RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	HCS1	P34243	683 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	STV1	P37296	890 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	MRX3	P38172	270 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	RFS1	P38234	210 aa	Known RBP	4.06	□□□□□ -1.76
HSP42	YDR171W	VPS45	P38932	577 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	PEP8	P40335	379 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	TMA108	P40462	946 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	AGP3	P43548	558 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	PHO86	P46956	311 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	CTK2	P46962	323 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	GET1	P53192	235 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	NOP19	P53317	196 aa	Predicted RBP	4.06	□□□□□ -1.76
HSP42	YDR171W	RPT4	P53549	437 aa	Known RBP	4.06	□□□□□ -1.76
HSP42	YDR171W	DML1	Q03652	475 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	BUD22	Q04347	519 aa	Known RBP	4.06	□□□□□ -1.76
HSP42	YDR171W	RCO1	Q04779	684 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	COA4	Q05809	96 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	YEH2	Q07950	538 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	IMA2	Q08295	589 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	AAD15	Q08361	143 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	PSY3	Q12318	242 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	AVL9	Q12500	764 aa		4.06	□□□□□ -1.76
HSP42	YDR171W	MOT1	P32333	1867 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	CAR1	P00812	333 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	HIS3	P06633	220 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	RAP1	P11938	827 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	SEN2	P16658	377 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	PRE8	P23639	250 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	SPB1	P25582	841 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	CSM1	P25651	190 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	CYS4	P32582	507 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	YSC83	P32792	385 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	SRB2	P34162	210 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	PEX5	P35056	612 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	CLG1	P35190	452 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	CSG2	P35206	410 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	YBR139W	P38109	508 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	MUM2	P38236	366 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	SLX1	P38324	304 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	BZZ1	P38822	633 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	SCC4	P40090	624 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	UBP8	P50102	471 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	RBG2	P53295	368 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	IMP4	P53941	290 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	RPA49	Q01080	415 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	YET2	Q04210	160 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	TAF11	Q04226	346 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	DYN3	Q04949	312 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	ARP9	Q05123	467 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	PEX10	Q05568	337 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	KAP95	Q06142	861 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	SKG3	Q06315	1026 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	MCP2	Q06567	569 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	FMP45	Q07651	309 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	ENT4	Q07872	247 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	YOL159C	Q08300	171 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	CUE5	Q08412	411 aa	Known RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	MED2	Q12124	431 aa		4.05	□□□□□ -1.76
HSP42	YDR171W	HSH49	Q99181	213 aa	Predicted RBP	4.05	□□□□□ -1.76
HSP42	YDR171W	PMD1	P32634	1753 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	LAA1	P39526	2014 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YLR278C	Q05854	1341 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YBR085C-A	O43137	85 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	TEF1	P02994	458 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	CDC31	P06704	161 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	FUM1	P08417	488 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	TCP1	P12612	559 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	EST1	P17214	699 aa	Predicted RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	AIM17	P23180	465 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	TKL1	P23254	680 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	DAL2	P25335	343 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	POL4	P25615	582 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	CMK1	P27466	446 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	KRE2	P27809	442 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	CHS3	P29465	1165 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	CRM1	P30822	1084 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	HIR2	P32480	875 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	NUP2	P32499	720 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	SMI1	P32566	505 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	TMT1	P32643	299 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	SKG6	P32900	734 aa	Predicted RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	GDH2	P33327	1092 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	YKL063C	P35725	167 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YBR241C	P38142	488 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	GND1	P38720	489 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	YDR089W	P38966	869 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	CCT6	P39079	546 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	KRE29	P40026	464 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	DSE1	P40077	573 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YER137C	P40083	148 aa	Known RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	YJR061W	P40355	935 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YRB2	P40517	327 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	YIR016W	P40572	265 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	ALB1	P47019	175 aa	Predicted RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	VPS25	P47142	202 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	RRP17	Q04031	235 aa	Predicted RBP	4.04	□□□□□ -1.76
HSP42	YDR171W	GMC2	Q06201	188 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	LOT6	Q07923	191 aa		4.04	□□□□□ -1.76
HSP42	YDR171W	THI20	Q08224	551 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms