RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C TAF12Q03761 539 aa1.43□□□□□ -2.18
CSN9YDR179C MDM36Q06820 579 aa1.43□□□□□ -2.18
CSN9YDR179C LOT6Q07923 191 aa1.43□□□□□ -2.18
CSN9YDR179C RAX1Q08760 435 aa1.43□□□□□ -2.18
CSN9YDR179C SEC63P14906 663 aa1.42□□□□□ -2.18
CSN9YDR179C AAC3P18238 307 aa1.42□□□□□ -2.18
CSN9YDR179C RAD57P25301 460 aa1.42□□□□□ -2.18
CSN9YDR179C DEP1P31385 405 aa1.42□□□□□ -2.18
CSN9YDR179C ZUO1P32527 433 aaKnown RBP1.42□□□□□ -2.18
CSN9YDR179C RFC3P38629 340 aa1.42□□□□□ -2.18
CSN9YDR179C BAT1P38891 393 aaKnown RBP1.42□□□□□ -2.18
CSN9YDR179C YEL057CP39983 233 aa1.42□□□□□ -2.18
CSN9YDR179C FMS1P50264 508 aa1.42□□□□□ -2.18
CSN9YDR179C ATP22P50273 684 aaPredicted RBP1.42□□□□□ -2.18
CSN9YDR179C YGL262WP53054 175 aa1.42□□□□□ -2.18
CSN9YDR179C MRM2P53123 320 aa1.42□□□□□ -2.18
CSN9YDR179C YGR018CP53211 109 aa1.42□□□□□ -2.18
CSN9YDR179C GPI15P53961 229 aa1.42□□□□□ -2.18
CSN9YDR179C DIA1P54005 336 aa1.42□□□□□ -2.18
CSN9YDR179C RPT6Q01939 405 aaKnown RBP1.42□□□□□ -2.18
CSN9YDR179C OAZ1Q02803 292 aa1.42□□□□□ -2.18
CSN9YDR179C VTA1Q06263 330 aa1.42□□□□□ -2.18
CSN9YDR179C SMC5Q08204 1093 aa1.42□□□□□ -2.18
CSN9YDR179C RIM20Q12033 661 aa1.42□□□□□ -2.18
CSN9YDR179C SPO12P17123 173 aa1.41□□□□□ -2.18
CSN9YDR179C CLC1P17891 233 aa1.41□□□□□ -2.18
CSN9YDR179C YCL068CP25593 260 aa1.41□□□□□ -2.18
CSN9YDR179C SIN4P32259 974 aa1.41□□□□□ -2.18
CSN9YDR179C TFB1P32776 642 aa1.41□□□□□ -2.18
CSN9YDR179C COX13P32799 129 aa1.41□□□□□ -2.18
CSN9YDR179C RCK2P38623 610 aa1.41□□□□□ -2.18
CSN9YDR179C SBE22P38814 852 aa1.41□□□□□ -2.18
CSN9YDR179C UTP9P38882 575 aaKnown RBP1.41□□□□□ -2.18
CSN9YDR179C YAL037WP39728 267 aa1.41□□□□□ -2.18
CSN9YDR179C ATG18P43601 500 aa1.41□□□□□ -2.18
CSN9YDR179C AIM24P47127 394 aa1.41□□□□□ -2.18
CSN9YDR179C UPF3P48412 387 aaKnown RBP1.41□□□□□ -2.18
CSN9YDR179C YMR102CQ03177 834 aa1.41□□□□□ -2.18
CSN9YDR179C RRP9Q06506 573 aaKnown RBP1.41□□□□□ -2.18
CSN9YDR179C SRL2Q12020 392 aa1.41□□□□□ -2.18
CSN9YDR179C ILV5P06168 395 aaKnown RBP1.4□□□□□ -2.19
CSN9YDR179C ZRC1P20107 442 aa1.4□□□□□ -2.19
CSN9YDR179C KRE2P27809 442 aa1.4□□□□□ -2.19
CSN9YDR179C TPS2P31688 896 aaKnown RBP1.4□□□□□ -2.19
CSN9YDR179C PHA2P32452 334 aa1.4□□□□□ -2.19
CSN9YDR179C PFF1P38244 976 aa1.4□□□□□ -2.19
CSN9YDR179C YER184CP39961 794 aa1.4□□□□□ -2.19
CSN9YDR179C AIP1P46680 615 aaKnown RBP1.4□□□□□ -2.19
CSN9YDR179C BNS1P50084 137 aa1.4□□□□□ -2.19
CSN9YDR179C PRM6Q04705 352 aa1.4□□□□□ -2.19
CSN9YDR179C PIN3Q06449 215 aa1.4□□□□□ -2.19
CSN9YDR179C MAS2P11914 482 aa1.39□□□□□ -2.19
CSN9YDR179C YEF1P32622 495 aa1.39□□□□□ -2.19
CSN9YDR179C ANR2P36090 516 aaPredicted RBP1.39□□□□□ -2.19
CSN9YDR179C YNL208WP40159 199 aaKnown RBP1.39□□□□□ -2.19
CSN9YDR179C MET18P40469 1032 aa1.39□□□□□ -2.19
CSN9YDR179C SPO22P40511 975 aa1.39□□□□□ -2.19
CSN9YDR179C ARF3P40994 183 aaRIP-Chip data1.39□□□□□ -2.19not detected
CSN9YDR179C EGT2P42835 1041 aa1.39□□□□□ -2.19
CSN9YDR179C RPS0BP46654 252 aaKnown RBP1.39□□□□□ -2.19
CSN9YDR179C JJJ1P53863 590 aa1.39□□□□□ -2.19
CSN9YDR179C KTR5P53966 522 aaPredicted RBP1.39□□□□□ -2.19
CSN9YDR179C SKI8Q02793 397 aaPredicted RBP1.39□□□□□ -2.19
CSN9YDR179C YLR345WQ06137 509 aa1.39□□□□□ -2.19
CSN9YDR179C YDR056CQ12025 205 aa1.39□□□□□ -2.19
CSN9YDR179C BUG1Q12191 341 aa1.39□□□□□ -2.19
CSN9YDR179C EAF3Q12432 401 aa1.39□□□□□ -2.19
CSN9YDR179C APC2Q12440 853 aa1.39□□□□□ -2.19
CSN9YDR179C CEX1Q12453 761 aa1.39□□□□□ -2.19
CSN9YDR179C HTZ1Q12692 134 aaKnown RBP1.39□□□□□ -2.19
CSN9YDR179C NAG1Q8TGN9 163 aa1.39□□□□□ -2.19
CSN9YDR179C SCEIP03882 235 aa1.38□□□□□ -2.19
CSN9YDR179C PIS1P06197 220 aaKnown RBP1.38□□□□□ -2.19
CSN9YDR179C STE7P06784 515 aa1.38□□□□□ -2.19
CSN9YDR179C RHB1P25378 209 aa1.38□□□□□ -2.19
CSN9YDR179C ECT1P33412 323 aa1.38□□□□□ -2.19
CSN9YDR179C MRPL27P36526 146 aaPredicted RBP1.38□□□□□ -2.19
CSN9YDR179C APE3P37302 537 aaKnown RBP1.38□□□□□ -2.19
CSN9YDR179C ATP3P38077 311 aaKnown RBP1.38□□□□□ -2.19
CSN9YDR179C YBR056WP38081 501 aa1.38□□□□□ -2.19
CSN9YDR179C PTI1P39927 425 aaPredicted RBP1.38□□□□□ -2.19
CSN9YDR179C IGD1P43598 195 aa1.38□□□□□ -2.19
CSN9YDR179C MNP1P53163 194 aaPredicted RBP1.38□□□□□ -2.19
CSN9YDR179C CCE1Q03702 353 aa1.38□□□□□ -2.19
CSN9YDR179C RKM1Q08961 583 aaPredicted RBP1.38□□□□□ -2.19
CSN9YDR179C ATG34Q12292 412 aa1.38□□□□□ -2.19
CSN9YDR179C CCH1P50077 2039 aa1.38□□□□□ -2.19
CSN9YDR179C TPI1P00942 248 aaKnown RBP1.37□□□□□ -2.19
CSN9YDR179C HOM3P10869 527 aa1.37□□□□□ -2.19
CSN9YDR179C MET8P15807 274 aa1.37□□□□□ -2.19
CSN9YDR179C PPH22P23595 377 aa1.37□□□□□ -2.19
CSN9YDR179C GPI10P30777 616 aa1.37□□□□□ -2.19
CSN9YDR179C NTC20P38302 140 aaPredicted RBP1.37□□□□□ -2.19
CSN9YDR179C RRP4P38792 359 aaKnown RBP1.37□□□□□ -2.19
CSN9YDR179C LCB3P47013 409 aa1.37□□□□□ -2.19
CSN9YDR179C PHB2P50085 310 aa1.37□□□□□ -2.19
CSN9YDR179C HOT1Q03213 719 aa1.37□□□□□ -2.19
CSN9YDR179C RRP45Q05636 305 aaKnown RBP1.37□□□□□ -2.19
CSN9YDR179C SLF1Q12034 447 aaKnown RBP1.37□□□□□ -2.19
CSN9YDR179C RPS19AP07280 144 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms