RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT3	YDR392W	HOT13	P36078	116 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	SAW1	P39735	261 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	YIL077C	P40508	320 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	SEC27	P41811	889 aa	Known RBP	4.21	□□□□□ -1.74
SPT3	YDR392W	YFL051C	P43552	160 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	YHC3	P47040	408 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	BIO3	P50277	480 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	MIX14	Q04341	121 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	YLR407W	Q06070	228 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	ORM2	Q06144	216 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	GTT2	Q12390	233 aa		4.21	□□□□□ -1.74
SPT3	YDR392W	COS111	P38308	924 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	SSZ1	P38788	538 aa	Known RBP	4.2	□□□□□ -1.74
SPT3	YDR392W	LNP1	P38878	278 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	FAA2	P39518	744 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	OAF1	P39720	1047 aa	Predicted RBP	4.2	□□□□□ -1.74
SPT3	YDR392W	PSA1	P41940	361 aa	Known RBP	4.2	□□□□□ -1.74
SPT3	YDR392W	ROK1	P45818	564 aa	Predicted RBP	4.2	□□□□□ -1.74
SPT3	YDR392W	SBH2	P52871	88 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	TIM13	P53299	105 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	RIM9	Q04734	239 aa		4.2	□□□□□ -1.74
SPT3	YDR392W	YPK1	P12688	680 aa	Known RBP	4.19	□□□□□ -1.74
SPT3	YDR392W	SLY1	P22213	666 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	MSS1	P32559	526 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT3	YDR392W	PRP39	P39682	629 aa	Known RBP	4.19	□□□□□ -1.74
SPT3	YDR392W	RPE1	P46969	238 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	MNN11	P46985	422 aa	Known RBP	4.19	□□□□□ -1.74
SPT3	YDR392W	NNF1	P47149	201 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	COS5	P47187	383 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	YNR068C	P53754	272 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	BET4	Q00618	327 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	PFA5	Q03289	374 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	GPM3	Q12326	303 aa		4.19	□□□□□ -1.74
SPT3	YDR392W	NOP14	Q99207	810 aa	Known RBP	4.19	□□□□□ -1.74
SPT3	YDR392W	FUM1	P08417	488 aa	Known RBP	4.18	□□□□□ -1.74
SPT3	YDR392W	SEC1	P30619	724 aa	Known RBP	4.18	□□□□□ -1.74
SPT3	YDR392W	YPT7	P32939	208 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	RPC37	P36121	282 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	FIG1	P38224	298 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	GPP1	P41277	250 aa	Known RBP	4.18	□□□□□ -1.74
SPT3	YDR392W	RPS0B	P46654	252 aa	Known RBP	4.18	□□□□□ -1.74
SPT3	YDR392W	NCA3	P46955	337 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	MDV1	P47025	714 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	SAP4	P53036	818 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	YIP4	P53093	235 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	YGL117W	P53133	265 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	CPR8	P53728	308 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	OAZ1	Q02803	292 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	GIR2	Q03768	265 aa	Predicted RBP	4.18	□□□□□ -1.74
SPT3	YDR392W	VTA1	Q06263	330 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	VPS36	Q06696	566 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	UIP4	Q08926	304 aa		4.18	□□□□□ -1.74
SPT3	YDR392W	HXK2	P04807	486 aa	Known RBP	4.17	□□□□□ -1.74
SPT3	YDR392W	YAK1	P14680	807 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	AAD3	P25612	363 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	MIG1	P27705	504 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	SPC110	P32380	944 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	RIC1	P40395	1056 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	IME4	P41833	600 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	TOS3	P43637	560 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	BIT61	P47041	543 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	SNF12	P53628	566 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	ENT5	Q03769	411 aa	Known RBP	4.17	□□□□□ -1.74
SPT3	YDR392W	BLS1	Q06071	122 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	IZH3	Q07959	543 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	VHS3	Q08438	674 aa		4.17	□□□□□ -1.74
SPT3	YDR392W	CBP6	P07253	162 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT3	YDR392W	YSP3	P25036	478 aa		4.16	□□□□□ -1.74
SPT3	YDR392W	TAH1	P25638	111 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT3	YDR392W	CDC5	P32562	705 aa		4.16	□□□□□ -1.74
SPT3	YDR392W	SAC6	P32599	642 aa	Known RBP	4.16	□□□□□ -1.74
SPT3	YDR392W	ATG33	Q06485	197 aa		4.16	□□□□□ -1.74
SPT3	YDR392W	YPR022C	Q12139	1133 aa		4.16	□□□□□ -1.74
SPT3	YDR392W	SEY1	Q99287	776 aa		4.16	□□□□□ -1.74
SPT3	YDR392W	RPS3	P05750	240 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	CAR2	P07991	424 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	FRS1	P15624	595 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	ADE1	P27616	306 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	PRS1	P32895	427 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	STB6	P36085	766 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	IFA38	P38286	347 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	YFL064C	P43540	174 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	SNZ3	P43545	298 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	YJL043W	P47053	257 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	SNZ2	P53824	298 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	VBA4	Q04602	768 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	ROY1	Q04847	553 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	YMR310C	Q04867	317 aa	Predicted RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	MMT2	Q08970	484 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	YPR202W	Q08993	238 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	RTR2	Q12378	196 aa		4.15	□□□□□ -1.75
SPT3	YDR392W	EFG1	Q3E705	233 aa	Known RBP	4.15	□□□□□ -1.75
SPT3	YDR392W	CLN1	P20437	546 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	STP22	P25604	385 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	GYP6	P32806	458 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	ELF1	P36053	145 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	PCH2	P38126	564 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	YBP1	P38315	674 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	YIL029C	P40538	142 aa		4.14	□□□□□ -1.75
SPT3	YDR392W	MEP2	P41948	499 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms