RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W SKT5P34226 696 aa5.13□□□□□ -1.59
CBF1YJR060W PIM1P36775 1133 aa5.13□□□□□ -1.59
CBF1YJR060W PHO89P38361 574 aa5.13□□□□□ -1.59
CBF1YJR060W DED81P38707 554 aaKnown RBP5.13□□□□□ -1.59
CBF1YJR060W BAP3P41815 604 aa5.13□□□□□ -1.59
CBF1YJR060W UPF3P48412 387 aaKnown RBP5.13□□□□□ -1.59
CBF1YJR060W TIM44Q01852 431 aa5.13□□□□□ -1.59
CBF1YJR060W YML096WQ04489 525 aa5.13□□□□□ -1.59
CBF1YJR060W BNA5Q05979 453 aa5.13□□□□□ -1.59
CBF1YJR060W CRN1Q06440 651 aa5.13□□□□□ -1.59
CBF1YJR060W VAM6Q07468 1049 aa5.13□□□□□ -1.59
CBF1YJR060W ATG29Q12092 213 aa5.13□□□□□ -1.59
CBF1YJR060W CHS5Q12114 671 aaKnown RBP5.13□□□□□ -1.59
CBF1YJR060W MRH1Q12117 320 aaPredicted RBP5.13□□□□□ -1.59
CBF1YJR060W UBX3Q12229 455 aa5.13□□□□□ -1.59
CBF1YJR060W RRP42Q12277 265 aaPredicted RBP5.13□□□□□ -1.59
CBF1YJR060W COX17Q12287 69 aa5.13□□□□□ -1.59
CBF1YJR060W SUL2Q12325 893 aa5.13□□□□□ -1.59
CBF1YJR060W HSH49Q99181 213 aaPredicted RBP5.13□□□□□ -1.59
CBF1YJR060W HFA1P32874 2273 aa5.13□□□□□ -1.59
CBF1YJR060W CRM1P30822 1084 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W MVD1P32377 396 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W ATP11P32453 318 aa5.12□□□□□ -1.59
CBF1YJR060W ASK1P35734 292 aa5.12□□□□□ -1.59
CBF1YJR060W NTR2P36118 322 aaPredicted RBP5.12□□□□□ -1.59
CBF1YJR060W UTH1P36135 365 aa5.12□□□□□ -1.59
CBF1YJR060W TRM7P38238 310 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W YPT35P38815 214 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W UTP9P38882 575 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W YHB1P39676 399 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W RIC1P40395 1056 aa5.12□□□□□ -1.59
CBF1YJR060W YRB1P41920 201 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W SSU1P41930 458 aa5.12□□□□□ -1.59
CBF1YJR060W GAT1P43574 510 aa5.12□□□□□ -1.59
CBF1YJR060W COS12P53053 380 aa5.12□□□□□ -1.59
CBF1YJR060W EFM5P53200 248 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W RHO3Q00245 231 aaKnown RBP5.12□□□□□ -1.59
CBF1YJR060W RMI1Q02685 241 aa5.12□□□□□ -1.59
CBF1YJR060W TAF12Q03761 539 aa5.12□□□□□ -1.59
CBF1YJR060W CSN9Q03981 162 aa5.12□□□□□ -1.59
CBF1YJR060W RRN11Q04712 507 aa5.12□□□□□ -1.59
CBF1YJR060W RHO2P06781 192 aa5.11□□□□□ -1.59
CBF1YJR060W RED1P14291 827 aa5.11□□□□□ -1.59
CBF1YJR060W VPS33P20795 691 aa5.11□□□□□ -1.59
CBF1YJR060W PPH21P23594 369 aa5.11□□□□□ -1.59
CBF1YJR060W COX13P32799 129 aa5.11□□□□□ -1.59
CBF1YJR060W PTM1P32857 523 aa5.11□□□□□ -1.59
CBF1YJR060W ARA1P38115 344 aa5.11□□□□□ -1.59
CBF1YJR060W RIM2P38127 377 aa5.11□□□□□ -1.59
CBF1YJR060W UBS1P38290 277 aa5.11□□□□□ -1.59
CBF1YJR060W YHR127WP38833 243 aaKnown RBP5.11□□□□□ -1.59
CBF1YJR060W YJL193WP39542 402 aa5.11□□□□□ -1.59
CBF1YJR060W NPT1P39683 429 aaKnown RBP5.11□□□□□ -1.59
CBF1YJR060W LTP1P40347 161 aa5.11□□□□□ -1.59
CBF1YJR060W YPS6P40583 537 aa5.11□□□□□ -1.59
CBF1YJR060W ZIM17P42844 174 aa5.11□□□□□ -1.59
CBF1YJR060W FAR3P46671 204 aa5.11□□□□□ -1.59
CBF1YJR060W YJR149WP47177 404 aa5.11□□□□□ -1.59
CBF1YJR060W UBC11P52492 156 aa5.11□□□□□ -1.59
CBF1YJR060W AIF1P52923 378 aa5.11□□□□□ -1.59
CBF1YJR060W PAN2P53010 1115 aaPredicted RBP5.11□□□□□ -1.59
CBF1YJR060W MPS2P53159 387 aa5.11□□□□□ -1.59
CBF1YJR060W RBG2P53295 368 aaKnown RBP5.11□□□□□ -1.59
CBF1YJR060W LSM3P57743 89 aaKnown RBP5.11□□□□□ -1.59
CBF1YJR060W TRM12Q04235 462 aa5.11□□□□□ -1.59
CBF1YJR060W PFA4Q12006 378 aa5.11□□□□□ -1.59
CBF1YJR060W ATG34Q12292 412 aa5.11□□□□□ -1.59
CBF1YJR060W YLR302CO13544 120 aa5.1□□□□□ -1.59
CBF1YJR060W PET122P10355 254 aa5.1□□□□□ -1.59
CBF1YJR060W PRP28P23394 588 aa5.1□□□□□ -1.59
CBF1YJR060W CMK1P27466 446 aaKnown RBP5.1□□□□□ -1.59
CBF1YJR060W LOS1P33418 1100 aaPredicted RBP5.1□□□□□ -1.59
CBF1YJR060W YBR032WP38223 100 aa5.1□□□□□ -1.59
CBF1YJR060W FMP52P40008 231 aa5.1□□□□□ -1.59
CBF1YJR060W TRS85P46944 698 aa5.1□□□□□ -1.59
CBF1YJR060W IDS2P46958 469 aa5.1□□□□□ -1.59
CBF1YJR060W CIS3P47001 227 aa5.1□□□□□ -1.59
CBF1YJR060W MDM34P53083 459 aa5.1□□□□□ -1.59
CBF1YJR060W YGR015CP53208 328 aa5.1□□□□□ -1.59
CBF1YJR060W YGR250CP53316 781 aaKnown RBP5.1□□□□□ -1.59
CBF1YJR060W BSC5P53755 489 aa5.1□□□□□ -1.59
CBF1YJR060W YNL260CP53846 198 aa5.1□□□□□ -1.59
CBF1YJR060W YPL108WQ02872 168 aaPredicted RBP5.1□□□□□ -1.59
CBF1YJR060W YML119WQ03208 357 aa5.1□□□□□ -1.59
CBF1YJR060W TVP15Q03860 143 aa5.1□□□□□ -1.59
CBF1YJR060W YMR034CQ05131 434 aaPredicted RBP5.1□□□□□ -1.59
CBF1YJR060W RGC1Q06108 1083 aaKnown RBP5.1□□□□□ -1.59
CBF1YJR060W SFH1Q06168 426 aa5.1□□□□□ -1.59
CBF1YJR060W AIM6Q07716 390 aa5.1□□□□□ -1.59
CBF1YJR060W RKM5Q12367 367 aa5.1□□□□□ -1.59
CBF1YJR060W SKM1Q12469 655 aa5.1□□□□□ -1.59
CBF1YJR060W SRN2Q99176 213 aa5.1□□□□□ -1.59
CBF1YJR060W IRA2P19158 3079 aa5.09□□□□□ -1.59
CBF1YJR060W STE3P06783 470 aa5.09□□□□□ -1.59
CBF1YJR060W CDC21P06785 304 aa5.09□□□□□ -1.59
CBF1YJR060W PRP16P15938 1071 aaPredicted RBP5.09□□□□□ -1.59
CBF1YJR060W FUR1P18562 216 aaKnown RBP5.09□□□□□ -1.59
CBF1YJR060W CWP1P28319 239 aa5.09□□□□□ -1.59
CBF1YJR060W PRE2P30656 287 aaKnown RBP5.09□□□□□ -1.59
CBF1YJR060W NTH1P32356 751 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms