RNA–Protein interactions for RNA: YDR508C

GNP1, Transcript of High-affinity glutamine permease, yeast

Gene GNP1, Length 1,992 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GNP1	YDR508C	RPD3	P32561	433 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	PFS1	P38872	237 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	LNP1	P38878	278 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	FET3	P38993	636 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	YKE4	P40544	346 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	COS5	P47187	383 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	EXG2	P52911	562 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	YIP3	P53633	176 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	STD1	Q02794	444 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	YMR209C	Q03648	457 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	RVB1	Q03940	463 aa	Known RBP	7.7	□□□□□ -1.18
GNP1	YDR508C	FAR8	Q05040	523 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	PAA1	Q12447	191 aa	Known RBP	7.7	□□□□□ -1.18
GNP1	YDR508C	YCL012C	Q8J0M4	134 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	SPE1	P08432	466 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	ALG1	P16661	449 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	PRR1	P28708	518 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	TAT1	P38085	619 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	SKN7	P38889	622 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	ALP1	P38971	573 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	JJJ2	P46997	583 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	NOP19	P53317	196 aa	Predicted RBP	7.7	□□□□□ -1.18
GNP1	YDR508C	TRM112	P53738	135 aa	Predicted RBP	7.7	□□□□□ -1.18
GNP1	YDR508C	MTQ1	P53944	314 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	PLP1	Q04004	230 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	YOR223W	Q12015	292 aa		7.7	□□□□□ -1.18
GNP1	YDR508C	ILV2	P07342	687 aa	Known RBP	7.69	□□□□□ -1.18
GNP1	YDR508C	CDC10	P25342	322 aa	Known RBP	7.69	□□□□□ -1.18
GNP1	YDR508C	FRE1	P32791	686 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	LOS1	P33418	1100 aa	Predicted RBP	7.69	□□□□□ -1.18
GNP1	YDR508C	RPF2	P36160	344 aa	Known RBP	7.69	□□□□□ -1.18
GNP1	YDR508C	SRL3	P36167	246 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	STB5	P38699	743 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	JLP2	P40206	208 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	VHS2	P40463	436 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	TED1	P40533	473 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	HXT9	P40885	567 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	IME4	P41833	600 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	QRI1	P43123	477 aa	Known RBP	7.69	□□□□□ -1.18
GNP1	YDR508C	YJR154W	P47181	346 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	HXT11	P54862	567 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	COS7	Q07788	383 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	RSA1	Q08932	381 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	ATG9	Q12142	997 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	SEY1	Q99287	776 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	RIM15	P43565	1770 aa		7.69	□□□□□ -1.18
GNP1	YDR508C	QCR2	P07257	368 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	CHS1	P08004	1131 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	CTR86	P25355	563 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RPC25	P35718	212 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	DUG2	P38149	878 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	YHR033W	P38690	423 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	MIP6	P38760	659 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	CCT2	P39076	527 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	IRC24	P40580	263 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	CTH1	P47976	325 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RPS7B	P48164	190 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	TAF6	P53040	516 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	PKP2	P53170	491 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	MFM1	Q02783	413 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RCR2	Q03446	210 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	GIS1	Q03833	894 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	YML082W	Q04533	649 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	SFH1	Q06168	426 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	NCR1	Q12200	1170 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RLM1	Q12224	676 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	MAS1	P10507	462 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	MBR1	P23493	339 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RPS7A	P26786	190 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	PRE4	P30657	266 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
GNP1	YDR508C	CBT1	P36038	271 aa	Predicted RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	POA1	P38218	177 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	YBR259W	P38338	688 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	SSH1	P38353	490 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	GIC1	P38785	314 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	PRP39	P39682	629 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	UBP9	P39967	754 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	VFA1	P40080	203 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	HYR1	P40581	163 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	TAH11	P47112	604 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	CLA4	P48562	842 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	MTC3	P53077	123 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	YNR065C	P53751	1116 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	UBP16	Q02863	499 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	RRP45	Q05636	305 aa	Known RBP	7.68	□□□□□ -1.18
GNP1	YDR508C	YDL129W	Q07555	291 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	YPL216W	Q08964	1102 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	GPM2	Q12008	311 aa		7.68	□□□□□ -1.18
GNP1	YDR508C	UTP10	P42945	1769 aa	Known RBP	7.67	□□□□□ -1.18
GNP1	YDR508C	THP2	O13539	261 aa	Known RBP	7.67	□□□□□ -1.18
GNP1	YDR508C	PMR1	P13586	950 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	CBS2	P14905	389 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	STE18	P18852	110 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	PPH22	P23595	377 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	YPS1	P32329	569 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	EMP70	P32802	667 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	TFA2	P36145	328 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	SSN3	P39073	555 aa		7.67	□□□□□ -1.18
GNP1	YDR508C	DLD3	P39976	496 aa	Known RBP	7.67	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms