RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YKL097CP34245 136 aa1.29□□□□□ -2.2
NIP100YPL174C SPT10P35208 640 aa1.29□□□□□ -2.2
NIP100YPL174C GPD2P41911 440 aaKnown RBP1.29□□□□□ -2.2
NIP100YPL174C BRO1P48582 844 aa1.29□□□□□ -2.2
NIP100YPL174C RIF2Q06208 395 aa1.29□□□□□ -2.2
NIP100YPL174C IMH1Q06704 911 aaKnown RBP1.29□□□□□ -2.2
NIP100YPL174C RTN2Q12443 393 aa1.29□□□□□ -2.2
NIP100YPL174C KRE2P27809 442 aa1.28□□□□□ -2.2
NIP100YPL174C YBR137WP38276 179 aa1.28□□□□□ -2.2
NIP100YPL174C WSC4P38739 605 aa1.28□□□□□ -2.2
NIP100YPL174C NDE1P40215 560 aa1.28□□□□□ -2.2
NIP100YPL174C MRM2P53123 320 aa1.28□□□□□ -2.2
NIP100YPL174C JJJ1P53863 590 aa1.28□□□□□ -2.2
NIP100YPL174C SUB1P54000 292 aaKnown RBP1.28□□□□□ -2.2
NIP100YPL174C SYF1Q04048 859 aaPredicted RBP1.28□□□□□ -2.2
NIP100YPL174C YMR130WQ04223 302 aa1.28□□□□□ -2.2
NIP100YPL174C SFI1Q12369 946 aa1.28□□□□□ -2.2
NIP100YPL174C YCL068CP25593 260 aa1.28□□□□□ -2.2
NIP100YPL174C ITR1P30605 584 aa1.28□□□□□ -2.2
NIP100YPL174C IMP2'P32351 346 aa1.28□□□□□ -2.2
NIP100YPL174C ECM8P38246 354 aa1.28□□□□□ -2.2
NIP100YPL174C NOC2P39744 710 aaKnown RBP1.28□□□□□ -2.2
NIP100YPL174C YER184CP39961 794 aa1.28□□□□□ -2.2
NIP100YPL174C RTN1Q04947 295 aaKnown RBP1.28□□□□□ -2.2
NIP100YPL174C YLR345WQ06137 509 aa1.28□□□□□ -2.2
NIP100YPL174C DCS1Q06151 350 aa1.28□□□□□ -2.2
NIP100YPL174C SKI7Q08491 747 aaPredicted RBP1.28□□□□□ -2.2
NIP100YPL174C MSI1P13712 422 aa1.27□□□□□ -2.21
NIP100YPL174C YME2P32843 850 aa1.27□□□□□ -2.21
NIP100YPL174C APE3P37302 537 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C RRP4P38792 359 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C TAP42Q04372 366 aa1.27□□□□□ -2.21
NIP100YPL174C PRM6Q04705 352 aa1.27□□□□□ -2.21
NIP100YPL174C SNU66Q12420 587 aaPredicted RBP1.27□□□□□ -2.21
NIP100YPL174C TY1B-AO13527 1196 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C ILV5P06168 395 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C RAD57P25301 460 aa1.27□□□□□ -2.21
NIP100YPL174C SMY1P32364 656 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C RPN12P32496 274 aa1.27□□□□□ -2.21
NIP100YPL174C RRP1P35178 278 aaPredicted RBP1.27□□□□□ -2.21
NIP100YPL174C MMF1P40185 145 aaKnown RBP1.27□□□□□ -2.21
NIP100YPL174C SEC9P40357 651 aa1.27□□□□□ -2.21
NIP100YPL174C SIM1P40472 476 aa1.27□□□□□ -2.21
NIP100YPL174C AIM24P47127 394 aa1.27□□□□□ -2.21
NIP100YPL174C COS5P47187 383 aa1.27□□□□□ -2.21
NIP100YPL174C GPI15P53961 229 aa1.27□□□□□ -2.21
NIP100YPL174C SKO1Q02100 647 aa1.27□□□□□ -2.21
NIP100YPL174C MRPS16Q02608 121 aa1.27□□□□□ -2.21
NIP100YPL174C YLR287CQ05881 355 aa1.27□□□□□ -2.21
NIP100YPL174C COS7Q07788 383 aa1.27□□□□□ -2.21
NIP100YPL174C SMC5Q08204 1093 aa1.27□□□□□ -2.21
NIP100YPL174C BUD21Q08492 214 aaPredicted RBP1.27□□□□□ -2.21
NIP100YPL174C VPS54Q12071 889 aa1.27□□□□□ -2.21
NIP100YPL174C ROX1P25042 368 aa1.26□□□□□ -2.21
NIP100YPL174C SIN4P32259 974 aa1.26□□□□□ -2.21
NIP100YPL174C GPI18P38211 433 aa1.26□□□□□ -2.21
NIP100YPL174C SBE22P38814 852 aa1.26□□□□□ -2.21
NIP100YPL174C YER186CP40101 306 aa1.26□□□□□ -2.21
NIP100YPL174C LCB3P47013 409 aa1.26□□□□□ -2.21
NIP100YPL174C PIB2P53191 635 aa1.26□□□□□ -2.21
NIP100YPL174C TRM112P53738 135 aaPredicted RBP1.26□□□□□ -2.21
NIP100YPL174C NCA2Q12374 616 aa1.26□□□□□ -2.21
NIP100YPL174C HMS1Q12398 434 aa1.26□□□□□ -2.21
NIP100YPL174C CEX1Q12453 761 aa1.26□□□□□ -2.21
NIP100YPL174C RRD2Q12461 358 aa1.26□□□□□ -2.21
NIP100YPL174C YDL012CQ12489 107 aa1.26□□□□□ -2.21
NIP100YPL174C NAG1Q8TGN9 163 aa1.26□□□□□ -2.21
NIP100YPL174C AFI1Q99222 893 aa1.26□□□□□ -2.21
NIP100YPL174C PIS1P06197 220 aaKnown RBP1.26□□□□□ -2.21
NIP100YPL174C PDE2P06776 526 aa1.26□□□□□ -2.21
NIP100YPL174C DST1P07273 309 aa1.26□□□□□ -2.21
NIP100YPL174C JLP2P40206 208 aa1.26□□□□□ -2.21
NIP100YPL174C CLD1P53264 445 aa1.26□□□□□ -2.21
NIP100YPL174C STD1Q02794 444 aa1.26□□□□□ -2.21
NIP100YPL174C TAF12Q03761 539 aa1.26□□□□□ -2.21
NIP100YPL174C FDH1Q08911 376 aa1.26□□□□□ -2.21
NIP100YPL174C PLP2Q12017 286 aa1.26□□□□□ -2.21
NIP100YPL174C KAR9P32526 644 aa1.25□□□□□ -2.21
NIP100YPL174C YGL262WP53054 175 aa1.25□□□□□ -2.21
NIP100YPL174C OCA2P53949 197 aa1.25□□□□□ -2.21
NIP100YPL174C KAP120Q02932 1032 aa1.25□□□□□ -2.21
NIP100YPL174C YMR102CQ03177 834 aa1.25□□□□□ -2.21
NIP100YPL174C MMT1Q03218 510 aa1.25□□□□□ -2.21
NIP100YPL174C YPR091CQ06833 770 aa1.25□□□□□ -2.21
NIP100YPL174C LOT6Q07923 191 aa1.25□□□□□ -2.21
NIP100YPL174C RRG1Q12167 365 aaPredicted RBP1.25□□□□□ -2.21
NIP100YPL174C BUG1Q12191 341 aa1.25□□□□□ -2.21
NIP100YPL174C TPT1Q12272 230 aaKnown RBP1.25□□□□□ -2.21
NIP100YPL174C GRX6Q12438 231 aa1.25□□□□□ -2.21
NIP100YPL174C COX4P04037 155 aa1.25□□□□□ -2.21
NIP100YPL174C CDC21P06785 304 aa1.25□□□□□ -2.21
NIP100YPL174C ASP3-2P0CX77 362 aa1.25□□□□□ -2.21
NIP100YPL174C ASP3-3P0CX78 362 aa1.25□□□□□ -2.21
NIP100YPL174C ASP3-4P0CX79 362 aa1.25□□□□□ -2.21
NIP100YPL174C ASP3-1P0CZ17 362 aa1.25□□□□□ -2.21
NIP100YPL174C SLM5P25345 492 aaKnown RBP1.25□□□□□ -2.21
NIP100YPL174C CTR86P25355 563 aa1.25□□□□□ -2.21
NIP100YPL174C PFS1P38872 237 aa1.25□□□□□ -2.21
NIP100YPL174C YER079WP40052 210 aaKnown RBP1.25□□□□□ -2.21
NIP100YPL174C EGT2P42835 1041 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms