RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR80, Length 171 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR80snR80 PPQ1P32945 549 aa0.72□□□□□ -2.29
snR80snR80 TRR2P38816 342 aa0.72□□□□□ -2.29
snR80snR80 YNL208WP40159 199 aaKnown RBP0.72□□□□□ -2.29
snR80snR80 AIM24P47127 394 aa0.72□□□□□ -2.29
snR80snR80 UBX4P54730 416 aa0.72□□□□□ -2.29
snR80snR80 TIR4Q12218 487 aaPredicted RBP0.72□□□□□ -2.29
snR80snR80 YDL007C-AQ2V2Q0 85 aa0.72□□□□□ -2.29
snR80snR80 YOR338WQ99326 363 aa0.72□□□□□ -2.29
snR80snR80 STE7P06784 515 aa0.71□□□□□ -2.3
snR80snR80 PLB3Q08108 686 aa0.71□□□□□ -2.3
snR80snR80 PHA2P32452 334 aa0.7□□□□□ -2.3
snR80snR80 WBP1P33767 430 aaKnown RBP0.7□□□□□ -2.3
snR80snR80 PTH2P34222 208 aa0.7□□□□□ -2.3
snR80snR80 YHR054CP38780 354 aa0.7□□□□□ -2.3
snR80snR80 SAP185P40856 1058 aa0.7□□□□□ -2.3
snR80snR80 COS4P43542 379 aa0.7□□□□□ -2.3
snR80snR80 HMS2P47175 358 aa0.7□□□□□ -2.3
snR80snR80 YIF1P53845 314 aaKnown RBP0.7□□□□□ -2.3
snR80snR80 MDM36Q06820 579 aa0.7□□□□□ -2.3
snR80snR80 LOT6Q07923 191 aa0.7□□□□□ -2.3
snR80snR80 RAX1Q08760 435 aa0.7□□□□□ -2.3
snR80snR80 TFB1P32776 642 aa0.69□□□□□ -2.3
snR80snR80 ECM34P38728 170 aa0.69□□□□□ -2.3
snR80snR80 FHL1P39521 936 aa0.69□□□□□ -2.3
snR80snR80 BIO3P50277 480 aa0.69□□□□□ -2.3
snR80snR80 YGR066CP53242 292 aa0.69□□□□□ -2.3
snR80snR80 VTI1Q04338 217 aa0.69□□□□□ -2.3
snR80snR80 TPT1Q12272 230 aaKnown RBP0.69□□□□□ -2.3
snR80snR80 SEC39Q12745 709 aa0.69□□□□□ -2.3
snR80snR80 YJR112W-AQ3E743 109 aa0.69□□□□□ -2.3
snR80snR80 ASP3-2P0CX77 362 aa0.68□□□□□ -2.3
snR80snR80 ASP3-3P0CX78 362 aa0.68□□□□□ -2.3
snR80snR80 ASP3-4P0CX79 362 aa0.68□□□□□ -2.3
snR80snR80 ASP3-1P0CZ17 362 aa0.68□□□□□ -2.3
snR80snR80 DAL5P15365 543 aa0.68□□□□□ -2.3
snR80snR80 CLN1P20437 546 aa0.68□□□□□ -2.3
snR80snR80 RAD14P28519 371 aa0.68□□□□□ -2.3
snR80snR80 CHS3P29465 1165 aa0.68□□□□□ -2.3
snR80snR80 MRE11P32829 692 aa0.68□□□□□ -2.3
snR80snR80 SDH4P37298 181 aa0.68□□□□□ -2.3
snR80snR80 PFS1P38872 237 aa0.68□□□□□ -2.3
snR80snR80 AIP1P46680 615 aaKnown RBP0.68□□□□□ -2.3
snR80snR80 YGR021WP53212 290 aa0.68□□□□□ -2.3
snR80snR80 NMD4Q12129 218 aa0.68□□□□□ -2.3
snR80snR80 SNF6P18888 332 aa0.67□□□□□ -2.3
snR80snR80 AFG1P32317 509 aa0.67□□□□□ -2.3
snR80snR80 NIP100P33420 868 aa0.67□□□□□ -2.3
snR80snR80 FLC2P39719 783 aa0.67□□□□□ -2.3
snR80snR80 ESL1P40456 1118 aa0.67□□□□□ -2.3
snR80snR80 INP2Q03824 705 aa0.67□□□□□ -2.3
snR80snR80 YBR126W-AQ8TGU7 68 aa0.67□□□□□ -2.3
snR80snR80 GAL80P04387 435 aa0.66□□□□□ -2.3
snR80snR80 CTR86P25355 563 aa0.66□□□□□ -2.3
snR80snR80 MKK1P32490 508 aa0.66□□□□□ -2.3
snR80snR80 FRM2P37261 193 aa0.66□□□□□ -2.3
snR80snR80 YIL059CP40520 121 aa0.66□□□□□ -2.3
snR80snR80 RGM1Q00453 211 aa0.66□□□□□ -2.3
snR80snR80 GTR1Q00582 310 aa0.66□□□□□ -2.3
snR80snR80 GIR2Q03768 265 aaPredicted RBP0.66□□□□□ -2.3
snR80snR80 SYF1Q04048 859 aaPredicted RBP0.66□□□□□ -2.3
snR80snR80 MRX8Q05473 314 aa0.66□□□□□ -2.3
snR80snR80 MFG1Q07684 458 aa0.66□□□□□ -2.3
snR80snR80 EAF3Q12432 401 aa0.66□□□□□ -2.3
snR80snR80 YLR278CQ05854 1341 aa0.65□□□□□ -2.3
snR80snR80 FUS3P16892 353 aaKnown RBP0.65□□□□□ -2.31
snR80snR80 SPO12P17123 173 aa0.65□□□□□ -2.31
snR80snR80 YCL068CP25593 260 aa0.65□□□□□ -2.31
snR80snR80 SIN4P32259 974 aa0.65□□□□□ -2.31
snR80snR80 RRN3P36070 627 aa0.65□□□□□ -2.31
snR80snR80 YHK8P38776 514 aa0.65□□□□□ -2.31
snR80snR80 DPH1P40487 425 aaKnown RBP0.65□□□□□ -2.31
snR80snR80 LCB3P47013 409 aa0.65□□□□□ -2.31
snR80snR80 BAT2P47176 376 aaKnown RBP0.65□□□□□ -2.31
snR80snR80 LDS2Q08218 356 aa0.65□□□□□ -2.31
snR80snR80 DDC1Q08949 612 aa0.65□□□□□ -2.31
snR80snR80 HUA2Q12134 243 aa0.65□□□□□ -2.31
snR80snR80 PIS1P06197 220 aaKnown RBP0.64□□□□□ -2.31
snR80snR80 CKA2P19454 339 aa0.64□□□□□ -2.31
snR80snR80 SPB1P25582 841 aaPredicted RBP0.64□□□□□ -2.31
snR80snR80 ALK2P32789 676 aaPredicted RBP0.64□□□□□ -2.31
snR80snR80 SAS2P40963 338 aa0.64□□□□□ -2.31
snR80snR80 VTC2P43585 828 aa0.64□□□□□ -2.31
snR80snR80 YJR011CP47086 261 aaPredicted RBP0.64□□□□□ -2.31
snR80snR80 YGR149WP48236 432 aa0.64□□□□□ -2.31
snR80snR80 OAZ1Q02803 292 aa0.64□□□□□ -2.31
snR80snR80 TAP42Q04372 366 aa0.64□□□□□ -2.31
snR80snR80 PRM6Q04705 352 aa0.64□□□□□ -2.31
snR80snR80 LDB17Q12342 491 aa0.64□□□□□ -2.31
snR80snR80 YOL085CQ99345 113 aa0.64□□□□□ -2.31
snR80snR80 DFR1P07807 211 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
snR80snR80 IDH2P28241 369 aaKnown RBP0.63□□□□□ -2.31
snR80snR80 SKT5P34226 696 aa0.63□□□□□ -2.31
snR80snR80 SOL2P37262 315 aa0.63□□□□□ -2.31
snR80snR80 YGR250CP53316 781 aaKnown RBP0.63□□□□□ -2.31
snR80snR80 TDA1Q03533 586 aa0.63□□□□□ -2.31
snR80snR80 CCE1Q03702 353 aa0.63□□□□□ -2.31
snR80snR80 SRL2Q12020 392 aa0.63□□□□□ -2.31
snR80snR80 ILV5P06168 395 aaKnown RBP0.62□□□□□ -2.31
snR80snR80 GPH1P06738 902 aaKnown RBP0.62□□□□□ -2.31
snR80snR80 TKL2P33315 681 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms