RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W TMS1Q12116 473 aa2.57□□□□□ -2
VPS51YKR020W ERV2Q12284 196 aa2.57□□□□□ -2
VPS51YKR020W MYO1P08964 1928 aa2.57□□□□□ -2
VPS51YKR020W HOM3P10869 527 aa2.56□□□□□ -2
VPS51YKR020W CLN3P13365 580 aa2.56□□□□□ -2
VPS51YKR020W IDH2P28241 369 aaKnown RBP2.56□□□□□ -2
VPS51YKR020W YIM1P28625 365 aa2.56□□□□□ -2
VPS51YKR020W AFG1P32317 509 aa2.56□□□□□ -2
VPS51YKR020W SWD3P38123 315 aa2.56□□□□□ -2
VPS51YKR020W FAA2P39518 744 aa2.56□□□□□ -2
VPS51YKR020W SPO22P40511 975 aa2.56□□□□□ -2
VPS51YKR020W MET28P40573 187 aa2.56□□□□□ -2
VPS51YKR020W OST1P41543 476 aaKnown RBP2.56□□□□□ -2
VPS51YKR020W SDT1P53078 280 aa2.56□□□□□ -2
VPS51YKR020W PCP1P53259 346 aa2.56□□□□□ -2
VPS51YKR020W TOF1P53840 1238 aa2.56□□□□□ -2
VPS51YKR020W IBD2P53892 351 aa2.56□□□□□ -2
VPS51YKR020W ODC1Q03028 310 aa2.56□□□□□ -2
VPS51YKR020W TAF11Q04226 346 aa2.56□□□□□ -2
VPS51YKR020W SOV1Q04748 898 aa2.56□□□□□ -2
VPS51YKR020W YLR287CQ05881 355 aa2.56□□□□□ -2
VPS51YKR020W YLR108CQ12259 485 aa2.56□□□□□ -2
VPS51YKR020W SEC39Q12745 709 aa2.56□□□□□ -2
VPS51YKR020W PGA3Q12746 312 aaKnown RBP2.56□□□□□ -2
VPS51YKR020W RAD61Q99359 647 aa2.56□□□□□ -2
VPS51YKR020W ECM29P38737 1868 aa2.56□□□□□ -2
VPS51YKR020W SPB1P25582 841 aaPredicted RBP2.55□□□□□ -2
VPS51YKR020W ANP1P32629 500 aa2.55□□□□□ -2
VPS51YKR020W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
VPS51YKR020W IRC6P43615 237 aa2.55□□□□□ -2
VPS51YKR020W TWF1P53250 332 aa2.55□□□□□ -2
VPS51YKR020W BTN2P53286 410 aa2.55□□□□□ -2
VPS51YKR020W KTR5P53966 522 aaPredicted RBP2.55□□□□□ -2
VPS51YKR020W PNG1Q02890 363 aa2.55□□□□□ -2
VPS51YKR020W MRP51Q02950 344 aa2.55□□□□□ -2
VPS51YKR020W MRPL35Q06678 367 aa2.55□□□□□ -2
VPS51YKR020W MUM3Q08750 479 aa2.55□□□□□ -2
VPS51YKR020W RRG7Q08774 242 aaPredicted RBP2.55□□□□□ -2
VPS51YKR020W ATG29Q12092 213 aa2.55□□□□□ -2
VPS51YKR020W SCM3Q12334 223 aa2.55□□□□□ -2
VPS51YKR020W ARG3P05150 338 aa2.54□□□□□ -2
VPS51YKR020W MET17P06106 444 aa2.54□□□□□ -2
VPS51YKR020W RED1P14291 827 aa2.54□□□□□ -2
VPS51YKR020W TPM1P17536 199 aaKnown RBP2.54□□□□□ -2
VPS51YKR020W ARO2P28777 376 aaKnown RBP2.54□□□□□ -2
VPS51YKR020W VMA8P32610 256 aaKnown RBP2.54□□□□□ -2
VPS51YKR020W REC114P32841 428 aa2.54□□□□□ -2
VPS51YKR020W PMT1P33775 817 aa2.54□□□□□ -2
VPS51YKR020W MYO3P36006 1272 aa2.54□□□□□ -2
VPS51YKR020W CMC1P36064 111 aa2.54□□□□□ -2
VPS51YKR020W THI2P38141 450 aa2.54□□□□□ -2
VPS51YKR020W GPD2P41911 440 aaKnown RBP2.54□□□□□ -2
VPS51YKR020W LAM5P43560 674 aa2.54□□□□□ -2
VPS51YKR020W TRS85P46944 698 aa2.54□□□□□ -2
VPS51YKR020W YGR149WP48236 432 aa2.54□□□□□ -2
VPS51YKR020W FKS1P38631 1876 aaKnown RBP2.54□□□□□ -2
VPS51YKR020W CKA1P15790 372 aa2.53□□□□□ -2
VPS51YKR020W PET123P17558 318 aa2.53□□□□□ -2
VPS51YKR020W ATP10P18496 279 aa2.53□□□□□ -2
VPS51YKR020W MAK31P23059 88 aa2.53□□□□□ -2
VPS51YKR020W RAD14P28519 371 aa2.53□□□□□ -2
VPS51YKR020W GPI10P30777 616 aa2.53□□□□□ -2
VPS51YKR020W SWI3P32591 825 aa2.53□□□□□ -2
VPS51YKR020W PXA2P34230 853 aa2.53□□□□□ -2
VPS51YKR020W BYE1P36106 594 aa2.53□□□□□ -2
VPS51YKR020W PIM1P36775 1133 aa2.53□□□□□ -2
VPS51YKR020W APE3P37302 537 aaKnown RBP2.53□□□□□ -2
VPS51YKR020W VAB2P40003 282 aa2.53□□□□□ -2
VPS51YKR020W PRM5P40476 318 aa2.53□□□□□ -2
VPS51YKR020W ARF3P40994 183 aaRIP-Chip data2.53□□□□□ -2not detected
VPS51YKR020W HXT14P42833 540 aa2.53□□□□□ -2
VPS51YKR020W TIS11P47977 285 aa2.53□□□□□ -2
VPS51YKR020W YIP1P53039 248 aa2.53□□□□□ -2
VPS51YKR020W DSL1P53847 754 aa2.53□□□□□ -2
VPS51YKR020W NCS2P53923 493 aaPredicted RBP2.53□□□□□ -2
VPS51YKR020W ARP5P53946 755 aa2.53□□□□□ -2
VPS51YKR020W SXM1Q04175 944 aaKnown RBP2.53□□□□□ -2
VPS51YKR020W HRT3Q12347 344 aa2.53□□□□□ -2
VPS51YKR020W TUS1Q06412 1307 aa2.52□□□□□ -2.01
VPS51YKR020W RHO2P06781 192 aa2.52□□□□□ -2.01
VPS51YKR020W RNR2P09938 399 aaKnown RBP2.52□□□□□ -2.01
VPS51YKR020W ISY1P21374 235 aaPredicted RBP2.52□□□□□ -2.01
VPS51YKR020W APE2P32454 952 aaKnown RBP2.52□□□□□ -2.01
VPS51YKR020W STB6P36085 766 aa2.52□□□□□ -2.01
VPS51YKR020W RIB5P38145 238 aa2.52□□□□□ -2.01
VPS51YKR020W MIX23P38162 196 aa2.52□□□□□ -2.01
VPS51YKR020W VID24P38263 362 aa2.52□□□□□ -2.01
VPS51YKR020W RRT2P38332 387 aa2.52□□□□□ -2.01
VPS51YKR020W SRP72P38688 640 aaKnown RBP2.52□□□□□ -2.01
VPS51YKR020W MTC6P38849 526 aa2.52□□□□□ -2.01
VPS51YKR020W VPS45P38932 577 aa2.52□□□□□ -2.01
VPS51YKR020W EPL1P43572 832 aa2.52□□□□□ -2.01
VPS51YKR020W RMD9P53140 646 aaKnown RBP2.52□□□□□ -2.01
VPS51YKR020W YMR155WQ03795 547 aa2.52□□□□□ -2.01
VPS51YKR020W MYO5Q04439 1219 aaKnown RBP2.52□□□□□ -2.01
VPS51YKR020W SUE1Q06524 206 aa2.52□□□□□ -2.01
VPS51YKR020W RRD2Q12461 358 aa2.52□□□□□ -2.01
VPS51YKR020W ADH2P00331 348 aaKnown RBP2.51□□□□□ -2.01
VPS51YKR020W RPL3P14126 387 aaKnown RBP2.51□□□□□ -2.01
VPS51YKR020W VMA2P16140 517 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms