RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN10	YHR200W	CWP1	P28319	239 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	SSE2	P32590	693 aa	Known RBP	13.13	□□□□□ -0.31
RPN10	YHR200W	NUF2	P33895	451 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	ZTA1	P38230	334 aa	Known RBP	13.13	□□□□□ -0.31
RPN10	YHR200W	YHR177W	P38867	453 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	MNL1	P38888	796 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	FAR7	P43592	221 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	ARI1	P53111	347 aa	Known RBP	13.13	□□□□□ -0.31
RPN10	YHR200W	MCA1	Q08601	432 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	YKL033W-A	Q86ZR7	236 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	NPR1	P22211	790 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	RPS1B	P23248	255 aa	Known RBP	13.12	□□□□□ -0.31
RPN10	YHR200W	POL4	P25615	582 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	TAH1	P25638	111 aa	Predicted RBP	13.12	□□□□□ -0.31
RPN10	YHR200W	NTH1	P32356	751 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	TEF4	P36008	412 aa	Known RBP	13.12	□□□□□ -0.31
RPN10	YHR200W	MTG2	P38860	518 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	PRP39	P39682	629 aa	Known RBP	13.12	□□□□□ -0.31
RPN10	YHR200W	LAS21	P40367	830 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	YPS6	P40583	537 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	MSC1	Q03104	513 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	LOT6	Q07923	191 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	YLR030W	Q07967	263 aa		13.12	□□□□□ -0.31
RPN10	YHR200W	YTM1	Q12024	460 aa	Predicted RBP	13.12	□□□□□ -0.31
RPN10	YHR200W	HTS1	P07263	546 aa	Known RBP	13.11	□□□□□ -0.31
RPN10	YHR200W	TRM1	P15565	570 aa	Known RBP	13.11	□□□□□ -0.31
RPN10	YHR200W	CMK1	P27466	446 aa	Known RBP	13.11	□□□□□ -0.31
RPN10	YHR200W	SWD1	P39706	426 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	AIM2	P39721	246 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	VRG4	P40107	337 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	YGR201C	P42936	225 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	FHN1	P53279	174 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	SED5	Q01590	340 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	RQC1	Q05468	723 aa	Known RBP	13.11	□□□□□ -0.31
RPN10	YHR200W	RRP45	Q05636	305 aa	Known RBP	13.11	□□□□□ -0.31
RPN10	YHR200W	MMT2	Q08970	484 aa		13.11	□□□□□ -0.31
RPN10	YHR200W	ZWF1	P11412	505 aa	Known RBP	13.1	□□□□□ -0.31
RPN10	YHR200W	HOP1	P20050	605 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	PRP2	P20095	876 aa	Predicted RBP	13.1	□□□□□ -0.31
RPN10	YHR200W	VPS33	P20795	691 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	BCK2	P33306	851 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	YRO2	P38079	344 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	FAU1	P40099	211 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	RPL10	P41805	221 aa	Known RBP	13.1	□□□□□ -0.31
RPN10	YHR200W	RHO4	Q00246	291 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	DIC1	Q06143	298 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	OPT2	Q06593	877 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	BMT6	Q12291	365 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	RKM5	Q12367	367 aa		13.1	□□□□□ -0.31
RPN10	YHR200W	SNF5	P18480	905 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	HCS1	P34243	683 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	YEL020C	P39994	560 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	IBA57	P47158	497 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	YGR012W	P53206	393 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	STP3	Q05937	343 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	ISR1	Q06098	443 aa	Known RBP	13.09	□□□□□ -0.31
RPN10	YHR200W	GIC2	Q06648	383 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	FDH1	Q08911	376 aa		13.09	□□□□□ -0.31
RPN10	YHR200W	MF(ALPHA)1	P01149	165 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	KSS1	P14681	368 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	UBC8	P28263	218 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	CDC12	P32468	407 aa	Known RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	LOT5	P34234	306 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	DLD3	P39976	496 aa	Known RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	RPS12	P48589	143 aa	Known RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	UBC9	P50623	157 aa	Predicted RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	DCP2	P53550	970 aa	Known RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	YPL107W	Q02873	248 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	KRE28	Q04431	385 aa		13.08	□□□□□ -0.32
RPN10	YHR200W	YMR310C	Q04867	317 aa	Predicted RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	DTD1	Q07648	150 aa	Known RBP	13.08	□□□□□ -0.32
RPN10	YHR200W	TIM9	O74700	87 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	CDC4	P07834	779 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	RPL1A	P0CX43	217 aa	Known RBP	13.07	□□□□□ -0.32
RPN10	YHR200W	RPL1B	P0CX44	217 aa	Known RBP	13.07	□□□□□ -0.32
RPN10	YHR200W	RPB5	P20434	215 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	MRPL32	P25348	183 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	RER1	P25560	188 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	VPH2	P32341	215 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	PEP12	P32854	288 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	MRPL6	P32904	214 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	QDR2	P40474	542 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	BNA3	P47039	444 aa	Known RBP	13.07	□□□□□ -0.32
RPN10	YHR200W	RIM13	Q03792	727 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	ATG17	Q06410	417 aa		13.07	□□□□□ -0.32
RPN10	YHR200W	MRPS28	P21771	286 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	YMC1	P32331	307 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	MKK1	P32490	508 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	BIG1	P38813	335 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	YAR028W	P39548	234 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	MPM1	P40364	252 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	EMC2	P47133	292 aa	Known RBP	13.06	□□□□□ -0.32
RPN10	YHR200W	RIM21	P48565	533 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	YNL181W	P53878	407 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	RSC9	Q03124	581 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	SIZ1	Q04195	904 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	SKM1	Q12469	655 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	SEC39	Q12745	709 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	TSC13	Q99190	310 aa		13.06	□□□□□ -0.32
RPN10	YHR200W	RIB3	Q99258	208 aa		13.06	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms