RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Arfgap2Q99K28 520 aa18.9■□□□□ 0.62
Ddx28-201ENSMUST00000058579 Golph3Q9CRA5 298 aa18.9■□□□□ 0.62
Ddx28-201ENSMUST00000058579 Mpp3O88910 568 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Tbc1d9bQ5SVR0 1263 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Meis1Q60954 390 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 KaznQ69ZS8 779 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Best3Q6H1V1 669 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Hdac10Q6P3E7 666 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Q6PD19 689 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Baiap3Q80TT2 1134 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Mboat7Q8CHK3 473 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Eif3hQ91WK2 352 aaKnown RBP18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Capn9Q9D805 690 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Zfp408H7BX78 710 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 AurkbO70126 345 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 NppbP40753 121 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Pls1Q3V0K9 630 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Git1Q68FF6 770 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 BC048507Q80ZS7 89 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Gpr180Q8BPS4 441 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ccdc87Q8CDL9 855 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rpap2Q8VC34 614 aa18.89■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Gm28510A0A087WP28 240 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ttll10A4Q9F3 704 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Becn2P0DM65 447 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Nlrp4cQ3TKR3 982 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Lrrc36Q3V0M2 755 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Eme2Q56A04 373 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Zfp446Q8C9M8 523 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Bzw2Q91VK1 419 aaKnown RBP18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rfc4Q99J62 364 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 ArcQ9WV31 396 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Pex11aQ9Z211 246 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Gjc1P28229 396 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Eps15P42567 897 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Jdp2P97875 163 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Zc3h18Q0P678 948 aaKnown RBP18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Dcaf17Q3TUL7 519 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rnpc3Q3UZ01 514 aaKnown RBP18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Clul1Q3ZRW6 464 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Tcp10aQ80W76 438 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Pank4Q80YV4 820 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 GopcQ8BH60 463 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 CbsQ91WT9 561 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Slc40a1Q9JHI9 570 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Stat2Q9WVL2 923 aa18.88■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ap1b1O35643 943 aaKnown RBP18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 ProcP33587 460 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rbm46P86049 533 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Akap4Q60662 849 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Haus1Q8BHX1 278 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 3830417A13RikQ8BQJ2 303 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Q91Z58 1206 aa18.87■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Zfp984A2A7A2 547 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Gap43P06837 227 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Mcm5P49718 733 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Meis2P97367 477 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rsad1Q5SUV1 442 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Specc1Q5SXY1 1067 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Acad11Q80XL6 779 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Znf18Q810A1 556 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Calml4Q91WQ9 153 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ndufab1Q9CR21 156 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Fam173bQ9D1Z3 247 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ascc1Q9D8Z1 356 aaKnown RBP18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Tfr2Q9JKX3 798 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Esr2O08537 530 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Mmp15O54732 657 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Sema3eP70275 775 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Dok7Q18PE0 504 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Klra9Q2TJJ8 266 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Muc3aQ3U5A2 218 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Mybpc2Q5XKE0 1136 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Sin3bQ62141 1098 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Mcf2lQ64096 1149 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Nup58Q8R332 587 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Bhmt2Q91WS4 363 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Aipl1Q924K1 328 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Lrp2bpQ9D4C6 346 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Myl7Q9QVP4 175 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 EmcnQ9R0H2 261 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Zfp646Q6NV66 1788 aa18.86■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Trappc11B2RXC1 1133 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Hmgb2P30681 210 aaKnown RBP18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Usp4P35123 962 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Hspa9P38647 679 aaKnown RBP18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 AdkP55264 361 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Gm5935Q497S0 212 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Lgi2Q8K4Z0 550 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Slc5a5Q99PN0 618 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 PpihQ9D868 188 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 1700016G14RikA0A286YCZ6 238 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Prdm11A2AGX3 565 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Fam71aB7XG49 585 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Kcnu1O54982 1121 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Ap1m1P35585 423 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Rapgef1Q3UHC1 1224 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Pcsk7Q61139 770 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 Epha7Q61772 998 aa18.85■□□□□ 0.61
Ddx28-201ENSMUST00000058579 WdpcpQ8C456 722 aa18.85■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms