SHP1YBL058W CTS1P29029 562 aa5.36□□□□□ -1.55
SHP1YBL058W ERG9P29704 444 aa5.36□□□□□ -1.55
SHP1YBL058W VPS51P36116 164 aa5.36□□□□□ -1.55
SHP1YBL058W GLG1P36143 616 aa5.36□□□□□ -1.55
SHP1YBL058W FAD1P38913 306 aa5.36□□□□□ -1.55
SHP1YBL058W SHU2P38957 223 aa5.36□□□□□ -1.55
SHP1YBL058W SCS2P40075 244 aaKnown RBP5.36□□□□□ -1.55
SHP1YBL058W SHR5P41912 237 aa5.36□□□□□ -1.55
SHP1YBL058W MAD3P47074 515 aa5.36□□□□□ -1.55
SHP1YBL058W LIA1P47120 325 aaKnown RBP5.36□□□□□ -1.55
SHP1YBL058W GOR1P53839 350 aa5.36□□□□□ -1.55
SHP1YBL058W INN1P53901 409 aa5.36□□□□□ -1.55
SHP1YBL058W UBX4P54730 416 aa5.36□□□□□ -1.55
SHP1YBL058W VPS60Q03390 229 aa5.36□□□□□ -1.55
SHP1YBL058W MIX14Q04341 121 aa5.36□□□□□ -1.55
SHP1YBL058W TDA5Q06417 326 aaKnown RBP5.36□□□□□ -1.55
SHP1YBL058W FLO9P39712 1322 aa5.36□□□□□ -1.55
SHP1YBL058W YFR010W-AP0C5N0 62 aa5.35□□□□□ -1.55
SHP1YBL058W STE12P13574 688 aa5.35□□□□□ -1.55
SHP1YBL058W AAC3P18238 307 aa5.35□□□□□ -1.55
SHP1YBL058W PBN1P25580 416 aa5.35□□□□□ -1.55
SHP1YBL058W ATS1P31386 333 aa5.35□□□□□ -1.55
SHP1YBL058W HSP150P32478 413 aa5.35□□□□□ -1.55
SHP1YBL058W SSO1P32867 290 aa5.35□□□□□ -1.55
SHP1YBL058W HSM3P38348 480 aa5.35□□□□□ -1.55
SHP1YBL058W LIN1P38852 340 aaPredicted RBP5.35□□□□□ -1.55
SHP1YBL058W SOK1P40317 901 aa5.35□□□□□ -1.55
SHP1YBL058W ARC1P46672 376 aaKnown RBP5.35□□□□□ -1.55
SHP1YBL058W NAS6P50086 228 aa5.35□□□□□ -1.55
SHP1YBL058W HOS2P53096 452 aaPredicted RBP5.35□□□□□ -1.55
SHP1YBL058W NOP19P53317 196 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms