RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	CSM1	P25651	190 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	ATP7	P30902	174 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	YPT10	P38146	199 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	PCF11	P39081	626 aa	Predicted RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	ICP55	P40051	511 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	SNL1	P40548	159 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	SAD1	P43589	448 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	LIF1	P53150	421 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	ERG26	P53199	349 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	SAM50	P53969	484 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	DIA1	P54005	336 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	YMR187C	Q03236	431 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	IZH1	Q03419	316 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	IVY1	Q04934	453 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	RPS10A	Q08745	105 aa	Predicted RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	RUP1	Q12242	671 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	BRR1	Q99177	341 aa	Predicted RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	Q0010	Q9ZZX9	128 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	ATP10	P18496	279 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	SOR1	P35497	357 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	LDB7	P38210	180 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	INM1	P38710	295 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	RRP4	P38792	359 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	SUR2	P38992	349 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	UTP25	P40498	721 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
CCM1	YGR150C	RPS10B	P46784	105 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	AMA1	P50082	593 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	ATG4	P53867	494 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	YMR087W	Q04299	284 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	YMR226C	Q05016	267 aa	Known RBP	3.18	□□□□□ -1.9
CCM1	YGR150C	SOR2	Q07786	357 aa		3.18	□□□□□ -1.9
CCM1	YGR150C	NCE102	Q12207	173 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
CCM1	YGR150C	YPT1	P01123	206 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	ADE5,7	P07244	802 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	RPS16A	P0CX51	143 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	RPS16B	P0CX52	143 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	RPL35A	P0CX84	120 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	RPL35B	P0CX85	120 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	MATALPHA2	P0CY08	210 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	HMLALPHA2	P0CY09	210 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	YAK1	P14680	807 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	YSR3	P23501	404 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	RRT12	P25381	491 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	ADE1	P27616	306 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	PEX3	P28795	441 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	MSK1	P32048	576 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	ACH1	P32316	526 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	PRP21	P32524	280 aa	Predicted RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	REC114	P32841	428 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	RSM22	P36056	628 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	MMS21	P38632	267 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	STP2	P38704	541 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	UBA4	P38820	440 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	PFS1	P38872	237 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	PCL6	P40038	420 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	ERG10	P41338	398 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	BUD17	P53727	317 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	EAF7	P53911	425 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	MRP51	Q02950	344 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	YML053C	Q04978	212 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	CMS1	Q07897	291 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	LCB4	Q12246	624 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	ADH2	P00331	348 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	CDC33	P07260	213 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	PEP4	P07267	405 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	MET3	P08536	511 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	RPL24B	P24000	155 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	DBR1	P24309	405 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	UBC6	P33296	250 aa	Predicted RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	PRS4	P38063	326 aa	Predicted RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	DBP8	P38719	431 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	BIG1	P38813	335 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	ANS1	P38832	159 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	TFG2	P41896	400 aa	Predicted RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	PHO86	P46956	311 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	NUP116	Q02630	1113 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	COQ11	Q05892	277 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	YDL057W	Q07379	328 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	SDO1	Q07953	250 aa	Known RBP	3.17	□□□□□ -1.9
CCM1	YGR150C	AAD15	Q08361	143 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	RNH203	Q12338	110 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	YPR1	Q12458	312 aa		3.17	□□□□□ -1.9
CCM1	YGR150C	CHS1	P08004	1131 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	UTR1	P21373	530 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	FUB1	P25659	250 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	PRP18	P33411	251 aa	Predicted RBP	3.16	□□□□□ -1.9
CCM1	YGR150C	RIB1	P38066	345 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	YPK3	P38070	525 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	DSE1	P40077	573 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	YPS6	P40583	537 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	MIG2	P53035	382 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	APM1	Q00776	475 aa	Predicted RBP	3.16	□□□□□ -1.9
CCM1	YGR150C	RSM23	Q01163	450 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	EMI2	Q04409	500 aa	Known RBP	3.16	□□□□□ -1.9
CCM1	YGR150C	YDR222W	Q04925	415 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	BUR2	Q05949	395 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	GMC2	Q06201	188 aa		3.16	□□□□□ -1.9
CCM1	YGR150C	ABP140	Q08641	628 aa	Known RBP	3.16	□□□□□ -1.9
CCM1	YGR150C	YPR022C	Q12139	1133 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms