RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C MSC3Q05812 728 aa2.87□□□□□ -1.95
MSH4YFL003C MCP2Q06567 569 aa2.87□□□□□ -1.95
MSH4YFL003C MTR10Q99189 972 aa2.87□□□□□ -1.95
MSH4YFL003C CAR1P00812 333 aaKnown RBP2.87□□□□□ -1.95
MSH4YFL003C SEC1P30619 724 aaKnown RBP2.87□□□□□ -1.95
MSH4YFL003C MCM4P30665 933 aaKnown RBP2.87□□□□□ -1.95
MSH4YFL003C NDI1P32340 513 aa2.87□□□□□ -1.95
MSH4YFL003C FRE1P32791 686 aa2.87□□□□□ -1.95
MSH4YFL003C LOS1P33418 1100 aaPredicted RBP2.87□□□□□ -1.95
MSH4YFL003C MRPL40P36534 297 aa2.87□□□□□ -1.95
MSH4YFL003C VHC1P38329 1120 aa2.87□□□□□ -1.95
MSH4YFL003C PHO86P46956 311 aa2.87□□□□□ -1.95
MSH4YFL003C SAM50P53969 484 aa2.87□□□□□ -1.95
MSH4YFL003C CUE2P36075 443 aaKnown RBP2.86□□□□□ -1.95
MSH4YFL003C VPS45P38932 577 aa2.86□□□□□ -1.95
MSH4YFL003C STN1P38960 494 aa2.86□□□□□ -1.95
MSH4YFL003C YJR011CP47086 261 aaPredicted RBP2.86□□□□□ -1.95
MSH4YFL003C UTP6Q02354 440 aaKnown RBP2.86□□□□□ -1.95
MSH4YFL003C RPM2Q02773 1202 aa2.86□□□□□ -1.95
MSH4YFL003C VPS20Q04272 221 aa2.86□□□□□ -1.95
MSH4YFL003C HSP31Q04432 237 aa2.86□□□□□ -1.95
MSH4YFL003C SRV2P17555 526 aaKnown RBP2.86□□□□□ -1.95
MSH4YFL003C YCR007CP25354 239 aa2.86□□□□□ -1.95
MSH4YFL003C CTR86P25355 563 aa2.86□□□□□ -1.95
MSH4YFL003C RDS1P25611 832 aa2.86□□□□□ -1.95
MSH4YFL003C RAD24P32641 659 aa2.86□□□□□ -1.95
MSH4YFL003C VPS17P32913 551 aa2.86□□□□□ -1.95
MSH4YFL003C STV1P37296 890 aa2.86□□□□□ -1.95
MSH4YFL003C MMS4P38257 691 aa2.86□□□□□ -1.95
MSH4YFL003C XBP1P40489 647 aa2.86□□□□□ -1.95
MSH4YFL003C YPS6P40583 537 aa2.86□□□□□ -1.95
MSH4YFL003C AIP1P46680 615 aaKnown RBP2.86□□□□□ -1.95
MSH4YFL003C RPA34P47006 233 aaPredicted RBP2.86□□□□□ -1.95
MSH4YFL003C ABZ2Q03266 374 aa2.86□□□□□ -1.95
MSH4YFL003C STH1P32597 1359 aa2.86□□□□□ -1.95
MSH4YFL003C GRR1P24814 1151 aa2.85□□□□□ -1.95
MSH4YFL003C YKL097CP34245 136 aa2.85□□□□□ -1.95
MSH4YFL003C ECM15P35195 104 aa2.85□□□□□ -1.95
MSH4YFL003C MIC60P36112 540 aa2.85□□□□□ -1.95
MSH4YFL003C DHH1P39517 506 aaKnown RBP2.85□□□□□ -1.95
MSH4YFL003C CSM2P40465 213 aa2.85□□□□□ -1.95
MSH4YFL003C RRT5P43607 289 aa2.85□□□□□ -1.95
MSH4YFL003C RMD9P53140 646 aaKnown RBP2.85□□□□□ -1.95
MSH4YFL003C YDR387CQ04162 555 aa2.85□□□□□ -1.95
MSH4YFL003C NUP157P40064 1391 aaKnown RBP2.85□□□□□ -1.95
MSH4YFL003C IME2P32581 645 aa2.85□□□□□ -1.95
MSH4YFL003C RRP1P35178 278 aaPredicted RBP2.85□□□□□ -1.95
MSH4YFL003C YND1P40009 630 aa2.85□□□□□ -1.95
MSH4YFL003C TOS2P50078 622 aa2.85□□□□□ -1.95
MSH4YFL003C SHE10P53075 577 aa2.85□□□□□ -1.95
MSH4YFL003C ERG13P54839 491 aaKnown RBP2.85□□□□□ -1.95
MSH4YFL003C MSS11Q03825 758 aa2.85□□□□□ -1.95
MSH4YFL003C RNH1Q04740 348 aa2.85□□□□□ -1.95
MSH4YFL003C RMD5Q12508 421 aa2.85□□□□□ -1.95
MSH4YFL003C TAD3Q9URQ3 322 aa2.85□□□□□ -1.95
MSH4YFL003C CBP2P03874 630 aaPredicted RBP2.84□□□□□ -1.95
MSH4YFL003C STE3P06783 470 aa2.84□□□□□ -1.95
MSH4YFL003C ALG1P16661 449 aa2.84□□□□□ -1.95
MSH4YFL003C SIP2P34164 415 aaKnown RBP2.84□□□□□ -1.95
MSH4YFL003C YHR177WP38867 453 aa2.84□□□□□ -1.95
MSH4YFL003C DIG1Q03063 452 aaKnown RBP2.84□□□□□ -1.95
MSH4YFL003C RRB1Q04225 511 aaKnown RBP2.84□□□□□ -1.95
MSH4YFL003C SCH9P11792 824 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C PMR1P13586 950 aa2.84□□□□□ -1.96
MSH4YFL003C CDC23P16522 626 aa2.84□□□□□ -1.96
MSH4YFL003C HNM1P19807 563 aa2.84□□□□□ -1.96
MSH4YFL003C RNA14P25298 677 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C RIM1P32445 135 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C MSG5P38590 489 aa2.84□□□□□ -1.96
MSH4YFL003C HAT2P39984 401 aa2.84□□□□□ -1.96
MSH4YFL003C VRG4P40107 337 aa2.84□□□□□ -1.96
MSH4YFL003C IAH1P41734 238 aa2.84□□□□□ -1.96
MSH4YFL003C PSA1P41940 361 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C EGD1Q02642 157 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C YMR034CQ05131 434 aaPredicted RBP2.84□□□□□ -1.96
MSH4YFL003C PKH2Q12236 1081 aaKnown RBP2.84□□□□□ -1.96
MSH4YFL003C PFK27Q12471 397 aaPredicted RBP2.84□□□□□ -1.96
MSH4YFL003C ARP6Q12509 438 aa2.84□□□□□ -1.96
MSH4YFL003C LEU4P06208 619 aaKnown RBP2.83□□□□□ -1.96
MSH4YFL003C PDE2P06776 526 aa2.83□□□□□ -1.96
MSH4YFL003C ERG1P32476 496 aaKnown RBP2.83□□□□□ -1.96
MSH4YFL003C LIN1P38852 340 aaPredicted RBP2.83□□□□□ -1.96
MSH4YFL003C SEC27P41811 889 aaKnown RBP2.83□□□□□ -1.96
MSH4YFL003C YIP5P53108 310 aa2.83□□□□□ -1.96
MSH4YFL003C PRM1P53835 661 aa2.83□□□□□ -1.96
MSH4YFL003C YNL181WP53878 407 aa2.83□□□□□ -1.96
MSH4YFL003C TDA7P53882 636 aaPredicted RBP2.83□□□□□ -1.96
MSH4YFL003C RRN5Q02983 363 aa2.83□□□□□ -1.96
MSH4YFL003C IVY1Q04934 453 aa2.83□□□□□ -1.96
MSH4YFL003C HCR1Q05775 265 aaKnown RBP2.83□□□□□ -1.96
MSH4YFL003C IMA3P0CW40 589 aa2.83□□□□□ -1.96
MSH4YFL003C IMA4P0CW41 589 aa2.83□□□□□ -1.96
MSH4YFL003C GCD2P12754 651 aaPredicted RBP2.83□□□□□ -1.96
MSH4YFL003C YCR043CP25361 127 aa2.83□□□□□ -1.96
MSH4YFL003C SMY1P32364 656 aaKnown RBP2.83□□□□□ -1.96
MSH4YFL003C SSO2P39926 295 aa2.83□□□□□ -1.96
MSH4YFL003C GAT2P40209 560 aa2.83□□□□□ -1.96
MSH4YFL003C POP1P41812 875 aa2.83□□□□□ -1.96
MSH4YFL003C LOC1P43586 204 aaPredicted RBP2.83□□□□□ -1.96
MSH4YFL003C ASN2P49090 572 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms