RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MRPS9P38120 278 aa2.33□□□□□ -2.04
SNU56YDR240C COX14P39103 70 aa2.33□□□□□ -2.04
SNU56YDR240C NUP116Q02630 1113 aa2.33□□□□□ -2.04
SNU56YDR240C OAZ1Q02803 292 aa2.33□□□□□ -2.04
SNU56YDR240C GIP3Q03016 1276 aa2.33□□□□□ -2.04
SNU56YDR240C RIF2Q06208 395 aa2.33□□□□□ -2.04
SNU56YDR240C SOR2Q07786 357 aa2.33□□□□□ -2.04
SNU56YDR240C BUG1Q12191 341 aa2.33□□□□□ -2.04
SNU56YDR240C PSK1P31374 1356 aa2.32□□□□□ -2.04
SNU56YDR240C SBE22P38814 852 aa2.32□□□□□ -2.04
SNU56YDR240C SEO1P39709 593 aa2.32□□□□□ -2.04
SNU56YDR240C YFR057WP43625 151 aa2.32□□□□□ -2.04
SNU56YDR240C PHO86P46956 311 aa2.32□□□□□ -2.04
SNU56YDR240C ECM11Q04110 302 aa2.32□□□□□ -2.04
SNU56YDR240C YPQ1Q12010 308 aa2.32□□□□□ -2.04
SNU56YDR240C YGK3Q12222 375 aaPredicted RBP2.32□□□□□ -2.04
SNU56YDR240C ATG34Q12292 412 aa2.32□□□□□ -2.04
SNU56YDR240C RTN2Q12443 393 aa2.32□□□□□ -2.04
SNU56YDR240C PRB1P09232 635 aa2.31□□□□□ -2.04
SNU56YDR240C YCL068CP25593 260 aa2.31□□□□□ -2.04
SNU56YDR240C CHK1P38147 527 aa2.31□□□□□ -2.04
SNU56YDR240C YGL138CP53122 345 aa2.31□□□□□ -2.04
SNU56YDR240C MRPL19P53875 158 aa2.31□□□□□ -2.04
SNU56YDR240C SKO1Q02100 647 aa2.31□□□□□ -2.04
SNU56YDR240C SMF3Q12078 473 aaPredicted RBP2.31□□□□□ -2.04
SNU56YDR240C AHC1Q12433 566 aa2.31□□□□□ -2.04
SNU56YDR240C SRV2P17555 526 aaKnown RBP2.3□□□□□ -2.04
SNU56YDR240C PHA2P32452 334 aa2.3□□□□□ -2.04
SNU56YDR240C NIP1P32497 812 aaKnown RBP2.3□□□□□ -2.04
SNU56YDR240C YME2P32843 850 aa2.3□□□□□ -2.04
SNU56YDR240C RRP4P38792 359 aaKnown RBP2.3□□□□□ -2.04
SNU56YDR240C BIR1P47134 954 aa2.3□□□□□ -2.04
SNU56YDR240C PHB2P50085 310 aa2.3□□□□□ -2.04
SNU56YDR240C MKC7P53379 596 aa2.3□□□□□ -2.04
SNU56YDR240C URH1Q04179 340 aa2.3□□□□□ -2.04
SNU56YDR240C AIM32Q04689 311 aa2.3□□□□□ -2.04
SNU56YDR240C RTN1Q04947 295 aaKnown RBP2.3□□□□□ -2.04
SNU56YDR240C MDM36Q06820 579 aa2.3□□□□□ -2.04
SNU56YDR240C ERG3P32353 365 aa2.29□□□□□ -2.04
SNU56YDR240C RRN10P38204 145 aa2.29□□□□□ -2.04
SNU56YDR240C MRM2P53123 320 aa2.29□□□□□ -2.04
SNU56YDR240C MST27P53176 234 aa2.29□□□□□ -2.04
SNU56YDR240C LIP2Q06005 328 aa2.29□□□□□ -2.04
SNU56YDR240C COG4Q06096 861 aa2.29□□□□□ -2.04
SNU56YDR240C DNL4Q08387 944 aaPredicted RBP2.29□□□□□ -2.04
SNU56YDR240C IES4Q08561 116 aa2.29□□□□□ -2.04
SNU56YDR240C CEX1Q12453 761 aa2.29□□□□□ -2.04
SNU56YDR240C COX4P04037 155 aa2.28□□□□□ -2.04
SNU56YDR240C RED1P14291 827 aa2.28□□□□□ -2.04
SNU56YDR240C SAS3P34218 831 aa2.28□□□□□ -2.04
SNU56YDR240C YBR056WP38081 501 aa2.28□□□□□ -2.04
SNU56YDR240C OM14P38325 134 aa2.28□□□□□ -2.04
SNU56YDR240C OXA1P39952 402 aa2.28□□□□□ -2.04
SNU56YDR240C ALF1P53904 254 aa2.28□□□□□ -2.04
SNU56YDR240C TAF11Q04226 346 aa2.28□□□□□ -2.04
SNU56YDR240C RRP9Q06506 573 aaKnown RBP2.28□□□□□ -2.04
SNU56YDR240C TSR2Q06672 205 aaKnown RBP2.28□□□□□ -2.04
SNU56YDR240C SMC5Q08204 1093 aa2.28□□□□□ -2.04
SNU56YDR240C YOL159C-AQ3E769 90 aa2.28□□□□□ -2.04
SNU56YDR240C CBP6P07253 162 aaPredicted RBP2.27□□□□□ -2.05
SNU56YDR240C HOM3P10869 527 aa2.27□□□□□ -2.05
SNU56YDR240C CYS4P32582 507 aaKnown RBP2.27□□□□□ -2.05
SNU56YDR240C IES6P32617 166 aa2.27□□□□□ -2.05
SNU56YDR240C YKL097CP34245 136 aa2.27□□□□□ -2.05
SNU56YDR240C MMS4P38257 691 aa2.27□□□□□ -2.05
SNU56YDR240C BAT1P38891 393 aaKnown RBP2.27□□□□□ -2.05
SNU56YDR240C NOC2P39744 710 aaKnown RBP2.27□□□□□ -2.05
SNU56YDR240C YER186CP40101 306 aa2.27□□□□□ -2.05
SNU56YDR240C MAM33P40513 266 aa2.27□□□□□ -2.05
SNU56YDR240C CCE1Q03702 353 aa2.27□□□□□ -2.05
SNU56YDR240C YET2Q04210 160 aa2.27□□□□□ -2.05
SNU56YDR240C DON1Q05610 365 aa2.27□□□□□ -2.05
SNU56YDR240C LOT6Q07923 191 aa2.27□□□□□ -2.05
SNU56YDR240C MED2Q12124 431 aa2.27□□□□□ -2.05
SNU56YDR240C SFI1Q12369 946 aa2.27□□□□□ -2.05
SNU56YDR240C REC107P21651 314 aa2.26□□□□□ -2.05
SNU56YDR240C ATP3P38077 311 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C TIM17P39515 158 aa2.26□□□□□ -2.05
SNU56YDR240C ALD5P40047 520 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C SIM1P40472 476 aa2.26□□□□□ -2.05
SNU56YDR240C CHS6P40955 746 aa2.26□□□□□ -2.05
SNU56YDR240C HAC1P41546 238 aa2.26□□□□□ -2.05
SNU56YDR240C ATG18P43601 500 aa2.26□□□□□ -2.05
SNU56YDR240C BNS1P50084 137 aa2.26□□□□□ -2.05
SNU56YDR240C CLD1P53264 445 aa2.26□□□□□ -2.05
SNU56YDR240C MRPS16Q02608 121 aa2.26□□□□□ -2.05
SNU56YDR240C KAP120Q02932 1032 aa2.26□□□□□ -2.05
SNU56YDR240C YMR102CQ03177 834 aa2.26□□□□□ -2.05
SNU56YDR240C PGA3Q12746 312 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C ADE4P04046 510 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C CDC50P25656 391 aa2.26□□□□□ -2.05
SNU56YDR240C DPH2P32461 534 aa2.26□□□□□ -2.05
SNU56YDR240C TFB1P32776 642 aa2.26□□□□□ -2.05
SNU56YDR240C NFU1P32860 256 aa2.26□□□□□ -2.05
SNU56YDR240C PTI1P39927 425 aaPredicted RBP2.26□□□□□ -2.05
SNU56YDR240C AIM24P47127 394 aa2.26□□□□□ -2.05
SNU56YDR240C ARX1Q03862 593 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C DIS3Q08162 1001 aaKnown RBP2.26□□□□□ -2.05
SNU56YDR240C EAF3Q12432 401 aa2.26□□□□□ -2.05
SNU56YDR240C ANR2P36090 516 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms