RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 UTR4P32626 227 aa-2.34□□□□□ -2.78
snR87snR87 MRP8P35719 219 aa-2.34□□□□□ -2.78
snR87snR87 GZF3P42944 551 aaKnown RBP-2.34□□□□□ -2.78
snR87snR87 IES1P43579 692 aa-2.34□□□□□ -2.78
snR87snR87 CTK3P46963 296 aaPredicted RBP-2.34□□□□□ -2.78
snR87snR87 PYK2P52489 506 aaKnown RBP-2.34□□□□□ -2.78
snR87snR87 ZPR1P53303 486 aaKnown RBP-2.34□□□□□ -2.78
snR87snR87 CAB4P53332 305 aa-2.34□□□□□ -2.78
snR87snR87 TGL2P54857 326 aa-2.34□□□□□ -2.78
snR87snR87 YKR005CQ02203 525 aa-2.34□□□□□ -2.78
snR87snR87 SPR28Q04921 423 aa-2.34□□□□□ -2.78
snR87snR87 MFB1Q04922 465 aa-2.34□□□□□ -2.78
snR87snR87 SNX3Q08826 162 aaKnown RBP-2.34□□□□□ -2.78
snR87snR87 YPL162CQ12042 273 aa-2.34□□□□□ -2.78
snR87snR87 YGK3Q12222 375 aaPredicted RBP-2.34□□□□□ -2.78
snR87snR87 STE2D6VTK4 431 aa-2.35□□□□□ -2.79
snR87snR87 RAD7P06779 565 aa-2.35□□□□□ -2.79
snR87snR87 RSR1P13856 272 aa-2.35□□□□□ -2.79
snR87snR87 MSP1P28737 362 aa-2.35□□□□□ -2.79
snR87snR87 YHR177WP38867 453 aa-2.35□□□□□ -2.79
snR87snR87 BMT5P40493 336 aa-2.35□□□□□ -2.79
snR87snR87 DJP1P40564 432 aa-2.35□□□□□ -2.79
snR87snR87 PTR3P43606 678 aa-2.35□□□□□ -2.79
snR87snR87 PIR5P46999 287 aa-2.35□□□□□ -2.79
snR87snR87 DPB11P47027 764 aaPredicted RBP-2.35□□□□□ -2.79
snR87snR87 COS5P47187 383 aa-2.35□□□□□ -2.79
snR87snR87 PEF1P53238 335 aa-2.35□□□□□ -2.79
snR87snR87 MDR1P53258 950 aa-2.35□□□□□ -2.79
snR87snR87 SNP1Q00916 300 aaPredicted RBP-2.35□□□□□ -2.79
snR87snR87 GRH1Q04410 372 aaKnown RBP-2.35□□□□□ -2.79
snR87snR87 POB3Q04636 552 aaKnown RBP-2.35□□□□□ -2.79
snR87snR87 TIM22Q12328 207 aa-2.35□□□□□ -2.79
snR87snR87 HBN1Q96VH4 193 aa-2.35□□□□□ -2.79
snR87snR87 MSB2P32334 1306 aa-2.36□□□□□ -2.79
snR87snR87 SSB1P11484 613 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 PGS1P25578 521 aa-2.36□□□□□ -2.79
snR87snR87 GEX1P25596 615 aa-2.36□□□□□ -2.79
snR87snR87 YCR100CP25606 316 aa-2.36□□□□□ -2.79
snR87snR87 PCL2P25693 308 aa-2.36□□□□□ -2.79
snR87snR87 CAT2P32796 670 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 STE5P32917 917 aa-2.36□□□□□ -2.79
snR87snR87 MDL1P33310 695 aa-2.36□□□□□ -2.79
snR87snR87 SOF1P33750 489 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 GEX2P36173 615 aa-2.36□□□□□ -2.79
snR87snR87 SIF2P38262 535 aa-2.36□□□□□ -2.79
snR87snR87 SHE3P38272 425 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 SSB2P40150 613 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 HAC1P41546 238 aa-2.36□□□□□ -2.79
snR87snR87 PRM10P42946 383 aa-2.36□□□□□ -2.79
snR87snR87 NAS6P50086 228 aa-2.36□□□□□ -2.79
snR87snR87 KNH1P50112 268 aa-2.36□□□□□ -2.79
snR87snR87 MND1P53102 219 aa-2.36□□□□□ -2.79
snR87snR87 GPI1P53306 609 aa-2.36□□□□□ -2.79
snR87snR87 SED5Q01590 340 aa-2.36□□□□□ -2.79
snR87snR87 SHR3Q02774 210 aa-2.36□□□□□ -2.79
snR87snR87 RSM28Q03430 361 aa-2.36□□□□□ -2.79
snR87snR87 TDA1Q03533 586 aa-2.36□□□□□ -2.79
snR87snR87 ENT5Q03769 411 aaKnown RBP-2.36□□□□□ -2.79
snR87snR87 THI73Q07904 523 aa-2.36□□□□□ -2.79
snR87snR87 IES3Q12345 250 aa-2.36□□□□□ -2.79
snR87snR87 RAS2P01120 322 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 PUT2P07275 575 aa-2.37□□□□□ -2.79
snR87snR87 DPM1P14020 267 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 PRE2P30656 287 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 MTC2P34246 357 aa-2.37□□□□□ -2.79
snR87snR87 TCD2P36101 447 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 RFC3P38629 340 aa-2.37□□□□□ -2.79
snR87snR87 GDH3P39708 457 aa-2.37□□□□□ -2.79
snR87snR87 MOB1P40484 314 aa-2.37□□□□□ -2.79
snR87snR87 YIL029CP40538 142 aa-2.37□□□□□ -2.79
snR87snR87 SMC3P47037 1230 aa-2.37□□□□□ -2.79
snR87snR87 SEH1P53011 349 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 YNL247WP53852 767 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 VPS72Q03388 795 aa-2.37□□□□□ -2.79
snR87snR87 YMR111CQ04461 462 aaPredicted RBP-2.37□□□□□ -2.79
snR87snR87 GTB1Q04924 702 aa-2.37□□□□□ -2.79
snR87snR87 ESF1Q06344 628 aaKnown RBP-2.37□□□□□ -2.79
snR87snR87 PHO92Q06390 306 aa-2.37□□□□□ -2.79
snR87snR87 PEX15Q08215 383 aa-2.37□□□□□ -2.79
snR87snR87 APL4Q12028 832 aa-2.37□□□□□ -2.79
snR87snR87 YHR213W-BQ8TGK1 99 aa-2.37□□□□□ -2.79
snR87snR87 TOP1P04786 769 aa-2.38□□□□□ -2.79
snR87snR87 CDC9P04819 755 aa-2.38□□□□□ -2.79
snR87snR87 PUT1P09368 476 aa-2.38□□□□□ -2.79
snR87snR87 YAR066WP0CX18 203 aa-2.38□□□□□ -2.79
snR87snR87 YHR214WP0CX19 203 aa-2.38□□□□□ -2.79
snR87snR87 STI1P15705 589 aaKnown RBP RIP-Chip data-2.38□□□□□ -2.79not detected
snR87snR87 SLY1P22213 666 aa-2.38□□□□□ -2.79
snR87snR87 CDC15P27636 974 aa-2.38□□□□□ -2.79
snR87snR87 MF(ALPHA)2P32435 120 aa-2.38□□□□□ -2.79
snR87snR87 TOA1P32773 286 aa-2.38□□□□□ -2.79
snR87snR87 STO1P34160 861 aaKnown RBP-2.38□□□□□ -2.79
snR87snR87 ARB1P40024 610 aaKnown RBP-2.38□□□□□ -2.79
snR87snR87 YJL118WP47022 219 aa-2.38□□□□□ -2.79
snR87snR87 CTF18P49956 741 aa-2.38□□□□□ -2.79
snR87snR87 SWA2Q06677 668 aa-2.38□□□□□ -2.79
snR87snR87 YOL029CQ08187 201 aa-2.38□□□□□ -2.79
snR87snR87 NUS1Q12063 375 aa-2.38□□□□□ -2.79
snR87snR87 PKH2Q12236 1081 aaKnown RBP-2.38□□□□□ -2.79
snR87snR87 RVB2Q12464 471 aaKnown RBP-2.38□□□□□ -2.79
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms