RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W ASC1P38011 319 aaKnown RBP3.94□□□□□ -1.78
UBP6YFR010W RIB1P38066 345 aa3.94□□□□□ -1.78
UBP6YFR010W MNN2P38069 597 aa3.94□□□□□ -1.78
UBP6YFR010W LDB7P38210 180 aa3.94□□□□□ -1.78
UBP6YFR010W FIG1P38224 298 aa3.94□□□□□ -1.78
UBP6YFR010W BMT2P38278 337 aa3.94□□□□□ -1.78
UBP6YFR010W AME1P38313 324 aa3.94□□□□□ -1.78
UBP6YFR010W YBR259WP38338 688 aa3.94□□□□□ -1.78
UBP6YFR010W PFS1P38872 237 aa3.94□□□□□ -1.78
UBP6YFR010W PHB1P40961 287 aa3.94□□□□□ -1.78
UBP6YFR010W IPI3P53877 555 aa3.94□□□□□ -1.78
UBP6YFR010W CTF19Q02732 369 aa3.94□□□□□ -1.78
UBP6YFR010W SLU7Q02775 382 aaKnown RBP3.94□□□□□ -1.78
UBP6YFR010W YMR209CQ03648 457 aa3.94□□□□□ -1.78
UBP6YFR010W TAF12Q03761 539 aa3.94□□□□□ -1.78
UBP6YFR010W PEX12Q04370 399 aa3.94□□□□□ -1.78
UBP6YFR010W AIM33Q04516 312 aa3.94□□□□□ -1.78
UBP6YFR010W ORM2Q06144 216 aa3.94□□□□□ -1.78
UBP6YFR010W IPK1Q06667 281 aa3.94□□□□□ -1.78
UBP6YFR010W YFT2Q06676 274 aa3.94□□□□□ -1.78
UBP6YFR010W YML003WP0CF16 290 aa3.93□□□□□ -1.78
UBP6YFR010W RPS24AP0CX31 135 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W RPS24BP0CX32 135 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W MRP13P12686 339 aa3.93□□□□□ -1.78
UBP6YFR010W PRP4P20053 465 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W YSR3P23501 404 aa3.93□□□□□ -1.78
UBP6YFR010W VMA16P23968 213 aa3.93□□□□□ -1.78
UBP6YFR010W KIN82P25341 720 aa3.93□□□□□ -1.78
UBP6YFR010W LRE1P25579 583 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W KRE2P27809 442 aa3.93□□□□□ -1.78
UBP6YFR010W RIM1P32445 135 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W CSE1P33307 960 aa3.93□□□□□ -1.78
UBP6YFR010W SNU114P36048 1008 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W RFT1P38206 574 aaPredicted RBP3.93□□□□□ -1.78
UBP6YFR010W OPY1P38271 328 aa3.93□□□□□ -1.78
UBP6YFR010W OSH3P38713 996 aaKnown RBP3.93□□□□□ -1.78
UBP6YFR010W YHR210CP38893 341 aa3.93□□□□□ -1.78
UBP6YFR010W YJL206CP39529 758 aa3.93□□□□□ -1.78
UBP6YFR010W TFG2P41896 400 aaPredicted RBP3.93□□□□□ -1.78
UBP6YFR010W APS3P47064 194 aa3.93□□□□□ -1.78
UBP6YFR010W RFX1P48743 811 aa3.93□□□□□ -1.78
UBP6YFR010W OCA2P53949 197 aa3.93□□□□□ -1.78
UBP6YFR010W SPP2Q02521 185 aa3.93□□□□□ -1.78
UBP6YFR010W YDC1Q02896 317 aa3.93□□□□□ -1.78
UBP6YFR010W ASM4Q05166 528 aa3.93□□□□□ -1.78
UBP6YFR010W MCM21Q06675 368 aa3.93□□□□□ -1.78
UBP6YFR010W MRPL35Q06678 367 aa3.93□□□□□ -1.78
UBP6YFR010W NSE1Q07913 336 aa3.93□□□□□ -1.78
UBP6YFR010W AIM39Q08223 395 aa3.93□□□□□ -1.78
UBP6YFR010W DIA2Q08496 732 aaPredicted RBP3.93□□□□□ -1.78
UBP6YFR010W DDC1Q08949 612 aa3.93□□□□□ -1.78
UBP6YFR010W BAG7Q12128 409 aa3.93□□□□□ -1.78
UBP6YFR010W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBP6YFR010W VAM3Q12241 283 aa3.93□□□□□ -1.78
UBP6YFR010W YDR262WQ12331 272 aa3.93□□□□□ -1.78
UBP6YFR010W CHS1P08004 1131 aa3.92□□□□□ -1.78
UBP6YFR010W ERG11P10614 530 aa3.92□□□□□ -1.78
UBP6YFR010W ALG1P16661 449 aa3.92□□□□□ -1.78
UBP6YFR010W STE18P18852 110 aa3.92□□□□□ -1.78
UBP6YFR010W HXT2P23585 541 aa3.92□□□□□ -1.78
UBP6YFR010W IMG1P25626 169 aa3.92□□□□□ -1.78
UBP6YFR010W CBT1P36038 271 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W SRP102P36057 244 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W CAF4P36130 643 aa3.92□□□□□ -1.78
UBP6YFR010W FMO1P38866 432 aa3.92□□□□□ -1.78
UBP6YFR010W FET3P38993 636 aa3.92□□□□□ -1.78
UBP6YFR010W ECM1P39715 212 aa3.92□□□□□ -1.78
UBP6YFR010W YER121WP40076 114 aa3.92□□□□□ -1.78
UBP6YFR010W SOK1P40317 901 aa3.92□□□□□ -1.78
UBP6YFR010W YJL163CP46996 555 aa3.92□□□□□ -1.78
UBP6YFR010W STE24P47154 453 aa3.92□□□□□ -1.78
UBP6YFR010W TAF6P53040 516 aa3.92□□□□□ -1.78
UBP6YFR010W COX18P53239 316 aa3.92□□□□□ -1.78
UBP6YFR010W NOP19P53317 196 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W TRM112P53738 135 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W ARG5,6Q01217 863 aa3.92□□□□□ -1.78
UBP6YFR010W SHR3Q02774 210 aa3.92□□□□□ -1.78
UBP6YFR010W IZH1Q03419 316 aa3.92□□□□□ -1.78
UBP6YFR010W EBS1Q03466 884 aaKnown RBP3.92□□□□□ -1.78
UBP6YFR010W YMR310CQ04867 317 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W FAR8Q05040 523 aa3.92□□□□□ -1.78
UBP6YFR010W YPR147CQ06522 304 aaKnown RBP3.92□□□□□ -1.78
UBP6YFR010W YDL144CQ07589 356 aa3.92□□□□□ -1.78
UBP6YFR010W SHS1Q07657 551 aa3.92□□□□□ -1.78
UBP6YFR010W DIS3Q08162 1001 aaKnown RBP3.92□□□□□ -1.78
UBP6YFR010W SWM1Q12379 170 aa3.92□□□□□ -1.78
UBP6YFR010W NOT5Q12514 560 aaPredicted RBP3.92□□□□□ -1.78
UBP6YFR010W UBA3Q99344 299 aa3.92□□□□□ -1.78
UBP6YFR010W TAD3Q9URQ3 322 aa3.92□□□□□ -1.78
UBP6YFR010W THP2O13539 261 aaKnown RBP3.91□□□□□ -1.78
UBP6YFR010W PUT2P07275 575 aa3.91□□□□□ -1.78
UBP6YFR010W MAS1P10507 462 aa3.91□□□□□ -1.78
UBP6YFR010W PMR1P13586 950 aa3.91□□□□□ -1.78
UBP6YFR010W FRS2P15625 503 aaKnown RBP3.91□□□□□ -1.78
UBP6YFR010W ISY1P21374 235 aaPredicted RBP3.91□□□□□ -1.78
UBP6YFR010W RRT12P25381 491 aa3.91□□□□□ -1.78
UBP6YFR010W NAM9P27929 486 aa3.91□□□□□ -1.78
UBP6YFR010W VMA6P32366 345 aaKnown RBP3.91□□□□□ -1.78
UBP6YFR010W COS9P36034 407 aa3.91□□□□□ -1.78
UBP6YFR010W ARA1P38115 344 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms