RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeast

Gene PRE9, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE9	YGR135W	COP1	P53622	1201 aa	Known RBP	4.17	□□□□□ -1.74
PRE9	YGR135W	YAT1	P80235	687 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	ARG7	Q04728	441 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	DYN3	Q04949	312 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	GLO2	Q05584	274 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	YDL086W	Q07505	273 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	LUC7	Q07508	261 aa	Predicted RBP	4.17	□□□□□ -1.74
PRE9	YGR135W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PRE9	YGR135W	IRC13	Q08630	104 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	RSA1	Q08932	381 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	FMP40	Q08968	688 aa	Predicted RBP	4.17	□□□□□ -1.74
PRE9	YGR135W	APC9	Q12107	265 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	PSY3	Q12318	242 aa		4.17	□□□□□ -1.74
PRE9	YGR135W	COX1	P00401	534 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	TPK2	P06245	380 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	MRP13	P12686	339 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	PDA1	P16387	420 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	STF2	P16965	84 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	PMA2	P19657	947 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	FAR1	P21268	830 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	SPB1	P25582	841 aa	Predicted RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	HSP30	P25619	332 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	MEI4	P29467	408 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	VMA6	P32366	345 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	AEP1	P32493	518 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	CDC5	P32562	705 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	SKG6	P32900	734 aa	Predicted RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	CLG1	P35190	452 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	STV1	P37296	890 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	CBR1	P38626	284 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	SEC31	P38968	1273 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	ECM10	P39987	644 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	FCY21	P40039	528 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	MSS2	P40990	351 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	HXT14	P42833	540 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	CCT7	P42943	550 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	DLD2	P46681	530 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	HSH155	P49955	971 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	RMR1	P53060	241 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	TWF1	P53250	332 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	IPI3	P53877	555 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	YNL058C	P53947	316 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	KAP120	Q02932	1032 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	FIN1	Q03898	291 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	URC2	Q04411	772 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	YDR109C	Q04585	715 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	RQC1	Q05468	723 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	SWA2	Q06677	668 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	LOT6	Q07923	191 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	MLH3	Q12083	715 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	CFT2	Q12102	859 aa	Predicted RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	RPN5	Q12250	445 aa	Known RBP	4.16	□□□□□ -1.74
PRE9	YGR135W	GLE1	Q12315	538 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	LDB17	Q12342	491 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	GIS3	Q12418	502 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	YKL033W-A	Q86ZR7	236 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	RGS2	Q99188	309 aa		4.16	□□□□□ -1.74
PRE9	YGR135W	RPN13	O13563	156 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	ATP6	P00854	259 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	RAP1	P11938	827 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PRE9	YGR135W	CMK2	P22517	447 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YCR016W	P25617	290 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PRE9	YGR135W	URA10	P30402	227 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SEC1	P30619	724 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	PHA2	P32452	334 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SSE2	P32590	693 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	SRB2	P34162	210 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	VPS21	P36017	210 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	TCD2	P36101	447 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	RPF2	P36160	344 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	MNN2	P38069	597 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	ATG12	P38316	186 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	RRF1	P38771	230 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YRB2	P40517	327 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	PKP1	P40530	394 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SNZ3	P43545	298 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YFL040W	P43562	540 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	CAK1	P43568	368 aa	Predicted RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	YFL012W	P43580	148 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	DIA3	P52290	468 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YIP4	P53093	235 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YGL039W	P53183	348 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	YGR151C	P53287	111 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	BUD17	P53727	317 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SNZ2	P53824	298 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	CUS2	P53830	285 aa	Predicted RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	INA17	Q02888	182 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	YMR099C	Q03161	297 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	GAL83	Q04739	417 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SSQ1	Q05931	657 aa	Predicted RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	VTA1	Q06263	330 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	MRI1	Q06489	411 aa	Known RBP	4.15	□□□□□ -1.75
PRE9	YGR135W	DCI1	Q08558	271 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	USV1	Q12132	391 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	RLM1	Q12224	676 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	LAS17	Q12446	633 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	SKS1	Q12505	502 aa		4.15	□□□□□ -1.75
PRE9	YGR135W	HXK2	P04807	486 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms