RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C KEL1P38853 1164 aaKnown RBP4.08□□□□□ -1.76
VPS21YOR089C SPC97P38863 823 aa4.08□□□□□ -1.76
VPS21YOR089C RTR1P40084 226 aaPredicted RBP4.08□□□□□ -1.76
VPS21YOR089C GAT2P40209 560 aa4.08□□□□□ -1.76
VPS21YOR089C SCD6P45978 349 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76 RIP-Chip
VPS21YOR089C CUE3P53137 624 aaKnown RBP4.08□□□□□ -1.76
VPS21YOR089C AQR1P53943 586 aa4.08□□□□□ -1.76
VPS21YOR089C IRC15Q02733 499 aa4.08□□□□□ -1.76
VPS21YOR089C PNG1Q02890 363 aa4.08□□□□□ -1.76
VPS21YOR089C RIM13Q03792 727 aa4.08□□□□□ -1.76
VPS21YOR089C RRB1Q04225 511 aaKnown RBP4.08□□□□□ -1.76
VPS21YOR089C RRP5Q05022 1729 aaKnown RBP4.08□□□□□ -1.76
VPS21YOR089C YLR281CQ05863 155 aa4.08□□□□□ -1.76
VPS21YOR089C MRPL51Q06090 140 aaPredicted RBP4.08□□□□□ -1.76
VPS21YOR089C SOR2Q07786 357 aa4.08□□□□□ -1.76
VPS21YOR089C NRT1Q08485 598 aa4.08□□□□□ -1.76
VPS21YOR089C YLL056CQ12177 298 aa4.08□□□□□ -1.76
VPS21YOR089C UBX3Q12229 455 aa4.08□□□□□ -1.76
VPS21YOR089C SIR4P11978 1358 aa4.07□□□□□ -1.76
VPS21YOR089C YAR066WP0CX18 203 aa4.07□□□□□ -1.76
VPS21YOR089C YHR214WP0CX19 203 aa4.07□□□□□ -1.76
VPS21YOR089C TAL1P15019 335 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C UBA1P22515 1024 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C RPS2P25443 254 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C CRM1P30822 1084 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C ACH1P32316 526 aa4.07□□□□□ -1.76
VPS21YOR089C SMY1P32364 656 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C ADH5P38113 351 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C RIM2P38127 377 aa4.07□□□□□ -1.76
VPS21YOR089C XBP1P40489 647 aa4.07□□□□□ -1.76
VPS21YOR089C YIR016WP40572 265 aa4.07□□□□□ -1.76
VPS21YOR089C PAC11P40960 533 aa4.07□□□□□ -1.76
VPS21YOR089C PHO86P46956 311 aa4.07□□□□□ -1.76
VPS21YOR089C MDV1P47025 714 aa4.07□□□□□ -1.76
VPS21YOR089C PDR16P53860 351 aaKnown RBP4.07□□□□□ -1.76
VPS21YOR089C TDA7P53882 636 aaPredicted RBP4.07□□□□□ -1.76
VPS21YOR089C BNA5Q05979 453 aa4.07□□□□□ -1.76
VPS21YOR089C SGT1Q08446 395 aa4.07□□□□□ -1.76
VPS21YOR089C AFT2Q08957 416 aa4.07□□□□□ -1.76
VPS21YOR089C PSY3Q12318 242 aa4.07□□□□□ -1.76
VPS21YOR089C RRD2Q12461 358 aa4.07□□□□□ -1.76
VPS21YOR089C CDC21P06785 304 aa4.06□□□□□ -1.76
VPS21YOR089C DAP2P18962 818 aa4.06□□□□□ -1.76
VPS21YOR089C PTP1P25044 335 aa4.06□□□□□ -1.76
VPS21YOR089C RAD57P25301 460 aa4.06□□□□□ -1.76
VPS21YOR089C NIP1P32497 812 aaKnown RBP4.06□□□□□ -1.76
VPS21YOR089C CYS4P32582 507 aaKnown RBP4.06□□□□□ -1.76
VPS21YOR089C STN1P38960 494 aa4.06□□□□□ -1.76
VPS21YOR089C ISC1P40015 477 aaKnown RBP4.06□□□□□ -1.76
VPS21YOR089C TRS85P46944 698 aa4.06□□□□□ -1.76
VPS21YOR089C SSN8P47821 323 aa4.06□□□□□ -1.76
VPS21YOR089C GPI8P49018 411 aa4.06□□□□□ -1.76
VPS21YOR089C PRM1P53835 661 aa4.06□□□□□ -1.76
VPS21YOR089C ESBP6P53918 673 aa4.06□□□□□ -1.76
VPS21YOR089C BET4Q00618 327 aa4.06□□□□□ -1.76
VPS21YOR089C YMR254CQ04838 102 aa4.06□□□□□ -1.76
VPS21YOR089C RTC5Q12108 567 aaKnown RBP4.06□□□□□ -1.76
VPS21YOR089C YDL009CQ12210 107 aa4.06□□□□□ -1.76
VPS21YOR089C URB1P34241 1764 aaKnown RBP4.05□□□□□ -1.76
VPS21YOR089C YER190C-BP0CX94 160 aa4.05□□□□□ -1.76
VPS21YOR089C YEL077W-AP0CX95 160 aa4.05□□□□□ -1.76
VPS21YOR089C YGR296C-BP0CX96 160 aa4.05□□□□□ -1.76
VPS21YOR089C YPL283W-BP0CX97 160 aa4.05□□□□□ -1.76
VPS21YOR089C YPR204C-AP0CX98 160 aa4.05□□□□□ -1.76
VPS21YOR089C RDS1P25611 832 aa4.05□□□□□ -1.76
VPS21YOR089C ERG1P32476 496 aaKnown RBP4.05□□□□□ -1.76
VPS21YOR089C FRE1P32791 686 aa4.05□□□□□ -1.76
VPS21YOR089C PCA1P38360 1216 aa4.05□□□□□ -1.76
VPS21YOR089C MDE1P47095 244 aa4.05□□□□□ -1.76
VPS21YOR089C YIP1P53039 248 aa4.05□□□□□ -1.76
VPS21YOR089C ROG1P53118 685 aa4.05□□□□□ -1.76
VPS21YOR089C PCP1P53259 346 aa4.05□□□□□ -1.76
VPS21YOR089C RPL15BP54780 204 aaPredicted RBP4.05□□□□□ -1.76
VPS21YOR089C SPH1Q06160 661 aa4.05□□□□□ -1.76
VPS21YOR089C IPK1Q06667 281 aa4.05□□□□□ -1.76
VPS21YOR089C SYO1Q07395 620 aa4.05□□□□□ -1.76
VPS21YOR089C MUM3Q08750 479 aa4.05□□□□□ -1.76
VPS21YOR089C ARG4P04076 463 aaPredicted RBP4.04□□□□□ -1.76
VPS21YOR089C ILV5P06168 395 aaKnown RBP4.04□□□□□ -1.76
VPS21YOR089C NRP1P32770 719 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
VPS21YOR089C SRB2P34162 210 aa4.04□□□□□ -1.76
VPS21YOR089C INM1P38710 295 aa4.04□□□□□ -1.76
VPS21YOR089C RRF1P38771 230 aa4.04□□□□□ -1.76
VPS21YOR089C RRP4P38792 359 aaKnown RBP4.04□□□□□ -1.76
VPS21YOR089C MNL1P38888 796 aa4.04□□□□□ -1.76
VPS21YOR089C LYS1P38998 373 aaRIP-Chip data4.04□□□□□ -1.76not detected
VPS21YOR089C PCI8P40512 444 aa4.04□□□□□ -1.76
VPS21YOR089C NAS2P40555 220 aa4.04□□□□□ -1.76
VPS21YOR089C YIR014WP40570 242 aa4.04□□□□□ -1.76
VPS21YOR089C YPS6P40583 537 aa4.04□□□□□ -1.76
VPS21YOR089C HMS2P47175 358 aa4.04□□□□□ -1.76
VPS21YOR089C SHE4P51534 789 aa4.04□□□□□ -1.76
VPS21YOR089C YIP5P53108 310 aa4.04□□□□□ -1.76
VPS21YOR089C YNL143CP53908 130 aa4.04□□□□□ -1.76
VPS21YOR089C MMT1Q03218 510 aa4.04□□□□□ -1.76
VPS21YOR089C PML1Q07930 204 aaPredicted RBP4.04□□□□□ -1.76
VPS21YOR089C SLM3Q12093 417 aa4.04□□□□□ -1.76
VPS21YOR089C ATG34Q12292 412 aa4.04□□□□□ -1.76
VPS21YOR089C FKS3Q04952 1785 aa4.04□□□□□ -1.76
VPS21YOR089C COX3P00420 269 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms