RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C PGA2P53903 129 aa2.04□□□□□ -2.08
PRE4YFR050C ESBP6P53918 673 aa2.04□□□□□ -2.08
PRE4YFR050C RHO3Q00245 231 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C REG1Q00816 1014 aa2.04□□□□□ -2.08
PRE4YFR050C CTL1Q03220 320 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C MZM1Q03429 123 aaPredicted RBP2.04□□□□□ -2.08
PRE4YFR050C RSM28Q03430 361 aa2.04□□□□□ -2.08
PRE4YFR050C YDR415CQ04033 374 aaPredicted RBP2.04□□□□□ -2.08
PRE4YFR050C FMP42Q04991 504 aa2.04□□□□□ -2.08
PRE4YFR050C ENT4Q07872 247 aa2.04□□□□□ -2.08
PRE4YFR050C YLR012CQ07927 99 aa2.04□□□□□ -2.08
PRE4YFR050C PLB3Q08108 686 aa2.04□□□□□ -2.08
PRE4YFR050C SIL1Q08199 421 aa2.04□□□□□ -2.08
PRE4YFR050C YOL075CQ08234 1294 aa2.04□□□□□ -2.08
PRE4YFR050C GPN2Q08726 347 aaPredicted RBP2.04□□□□□ -2.08
PRE4YFR050C TRM8Q12009 286 aa2.04□□□□□ -2.08
PRE4YFR050C SMC6Q12749 1114 aa2.04□□□□□ -2.08
PRE4YFR050C HXK2P04807 486 aaKnown RBP2.03□□□□□ -2.08
PRE4YFR050C PRB1P09232 635 aa2.03□□□□□ -2.08
PRE4YFR050C MTF2P10849 440 aa2.03□□□□□ -2.08
PRE4YFR050C RPB8P20436 146 aa2.03□□□□□ -2.08
PRE4YFR050C STE50P25344 346 aa2.03□□□□□ -2.08
PRE4YFR050C SRB5P32585 307 aa2.03□□□□□ -2.08
PRE4YFR050C FMP46P36141 133 aaKnown RBP2.03□□□□□ -2.08
PRE4YFR050C PRE6P40303 254 aaKnown RBP2.03□□□□□ -2.08
PRE4YFR050C RIC1P40395 1056 aa2.03□□□□□ -2.08
PRE4YFR050C SWP82P43554 623 aa2.03□□□□□ -2.08
PRE4YFR050C TOM22P49334 152 aa2.03□□□□□ -2.08
PRE4YFR050C ARP10Q04549 284 aa2.03□□□□□ -2.08
PRE4YFR050C CIA1Q05583 330 aa2.03□□□□□ -2.08
PRE4YFR050C YOL029CQ08187 201 aa2.03□□□□□ -2.08
PRE4YFR050C NRT1Q08485 598 aa2.03□□□□□ -2.08
PRE4YFR050C CHO1P08456 276 aa2.02□□□□□ -2.09
PRE4YFR050C YFL068WP0CX99 160 aa2.02□□□□□ -2.09
PRE4YFR050C YLL066W-AP0CY00 160 aa2.02□□□□□ -2.09
PRE4YFR050C YLL067W-AP0CY01 160 aa2.02□□□□□ -2.09
PRE4YFR050C OPI1P21957 404 aa2.02□□□□□ -2.09
PRE4YFR050C GID7P25569 745 aa2.02□□□□□ -2.09
PRE4YFR050C TRS65P32893 560 aa2.02□□□□□ -2.09
PRE4YFR050C RTT107P38850 1070 aa2.02□□□□□ -2.09
PRE4YFR050C SPT8P38915 602 aa2.02□□□□□ -2.09
PRE4YFR050C YMR144WP40214 342 aaKnown RBP2.02□□□□□ -2.09
PRE4YFR050C IAH1P41734 238 aa2.02□□□□□ -2.09
PRE4YFR050C RPS10BP46784 105 aaKnown RBP2.02□□□□□ -2.09
PRE4YFR050C YJR079WP47126 109 aa2.02□□□□□ -2.09
PRE4YFR050C YTP1P53584 459 aa2.02□□□□□ -2.09
PRE4YFR050C IST1P53843 298 aaPredicted RBP2.02□□□□□ -2.09
PRE4YFR050C MRS2Q01926 470 aa2.02□□□□□ -2.09
PRE4YFR050C TAF12Q03761 539 aa2.02□□□□□ -2.09
PRE4YFR050C RRN11Q04712 507 aa2.02□□□□□ -2.09
PRE4YFR050C YMR254CQ04838 102 aa2.02□□□□□ -2.09
PRE4YFR050C CUE5Q08412 411 aaKnown RBP2.02□□□□□ -2.09
PRE4YFR050C RPS10AQ08745 105 aaPredicted RBP2.02□□□□□ -2.09
PRE4YFR050C NUS1Q12063 375 aa2.02□□□□□ -2.09
PRE4YFR050C TIP41Q12199 356 aa2.02□□□□□ -2.09
PRE4YFR050C SFI1Q12369 946 aa2.02□□□□□ -2.09
PRE4YFR050C MGR1P25573 417 aa2.01□□□□□ -2.09
PRE4YFR050C FAA1P30624 700 aaKnown RBP2.01□□□□□ -2.09
PRE4YFR050C SSH4P32343 579 aa2.01□□□□□ -2.09
PRE4YFR050C SLC1P33333 303 aa2.01□□□□□ -2.09
PRE4YFR050C MRPL37P36532 105 aa2.01□□□□□ -2.09
PRE4YFR050C YPK3P38070 525 aa2.01□□□□□ -2.09
PRE4YFR050C PSY4P38193 441 aa2.01□□□□□ -2.09
PRE4YFR050C URA8P38627 578 aaPredicted RBP2.01□□□□□ -2.09
PRE4YFR050C CCT6P39079 546 aa2.01□□□□□ -2.09
PRE4YFR050C GTR1Q00582 310 aa2.01□□□□□ -2.09
PRE4YFR050C VMS1Q04311 632 aaKnown RBP2.01□□□□□ -2.09
PRE4YFR050C YOR376WQ08900 122 aa2.01□□□□□ -2.09
PRE4YFR050C APL5Q08951 932 aaKnown RBP2.01□□□□□ -2.09
PRE4YFR050C APL4Q12028 832 aa2.01□□□□□ -2.09
PRE4YFR050C PEX11Q12462 236 aa2.01□□□□□ -2.09
PRE4YFR050C YOR019WQ99248 730 aa2.01□□□□□ -2.09
PRE4YFR050C VCX1Q99385 411 aa2.01□□□□□ -2.09
PRE4YFR050C YBR085C-AO43137 85 aa2□□□□□ -2.09
PRE4YFR050C HNM1P19807 563 aa2□□□□□ -2.09
PRE4YFR050C PRP2P20095 876 aaPredicted RBP2□□□□□ -2.09
PRE4YFR050C ERG8P24521 451 aa2□□□□□ -2.09
PRE4YFR050C CLB2P24869 491 aa2□□□□□ -2.09
PRE4YFR050C YBR139WP38109 508 aa2□□□□□ -2.09
PRE4YFR050C EFM2P38347 419 aa2□□□□□ -2.09
PRE4YFR050C DPB11P47027 764 aaPredicted RBP2□□□□□ -2.09
PRE4YFR050C EKI1Q03764 534 aa2□□□□□ -2.09
PRE4YFR050C ATG16Q03818 150 aa2□□□□□ -2.09
PRE4YFR050C SPO24Q3E752 67 aa2□□□□□ -2.09
PRE4YFR050C DET1Q99288 334 aaKnown RBP2□□□□□ -2.09
PRE4YFR050C RPC53P25441 422 aa1.99□□□□□ -2.09
PRE4YFR050C RPN2P32565 945 aaKnown RBP1.99□□□□□ -2.09
PRE4YFR050C YSC83P32792 385 aa1.99□□□□□ -2.09
PRE4YFR050C APE4P38821 490 aa1.99□□□□□ -2.09
PRE4YFR050C CCT4P39078 528 aaKnown RBP1.99□□□□□ -2.09
PRE4YFR050C YND1P40009 630 aa1.99□□□□□ -2.09
PRE4YFR050C KAP123P40069 1113 aaKnown RBP1.99□□□□□ -2.09
PRE4YFR050C PAN6P40459 309 aa1.99□□□□□ -2.09
PRE4YFR050C PKP1P40530 394 aa1.99□□□□□ -2.09
PRE4YFR050C RTS2P40962 232 aa1.99□□□□□ -2.09
PRE4YFR050C IME4P41833 600 aa1.99□□□□□ -2.09
PRE4YFR050C SMC3P47037 1230 aa1.99□□□□□ -2.09
PRE4YFR050C CRZ1P53968 678 aa1.99□□□□□ -2.09
PRE4YFR050C CSM3Q04659 317 aa1.99□□□□□ -2.09
PRE4YFR050C PSK2Q08217 1101 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms