RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YOR012WQ12351 137 aa3.76□□□□□ -1.81
CTK1YKL139W SPO12P17123 173 aa3.75□□□□□ -1.81
CTK1YKL139W LSB5P25369 354 aa3.75□□□□□ -1.81
CTK1YKL139W PSO2P30620 661 aa3.75□□□□□ -1.81
CTK1YKL139W TRS65P32893 560 aa3.75□□□□□ -1.81
CTK1YKL139W YDR089WP38966 869 aa3.75□□□□□ -1.81
CTK1YKL139W IKS1P47042 667 aa3.75□□□□□ -1.81
CTK1YKL139W RTT102P53330 157 aa3.75□□□□□ -1.81
CTK1YKL139W STD1Q02794 444 aa3.75□□□□□ -1.81
CTK1YKL139W MMT1Q03218 510 aa3.75□□□□□ -1.81
CTK1YKL139W ABZ2Q03266 374 aa3.75□□□□□ -1.81
CTK1YKL139W PRP3Q03338 469 aaPredicted RBP3.75□□□□□ -1.81
CTK1YKL139W RSN1Q03516 953 aa3.75□□□□□ -1.81
CTK1YKL139W NUP53Q03790 475 aa3.75□□□□□ -1.81
CTK1YKL139W SGT1Q08446 395 aa3.75□□□□□ -1.81
CTK1YKL139W RMD5Q12508 421 aa3.75□□□□□ -1.81
CTK1YKL139W RPC40P07703 335 aaKnown RBP3.74□□□□□ -1.81
CTK1YKL139W SKN1P33336 771 aa3.74□□□□□ -1.81
CTK1YKL139W ASK1P35734 292 aa3.74□□□□□ -1.81
CTK1YKL139W YBL028CP38202 106 aa3.74□□□□□ -1.81
CTK1YKL139W ARC40P38328 384 aaKnown RBP3.74□□□□□ -1.81
CTK1YKL139W HAT2P39984 401 aa3.74□□□□□ -1.81
CTK1YKL139W AVT4P50944 713 aa3.74□□□□□ -1.81
CTK1YKL139W PMT5P52867 743 aa3.74□□□□□ -1.81
CTK1YKL139W RRP46P53256 223 aaPredicted RBP3.74□□□□□ -1.81
CTK1YKL139W YNR048WP53740 393 aa3.74□□□□□ -1.81
CTK1YKL139W MPS1P54199 764 aa3.74□□□□□ -1.81
CTK1YKL139W BET5Q03630 159 aa3.74□□□□□ -1.81
CTK1YKL139W RRB1Q04225 511 aaKnown RBP3.74□□□□□ -1.81
CTK1YKL139W URC2Q04411 772 aa3.74□□□□□ -1.81
CTK1YKL139W SMA2Q04658 369 aa3.74□□□□□ -1.81
CTK1YKL139W ARG4P04076 463 aaPredicted RBP3.73□□□□□ -1.81
CTK1YKL139W RPL12AP0CX53 165 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W RPL12BP0CX54 165 aa3.73□□□□□ -1.81
CTK1YKL139W PRP16P15938 1071 aaPredicted RBP3.73□□□□□ -1.81
CTK1YKL139W SLM5P25345 492 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W GLC7P32598 312 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W PTR2P32901 601 aa3.73□□□□□ -1.81
CTK1YKL139W YKL097CP34245 136 aa3.73□□□□□ -1.81
CTK1YKL139W YBR056WP38081 501 aa3.73□□□□□ -1.81
CTK1YKL139W DHH1P39517 506 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W SHO1P40073 367 aa3.73□□□□□ -1.81
CTK1YKL139W SCW4P53334 386 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W RRP9Q06506 573 aaKnown RBP3.73□□□□□ -1.81
CTK1YKL139W AAD15Q08361 143 aa3.73□□□□□ -1.81
CTK1YKL139W PEX27Q08580 376 aa3.73□□□□□ -1.81
CTK1YKL139W SRL2Q12020 392 aa3.73□□□□□ -1.81
CTK1YKL139W TEF1P02994 458 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W TIP1P27654 210 aaPredicted RBP3.72□□□□□ -1.81
CTK1YKL139W ITR1P30605 584 aa3.72□□□□□ -1.81
CTK1YKL139W ATO2P32907 282 aa3.72□□□□□ -1.81
CTK1YKL139W MMF1P40185 145 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W DIM1P41819 318 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W RRT5P43607 289 aa3.72□□□□□ -1.81
CTK1YKL139W POP6P53218 158 aa3.72□□□□□ -1.81
CTK1YKL139W TIM18Q08749 192 aa3.72□□□□□ -1.81
CTK1YKL139W SAM1P10659 382 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W SAM2P19358 384 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W NDC1P32500 655 aa3.72□□□□□ -1.81
CTK1YKL139W LIN1P38852 340 aaPredicted RBP3.72□□□□□ -1.81
CTK1YKL139W ERV25P54837 211 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W RPM2Q02773 1202 aa3.72□□□□□ -1.81
CTK1YKL139W MRP51Q02950 344 aa3.72□□□□□ -1.81
CTK1YKL139W PIR3Q03180 325 aa3.72□□□□□ -1.81
CTK1YKL139W FMP42Q04991 504 aa3.72□□□□□ -1.81
CTK1YKL139W SNA4Q07549 140 aa3.72□□□□□ -1.81
CTK1YKL139W YAP7Q08182 245 aa3.72□□□□□ -1.81
CTK1YKL139W GEP3Q08622 556 aa3.72□□□□□ -1.81
CTK1YKL139W MUM3Q08750 479 aa3.72□□□□□ -1.81
CTK1YKL139W PKH2Q12236 1081 aaKnown RBP3.72□□□□□ -1.81
CTK1YKL139W MRS3P10566 314 aa3.71□□□□□ -1.82
CTK1YKL139W THR4P16120 514 aaKnown RBP3.71□□□□□ -1.82
CTK1YKL139W YCR043CP25361 127 aa3.71□□□□□ -1.82
CTK1YKL139W DAL80P26343 269 aa3.71□□□□□ -1.82
CTK1YKL139W MET30P39014 640 aa3.71□□□□□ -1.82
CTK1YKL139W YIL169CP40442 995 aa3.71□□□□□ -1.82
CTK1YKL139W MKT1P40850 830 aaKnown RBP3.71□□□□□ -1.82
CTK1YKL139W LAM5P43560 674 aa3.71□□□□□ -1.82
CTK1YKL139W VPS20Q04272 221 aa3.71□□□□□ -1.82
CTK1YKL139W YLR281CQ05863 155 aa3.71□□□□□ -1.82
CTK1YKL139W MAS1P10507 462 aa3.7□□□□□ -1.82
CTK1YKL139W MTF1P14908 341 aaKnown RBP3.7□□□□□ -1.82
CTK1YKL139W SPT10P35208 640 aa3.7□□□□□ -1.82
CTK1YKL139W YBR139WP38109 508 aa3.7□□□□□ -1.82
CTK1YKL139W MTC4P38335 694 aaKnown RBP3.7□□□□□ -1.82
CTK1YKL139W MST28P39552 234 aa3.7□□□□□ -1.82
CTK1YKL139W YND1P40009 630 aa3.7□□□□□ -1.82
CTK1YKL139W RTT105P40063 208 aa3.7□□□□□ -1.82
CTK1YKL139W ALG8P40351 577 aa3.7□□□□□ -1.82
CTK1YKL139W ATM1P40416 690 aa3.7□□□□□ -1.82
CTK1YKL139W SNL1P40548 159 aa3.7□□□□□ -1.82
CTK1YKL139W STE24P47154 453 aa3.7□□□□□ -1.82
CTK1YKL139W TOS2P50078 622 aa3.7□□□□□ -1.82
CTK1YKL139W YMR310CQ04867 317 aaPredicted RBP3.7□□□□□ -1.82
CTK1YKL139W ASA1Q06822 443 aa3.7□□□□□ -1.82
CTK1YKL139W ARF1P11076 181 aaKnown RBP3.69□□□□□ -1.82
CTK1YKL139W DBP3P20447 523 aaKnown RBP3.69□□□□□ -1.82
CTK1YKL139W ATS1P31386 333 aa3.69□□□□□ -1.82
CTK1YKL139W PPQ1P32945 549 aa3.69□□□□□ -1.82
CTK1YKL139W DOA1P36037 715 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms