RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C AFT2Q08957 416 aa4.4□□□□□ -1.71
TRE1YPL176C YDL177CQ12257 170 aa4.4□□□□□ -1.71
TRE1YPL176C TY2B-BQ12491 1770 aa4.4□□□□□ -1.71
TRE1YPL176C RPS24AP0CX31 135 aaKnown RBP4.39□□□□□ -1.71
TRE1YPL176C RPS24BP0CX32 135 aaKnown RBP4.39□□□□□ -1.71
TRE1YPL176C ELO2P25358 347 aa4.39□□□□□ -1.71
TRE1YPL176C SIN4P32259 974 aa4.39□□□□□ -1.71
TRE1YPL176C RIB1P38066 345 aa4.39□□□□□ -1.71
TRE1YPL176C LDB7P38210 180 aa4.39□□□□□ -1.71
TRE1YPL176C BUR6P40096 142 aa4.39□□□□□ -1.71
TRE1YPL176C HXT9P40885 567 aa4.39□□□□□ -1.71
TRE1YPL176C HXT11P54862 567 aa4.39□□□□□ -1.71
TRE1YPL176C SHR3Q02774 210 aa4.39□□□□□ -1.71
TRE1YPL176C CDC123Q05791 360 aa4.39□□□□□ -1.71
TRE1YPL176C DCR2Q05924 578 aa4.39□□□□□ -1.71
TRE1YPL176C MRPL35Q06678 367 aa4.39□□□□□ -1.71
TRE1YPL176C ESA1Q08649 445 aa4.39□□□□□ -1.71
TRE1YPL176C POM34Q12445 299 aa4.39□□□□□ -1.71
TRE1YPL176C ECM3Q99252 613 aa4.39□□□□□ -1.71
TRE1YPL176C PUT2P07275 575 aa4.39□□□□□ -1.71
TRE1YPL176C CHS1P08004 1131 aa4.39□□□□□ -1.71
TRE1YPL176C PMR1P13586 950 aa4.39□□□□□ -1.71
TRE1YPL176C YSP3P25036 478 aa4.39□□□□□ -1.71
TRE1YPL176C APL1P27351 700 aa4.39□□□□□ -1.71
TRE1YPL176C GCG1P32656 232 aaKnown RBP4.39□□□□□ -1.71
TRE1YPL176C DBP7P36120 742 aaKnown RBP4.39□□□□□ -1.71
TRE1YPL176C GPI16P38875 610 aa4.39□□□□□ -1.71
TRE1YPL176C LSM1P47017 172 aaKnown RBP4.39□□□□□ -1.71
TRE1YPL176C UBX6P47049 396 aa4.39□□□□□ -1.71
TRE1YPL176C SNX4P47057 423 aa4.39□□□□□ -1.71
TRE1YPL176C STE24P47154 453 aa4.39□□□□□ -1.71
TRE1YPL176C COX18P53239 316 aa4.39□□□□□ -1.71
TRE1YPL176C THI7Q05998 598 aa4.39□□□□□ -1.71
TRE1YPL176C CDA1Q06702 301 aa4.39□□□□□ -1.71
TRE1YPL176C MSH5Q12175 901 aa4.39□□□□□ -1.71
TRE1YPL176C SPO24Q3E752 67 aa4.39□□□□□ -1.71
TRE1YPL176C TUS1Q06412 1307 aa4.39□□□□□ -1.71
TRE1YPL176C KIN82P25341 720 aa4.38□□□□□ -1.71
TRE1YPL176C PRR1P28708 518 aa4.38□□□□□ -1.71
TRE1YPL176C PRP18P33411 251 aaPredicted RBP4.38□□□□□ -1.71
TRE1YPL176C COS9P36034 407 aa4.38□□□□□ -1.71
TRE1YPL176C RPF2P36160 344 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C ARA1P38115 344 aa4.38□□□□□ -1.71
TRE1YPL176C SPP381P38282 291 aaPredicted RBP4.38□□□□□ -1.71
TRE1YPL176C PFS1P38872 237 aa4.38□□□□□ -1.71
TRE1YPL176C YHR210CP38893 341 aa4.38□□□□□ -1.71
TRE1YPL176C PLB1P39105 664 aa4.38□□□□□ -1.71
TRE1YPL176C SNG1P46950 547 aa4.38□□□□□ -1.71
TRE1YPL176C RRN9P53437 365 aa4.38□□□□□ -1.71
TRE1YPL176C YAT1P80235 687 aa4.38□□□□□ -1.71
TRE1YPL176C SPP2Q02521 185 aa4.38□□□□□ -1.71
TRE1YPL176C NUP116Q02630 1113 aa4.38□□□□□ -1.71
TRE1YPL176C YDC1Q02896 317 aa4.38□□□□□ -1.71
TRE1YPL176C RIM13Q03792 727 aa4.38□□□□□ -1.71
TRE1YPL176C AIM33Q04516 312 aa4.38□□□□□ -1.71
TRE1YPL176C YMR226CQ05016 267 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C ARO10Q06408 635 aa4.38□□□□□ -1.71
TRE1YPL176C MCM21Q06675 368 aa4.38□□□□□ -1.71
TRE1YPL176C YOL075CQ08234 1294 aa4.38□□□□□ -1.71
TRE1YPL176C CYC1P00044 109 aaPredicted RBP4.38□□□□□ -1.71
TRE1YPL176C ERG11P10614 530 aa4.38□□□□□ -1.71
TRE1YPL176C CBF1P17106 351 aa4.38□□□□□ -1.71
TRE1YPL176C ART10P18634 518 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C PUP3P25451 205 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C SPS19P32573 292 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C PUB1P32588 453 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
TRE1YPL176C LHS1P36016 881 aa4.38□□□□□ -1.71
TRE1YPL176C BMT2P38278 337 aa4.38□□□□□ -1.71
TRE1YPL176C IMD2P38697 523 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C YHR122WP38829 231 aa4.38□□□□□ -1.71
TRE1YPL176C SOP4P39543 234 aaPredicted RBP4.38□□□□□ -1.71
TRE1YPL176C SDP1P40479 209 aa4.38□□□□□ -1.71
TRE1YPL176C YIL001WP40560 513 aa4.38□□□□□ -1.71
TRE1YPL176C GAB1P41733 394 aa4.38□□□□□ -1.71
TRE1YPL176C TRM112P53738 135 aaPredicted RBP4.38□□□□□ -1.71
TRE1YPL176C MTQ1P53944 314 aa4.38□□□□□ -1.71
TRE1YPL176C ADE16P54113 591 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C TAF12Q03761 539 aa4.38□□□□□ -1.71
TRE1YPL176C YRA1Q12159 226 aaKnown RBP4.38□□□□□ -1.71
TRE1YPL176C YDR262WQ12331 272 aa4.38□□□□□ -1.71
TRE1YPL176C UBA3Q99344 299 aa4.38□□□□□ -1.71
TRE1YPL176C MMS22Q06164 1454 aa4.37□□□□□ -1.71
TRE1YPL176C AAC1P04710 309 aa4.37□□□□□ -1.71
TRE1YPL176C RPL27AP0C2H6 136 aaKnown RBP4.37□□□□□ -1.71
TRE1YPL176C RPL27BP0C2H7 136 aaKnown RBP4.37□□□□□ -1.71
TRE1YPL176C RPL31BP0C2H9 113 aaKnown RBP4.37□□□□□ -1.71
TRE1YPL176C WHI2P12611 486 aa4.37□□□□□ -1.71
TRE1YPL176C PRE10P21242 288 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
TRE1YPL176C CSE1P33307 960 aa4.37□□□□□ -1.71
TRE1YPL176C FES1P38260 290 aa4.37□□□□□ -1.71
TRE1YPL176C AME1P38313 324 aa4.37□□□□□ -1.71
TRE1YPL176C OSH3P38713 996 aaKnown RBP4.37□□□□□ -1.71
TRE1YPL176C BIG1P38813 335 aa4.37□□□□□ -1.71
TRE1YPL176C FMO1P38866 432 aa4.37□□□□□ -1.71
TRE1YPL176C YHR177WP38867 453 aa4.37□□□□□ -1.71
TRE1YPL176C EDC3P39998 551 aaKnown RBP4.37□□□□□ -1.71
TRE1YPL176C TAX4P47030 604 aa4.37□□□□□ -1.71
TRE1YPL176C APS3P47064 194 aa4.37□□□□□ -1.71
TRE1YPL176C KTR5P53966 522 aaPredicted RBP4.37□□□□□ -1.71
TRE1YPL176C COQ9Q05779 260 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms