RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	CHS3	P29465	1165 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	DEP1	P31385	405 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	YEF1	P32622	495 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	COX14	P39103	70 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	LCB3	P47013	409 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	RGM1	Q00453	211 aa		0.46	□□□□□ -2.34
SPG3	YDR504C	RPT6	Q01939	405 aa	Known RBP	0.46	□□□□□ -2.34
SPG3	YDR504C	SPO12	P17123	173 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	SIN4	P32259	974 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	COS4	P43542	379 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	AIM24	P47127	394 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	PHB2	P50085	310 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	VHT1	P53241	593 aa		0.45	□□□□□ -2.34
SPG3	YDR504C	NIP100	P33420	868 aa		0.44	□□□□□ -2.34
SPG3	YDR504C	YNL208W	P40159	199 aa	Known RBP	0.44	□□□□□ -2.34
SPG3	YDR504C	SAP185	P40856	1058 aa		0.44	□□□□□ -2.34
SPG3	YDR504C	TDA1	Q03533	586 aa		0.44	□□□□□ -2.34
SPG3	YDR504C	YOL085C	Q99345	113 aa		0.44	□□□□□ -2.34
SPG3	YDR504C	RHO2	P06781	192 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	SNF6	P18888	332 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	IDH2	P28241	369 aa	Known RBP	0.43	□□□□□ -2.34
SPG3	YDR504C	AFG1	P32317	509 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	YHK8	P38776	514 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	TRR2	P38816	342 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	PCF11	P39081	626 aa	Predicted RBP	0.43	□□□□□ -2.34
SPG3	YDR504C	YIL059C	P40520	121 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	YGR021W	P53212	290 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	CLD1	P53264	445 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	MIX17	Q03667	156 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	RRP9	Q06506	573 aa	Known RBP	0.43	□□□□□ -2.34
SPG3	YDR504C	SKI7	Q08491	747 aa	Predicted RBP	0.43	□□□□□ -2.34
SPG3	YDR504C	AVL9	Q12500	764 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	YBR126W-A	Q8TGU7	68 aa		0.43	□□□□□ -2.34
SPG3	YDR504C	CMK2	P22517	447 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	DPH5	P32469	300 aa	Predicted RBP	0.42	□□□□□ -2.34
SPG3	YDR504C	COX13	P32799	129 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	PDC2	P32896	925 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	SAS2	P40963	338 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	LYS14	P40971	790 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	YJR008W	P47085	338 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	BAT2	P47176	376 aa	Known RBP	0.42	□□□□□ -2.34
SPG3	YDR504C	RMD9	P53140	646 aa	Known RBP	0.42	□□□□□ -2.34
SPG3	YDR504C	OAZ1	Q02803	292 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	TAP42	Q04372	366 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	SMC5	Q08204	1093 aa		0.42	□□□□□ -2.34
SPG3	YDR504C	NOP58	Q12499	511 aa	Known RBP	0.42	□□□□□ -2.34
SPG3	YDR504C	DAL5	P15365	543 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	CTR86	P25355	563 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	TFB1	P32776	642 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	YHR054C	P38780	354 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	PEX22	P39718	180 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	YGR149W	P48236	432 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	MDM36	Q06820	579 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	REX4	Q08237	289 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	RIM20	Q12033	661 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	YOR338W	Q99326	363 aa		0.41	□□□□□ -2.34
SPG3	YDR504C	CLN1	P20437	546 aa		0.4	□□□□□ -2.35
SPG3	YDR504C	SPB1	P25582	841 aa	Predicted RBP	0.4	□□□□□ -2.35
SPG3	YDR504C	YCL068C	P25593	260 aa		0.4	□□□□□ -2.35
SPG3	YDR504C	YGR250C	P53316	781 aa	Known RBP	0.4	□□□□□ -2.35
SPG3	YDR504C	RAX1	Q08760	435 aa		0.4	□□□□□ -2.35
SPG3	YDR504C	YJR112W-A	Q3E743	109 aa		0.4	□□□□□ -2.35
SPG3	YDR504C	ZIP1	P31111	875 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	RRP1	P35178	278 aa	Predicted RBP	0.39	□□□□□ -2.35
SPG3	YDR504C	FRM2	P37261	193 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	SMP1	P38128	452 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	YBL081W	P38180	368 aa	Known RBP	0.39	□□□□□ -2.35
SPG3	YDR504C	ESL1	P40456	1118 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	MAM33	P40513	266 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	DUO1	P53168	247 aa	Known RBP	0.39	□□□□□ -2.35
SPG3	YDR504C	CCE1	Q03702	353 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	INP2	Q03824	705 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	YLR345W	Q06137	509 aa		0.39	□□□□□ -2.35
SPG3	YDR504C	AUS1	Q08409	1394 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	FUS3	P16892	353 aa	Known RBP	0.38	□□□□□ -2.35
SPG3	YDR504C	RAD14	P28519	371 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	MRE11	P32829	692 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	ECM34	P38728	170 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	VHS2	P40463	436 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	BIO3	P50277	480 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	VEL1	P53058	206 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	MRX8	Q05473	314 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	DDC1	Q08949	612 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	SRL2	Q12020	392 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	NMD4	Q12129	218 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	EAF3	Q12432	401 aa		0.38	□□□□□ -2.35
SPG3	YDR504C	RPS23A	P0CX29	145 aa	Known RBP	0.37	□□□□□ -2.35
SPG3	YDR504C	RPS23B	P0CX30	145 aa		0.37	□□□□□ -2.35
SPG3	YDR504C	SEC63	P14906	663 aa		0.37	□□□□□ -2.35
SPG3	YDR504C	ALK2	P32789	676 aa	Predicted RBP	0.37	□□□□□ -2.35
SPG3	YDR504C	RRN3	P36070	627 aa		0.37	□□□□□ -2.35
SPG3	YDR504C	LDS2	Q08218	356 aa		0.37	□□□□□ -2.35
SPG3	YDR504C	FLC2	P39719	783 aa		0.36	□□□□□ -2.35
SPG3	YDR504C	VMA13	P41807	478 aa	Known RBP	0.36	□□□□□ -2.35
SPG3	YDR504C	GPI15	P53961	229 aa		0.36	□□□□□ -2.35
SPG3	YDR504C	ENT5	Q03769	411 aa	Known RBP	0.36	□□□□□ -2.35
SPG3	YDR504C	ASP3-2	P0CX77	362 aa		0.35	□□□□□ -2.35
SPG3	YDR504C	ASP3-3	P0CX78	362 aa		0.35	□□□□□ -2.35
SPG3	YDR504C	ASP3-4	P0CX79	362 aa		0.35	□□□□□ -2.35
SPG3	YDR504C	ASP3-1	P0CZ17	362 aa		0.35	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms