RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 MRS6P32864 603 aaKnown RBP0.8□□□□□ -2.28
snR55snR55 YHR054CP38780 354 aa0.8□□□□□ -2.28
snR55snR55 YJL144WP47009 104 aa0.8□□□□□ -2.28
snR55snR55 IOC4Q04213 475 aa0.8□□□□□ -2.28
snR55snR55 RPS19AP07280 144 aaKnown RBP0.79□□□□□ -2.28
snR55snR55 RPS19BP07281 144 aaPredicted RBP0.79□□□□□ -2.28
snR55snR55 RAD14P28519 371 aa0.79□□□□□ -2.28
snR55snR55 YHK8P38776 514 aa0.79□□□□□ -2.28
snR55snR55 PFS1P38872 237 aa0.79□□□□□ -2.28
snR55snR55 PCF11P39081 626 aaPredicted RBP0.79□□□□□ -2.28
snR55snR55 STB1P42845 420 aa0.79□□□□□ -2.28
snR55snR55 PHB2P50085 310 aa0.79□□□□□ -2.28
snR55snR55 RPL21AQ02753 160 aaKnown RBP0.79□□□□□ -2.28
snR55snR55 RAX1Q08760 435 aa0.79□□□□□ -2.28
snR55snR55 SRL2Q12020 392 aa0.79□□□□□ -2.28
snR55snR55 RPL21BQ12672 160 aaKnown RBP0.79□□□□□ -2.28
snR55snR55 DFR1P07807 211 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
snR55snR55 RIP1P08067 215 aa0.78□□□□□ -2.28
snR55snR55 DPH5P32469 300 aaPredicted RBP0.78□□□□□ -2.28
snR55snR55 RFC3P38629 340 aa0.78□□□□□ -2.28
snR55snR55 YPT35P38815 214 aaKnown RBP0.78□□□□□ -2.28
snR55snR55 COX14P39103 70 aa0.78□□□□□ -2.28
snR55snR55 LCB3P47013 409 aa0.78□□□□□ -2.28
snR55snR55 MRX6P48564 524 aa0.78□□□□□ -2.28
snR55snR55 HST4P53688 370 aa0.78□□□□□ -2.28
snR55snR55 GPI15P53961 229 aa0.78□□□□□ -2.28
snR55snR55 OAZ1Q02803 292 aa0.78□□□□□ -2.28
snR55snR55 YML131WQ03102 365 aa0.78□□□□□ -2.28
snR55snR55 TDA1Q03533 586 aa0.78□□□□□ -2.28
snR55snR55 MDM36Q06820 579 aa0.78□□□□□ -2.28
snR55snR55 CBS1P14066 229 aa0.77□□□□□ -2.29
snR55snR55 ESL1P40456 1118 aa0.77□□□□□ -2.29
snR55snR55 VHT1P53241 593 aa0.77□□□□□ -2.29
snR55snR55 MEP3P53390 489 aa0.77□□□□□ -2.29
snR55snR55 CEX1Q12453 761 aa0.77□□□□□ -2.29
snR55snR55 YOL085CQ99345 113 aa0.77□□□□□ -2.29
snR55snR55 SEC53P07283 254 aaKnown RBP0.76□□□□□ -2.29
snR55snR55 SCH9P11792 824 aaKnown RBP0.76□□□□□ -2.29
snR55snR55 DEP1P31385 405 aa0.76□□□□□ -2.29
snR55snR55 YEF1P32622 495 aa0.76□□□□□ -2.29
snR55snR55 SKN1P33336 771 aa0.76□□□□□ -2.29
snR55snR55 SEC66P33754 206 aa0.76□□□□□ -2.29
snR55snR55 SRB2P34162 210 aa0.76□□□□□ -2.29
snR55snR55 RRP1P35178 278 aaPredicted RBP0.76□□□□□ -2.29
snR55snR55 MUD2P36084 527 aaKnown RBP0.76□□□□□ -2.29
snR55snR55 DOT5P40553 215 aa0.76□□□□□ -2.29
snR55snR55 MET28P40573 187 aa0.76□□□□□ -2.29
snR55snR55 AIM24P47127 394 aa0.76□□□□□ -2.29
snR55snR55 ZRG17P53735 605 aa0.76□□□□□ -2.29
snR55snR55 MDM30Q05930 598 aa0.76□□□□□ -2.29
snR55snR55 RRP9Q06506 573 aaKnown RBP0.76□□□□□ -2.29
snR55snR55 REX4Q08237 289 aa0.76□□□□□ -2.29
snR55snR55 RIM20Q12033 661 aa0.76□□□□□ -2.29
snR55snR55 RCN2Q12044 265 aa0.76□□□□□ -2.29
snR55snR55 YCL068CP25593 260 aa0.75□□□□□ -2.29
snR55snR55 AST1P35183 429 aa0.75□□□□□ -2.29
snR55snR55 CST26P38226 397 aa0.75□□□□□ -2.29
snR55snR55 YGP1P38616 354 aaKnown RBP0.75□□□□□ -2.29
snR55snR55 YEL057CP39983 233 aa0.75□□□□□ -2.29
snR55snR55 HAC1P41546 238 aa0.75□□□□□ -2.29
snR55snR55 VTC2P43585 828 aa0.75□□□□□ -2.29
snR55snR55 YJR008WP47085 338 aa0.75□□□□□ -2.29
snR55snR55 YJR011CP47086 261 aaPredicted RBP0.75□□□□□ -2.29
snR55snR55 COQ5P49017 307 aa0.75□□□□□ -2.29
snR55snR55 TWF1P53250 332 aa0.75□□□□□ -2.29
snR55snR55 CLD1P53264 445 aa0.75□□□□□ -2.29
snR55snR55 YGR250CP53316 781 aaKnown RBP0.75□□□□□ -2.29
snR55snR55 COS1P53822 381 aa0.75□□□□□ -2.29
snR55snR55 SMC5Q08204 1093 aa0.75□□□□□ -2.29
snR55snR55 TPT1Q12272 230 aaKnown RBP0.75□□□□□ -2.29
snR55snR55 FOB1O13329 566 aa0.74□□□□□ -2.29
snR55snR55 GPH1P06738 902 aaKnown RBP0.74□□□□□ -2.29
snR55snR55 SPS4P09937 338 aa0.74□□□□□ -2.29
snR55snR55 CLN1P20437 546 aa0.74□□□□□ -2.29
snR55snR55 UTR5P32630 166 aa0.74□□□□□ -2.29
snR55snR55 YAL037WP39728 267 aa0.74□□□□□ -2.29
snR55snR55 YIR035CP40579 254 aa0.74□□□□□ -2.29
snR55snR55 YJR030CP47101 745 aa0.74□□□□□ -2.29
snR55snR55 RPT6Q01939 405 aaKnown RBP0.74□□□□□ -2.29
snR55snR55 CCE1Q03702 353 aa0.74□□□□□ -2.29
snR55snR55 YPR096CO13587 100 aa0.73□□□□□ -2.29
snR55snR55 MSP1P28737 362 aa0.73□□□□□ -2.29
snR55snR55 TFB1P32776 642 aa0.73□□□□□ -2.29
snR55snR55 PDC2P32896 925 aa0.73□□□□□ -2.29
snR55snR55 VHC1P38329 1120 aa0.73□□□□□ -2.29
snR55snR55 YNL208WP40159 199 aaKnown RBP0.73□□□□□ -2.29
snR55snR55 EAF3Q12432 401 aa0.73□□□□□ -2.29
snR55snR55 YML133CQ03099 1374 aa0.72□□□□□ -2.29
snR55snR55 YLL067CQ07888 1374 aa0.72□□□□□ -2.29
snR55snR55 YLL066CQ99208 1374 aa0.72□□□□□ -2.29
snR55snR55 MET8P15807 274 aa0.72□□□□□ -2.29
snR55snR55 CMK2P22517 447 aa0.72□□□□□ -2.29
snR55snR55 YPS1P32329 569 aa0.72□□□□□ -2.29
snR55snR55 SDH4P37298 181 aa0.72□□□□□ -2.29
snR55snR55 APE3P37302 537 aaKnown RBP0.72□□□□□ -2.29
snR55snR55 MAM33P40513 266 aa0.72□□□□□ -2.29
snR55snR55 SEH1P53011 349 aaKnown RBP0.72□□□□□ -2.29
snR55snR55 NRM1P53718 249 aa0.72□□□□□ -2.29
snR55snR55 GIP3Q03016 1276 aa0.72□□□□□ -2.29
snR55snR55 ATG16Q03818 150 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms