RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YHR045WP38775 560 aa1.21□□□□□ -2.22
SEC3YER008C UTP9P38882 575 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C ALD5P40047 520 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C CIN1P40987 1014 aa1.21□□□□□ -2.22
SEC3YER008C IMD3P50095 523 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C MND1P53102 219 aa1.21□□□□□ -2.22
SEC3YER008C YGL108CP53139 140 aa1.21□□□□□ -2.22
SEC3YER008C YGR126WP53274 230 aa1.21□□□□□ -2.22
SEC3YER008C RPT4P53549 437 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C YPR022CQ12139 1133 aa1.21□□□□□ -2.22
SEC3YER008C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SEC3YER008C LCB4Q12246 624 aa1.21□□□□□ -2.22
SEC3YER008C RRP12Q12754 1228 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C IRA1P18963 3092 aa1.21□□□□□ -2.22
SEC3YER008C MHP1P43638 1398 aa1.2□□□□□ -2.22
SEC3YER008C TKL1P23254 680 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C SPR1P32603 445 aa1.2□□□□□ -2.22
SEC3YER008C MGM101P32787 269 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C MRP4P32902 394 aa1.2□□□□□ -2.22
SEC3YER008C SEC66P33754 206 aa1.2□□□□□ -2.22
SEC3YER008C HES1P35843 434 aa1.2□□□□□ -2.22
SEC3YER008C END3P39013 349 aa1.2□□□□□ -2.22
SEC3YER008C PAC2P39937 518 aa1.2□□□□□ -2.22
SEC3YER008C NUP84P52891 726 aa1.2□□□□□ -2.22
SEC3YER008C RMD9P53140 646 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C SLI1P53304 468 aa1.2□□□□□ -2.22
SEC3YER008C SLG1P54867 378 aa1.2□□□□□ -2.22
SEC3YER008C MDM36Q06820 579 aa1.2□□□□□ -2.22
SEC3YER008C RBD2Q12270 262 aa1.2□□□□□ -2.22
SEC3YER008C RAD61Q99359 647 aa1.2□□□□□ -2.22
SEC3YER008C SAC3P46674 1301 aa1.2□□□□□ -2.22
SEC3YER008C ILV5P06168 395 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C RPS16AP0CX51 143 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C RPS16BP0CX52 143 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C MRPL25P23369 157 aa1.2□□□□□ -2.22
SEC3YER008C HXT2P23585 541 aa1.2□□□□□ -2.22
SEC3YER008C YPS1P32329 569 aa1.2□□□□□ -2.22
SEC3YER008C KRE6P32486 720 aa1.2□□□□□ -2.22
SEC3YER008C ZUO1P32527 433 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C RPL32P38061 130 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C QDR3P38227 689 aa1.2□□□□□ -2.22
SEC3YER008C OTU2P38747 307 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C LIN1P38852 340 aaPredicted RBP1.2□□□□□ -2.22
SEC3YER008C ALP1P38971 573 aa1.2□□□□□ -2.22
SEC3YER008C FET3P38993 636 aa1.2□□□□□ -2.22
SEC3YER008C MNN9P39107 395 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C SNG1P46950 547 aa1.2□□□□□ -2.22
SEC3YER008C DPB11P47027 764 aaPredicted RBP1.2□□□□□ -2.22
SEC3YER008C APT1P49435 187 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C MRK1P50873 501 aa1.2□□□□□ -2.22
SEC3YER008C LSC1P53598 329 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C YNL050CP53952 270 aa1.2□□□□□ -2.22
SEC3YER008C VPS9P54787 451 aa1.2□□□□□ -2.22
SEC3YER008C CAB5Q03941 241 aa1.2□□□□□ -2.22
SEC3YER008C YMR087WQ04299 284 aa1.2□□□□□ -2.22
SEC3YER008C ARR1Q06596 294 aa1.2□□□□□ -2.22
SEC3YER008C MRPL35Q06678 367 aa1.2□□□□□ -2.22
SEC3YER008C YAP7Q08182 245 aa1.2□□□□□ -2.22
SEC3YER008C OSW1Q08692 278 aa1.2□□□□□ -2.22
SEC3YER008C GLT1Q12680 2145 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C CAR1P00812 333 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C IMA3P0CW40 589 aa1.2□□□□□ -2.22
SEC3YER008C IMA4P0CW41 589 aa1.2□□□□□ -2.22
SEC3YER008C SEC63P14906 663 aa1.2□□□□□ -2.22
SEC3YER008C ATP10P18496 279 aa1.2□□□□□ -2.22
SEC3YER008C MCM4P30665 933 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C DPH5P32469 300 aaPredicted RBP1.2□□□□□ -2.22
SEC3YER008C KES1P35844 434 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C TCM62P38228 572 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C YHR210CP38893 341 aa1.2□□□□□ -2.22
SEC3YER008C VHS2P40463 436 aa1.2□□□□□ -2.22
SEC3YER008C YHC3P47040 408 aa1.2□□□□□ -2.22
SEC3YER008C SHE10P53075 577 aa1.2□□□□□ -2.22
SEC3YER008C PIB2P53191 635 aa1.2□□□□□ -2.22
SEC3YER008C RTT102P53330 157 aa1.2□□□□□ -2.22
SEC3YER008C MPP6P53725 186 aaPredicted RBP1.2□□□□□ -2.22
SEC3YER008C YIF1P53845 314 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C BOP3P53958 396 aa1.2□□□□□ -2.22
SEC3YER008C RPN9Q04062 393 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C URC2Q04411 772 aa1.2□□□□□ -2.22
SEC3YER008C YDL218WQ07629 317 aa1.2□□□□□ -2.22
SEC3YER008C IMA2Q08295 589 aa1.2□□□□□ -2.22
SEC3YER008C AEP3Q12089 606 aa1.2□□□□□ -2.22
SEC3YER008C PAA1Q12447 191 aaKnown RBP1.2□□□□□ -2.22
SEC3YER008C SEC39Q12745 709 aa1.2□□□□□ -2.22
SEC3YER008C PGK1P00560 416 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C PEP4P07267 405 aaKnown RBP1.19□□□□□ -2.22
SEC3YER008C CHS1P08004 1131 aa1.19□□□□□ -2.22
SEC3YER008C GPA1P08539 472 aa1.19□□□□□ -2.22
SEC3YER008C MATALPHA1P0CY06 175 aa1.19□□□□□ -2.22
SEC3YER008C HMLALPHA1P0CY07 175 aa1.19□□□□□ -2.22
SEC3YER008C NIP100P33420 868 aa1.19□□□□□ -2.22
SEC3YER008C ARA1P38115 344 aa1.19□□□□□ -2.22
SEC3YER008C TSC10P38342 320 aa1.19□□□□□ -2.22
SEC3YER008C YIL024CP40543 189 aa1.19□□□□□ -2.22
SEC3YER008C HXT9P40885 567 aa1.19□□□□□ -2.22
SEC3YER008C TOS3P43637 560 aa1.19□□□□□ -2.22
SEC3YER008C MDV1P47025 714 aa1.19□□□□□ -2.22
SEC3YER008C INA17Q02888 182 aa1.19□□□□□ -2.22
SEC3YER008C SMP3Q04174 516 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms