RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TRX1P22217 103 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W TOM20P35180 183 aa2.42□□□□□ -2.02
VPS41YDR080W LDB7P38210 180 aa2.42□□□□□ -2.02
VPS41YDR080W YBP1P38315 674 aa2.42□□□□□ -2.02
VPS41YDR080W OTU2P38747 307 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W UBA4P38820 440 aa2.42□□□□□ -2.02
VPS41YDR080W YHR182WP38870 785 aa2.42□□□□□ -2.02
VPS41YDR080W LAS21P40367 830 aa2.42□□□□□ -2.02
VPS41YDR080W ARX1Q03862 593 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W NRT1Q08485 598 aa2.42□□□□□ -2.02
VPS41YDR080W YFL068WP0CX99 160 aa2.41□□□□□ -2.02
VPS41YDR080W YLL066W-AP0CY00 160 aa2.41□□□□□ -2.02
VPS41YDR080W YLL067W-AP0CY01 160 aa2.41□□□□□ -2.02
VPS41YDR080W GID7P25569 745 aa2.41□□□□□ -2.02
VPS41YDR080W SSH4P32343 579 aa2.41□□□□□ -2.02
VPS41YDR080W KRE6P32486 720 aa2.41□□□□□ -2.02
VPS41YDR080W SPC72P39723 622 aa2.41□□□□□ -2.02
VPS41YDR080W RGI2P40188 164 aa2.41□□□□□ -2.02
VPS41YDR080W MEP2P41948 499 aa2.41□□□□□ -2.02
VPS41YDR080W QRI7P43122 407 aa2.41□□□□□ -2.02
VPS41YDR080W MRS2Q01926 470 aa2.41□□□□□ -2.02
VPS41YDR080W ELP3Q02908 557 aaKnown RBP2.41□□□□□ -2.02
VPS41YDR080W NGL3Q03210 505 aa2.41□□□□□ -2.02
VPS41YDR080W REX3Q12090 404 aa2.41□□□□□ -2.02
VPS41YDR080W YLL056CQ12177 298 aa2.41□□□□□ -2.02
VPS41YDR080W YBR255C-AQ3E776 120 aa2.41□□□□□ -2.02
VPS41YDR080W KAR3P17119 729 aa2.41□□□□□ -2.02
VPS41YDR080W CNA1P23287 553 aa2.41□□□□□ -2.02
VPS41YDR080W PTC6P25646 442 aa2.41□□□□□ -2.02
VPS41YDR080W MSP1P28737 362 aa2.41□□□□□ -2.02
VPS41YDR080W YER130CP39959 443 aa2.41□□□□□ -2.02
VPS41YDR080W ATM1P40416 690 aa2.41□□□□□ -2.02
VPS41YDR080W HOC1P47124 396 aa2.41□□□□□ -2.02
VPS41YDR080W SED5Q01590 340 aa2.41□□□□□ -2.02
VPS41YDR080W YSA1Q01976 231 aa2.41□□□□□ -2.02
VPS41YDR080W NUP100Q02629 959 aa2.41□□□□□ -2.02
VPS41YDR080W VTA1Q06263 330 aa2.41□□□□□ -2.02
VPS41YDR080W GPA1P08539 472 aa2.4□□□□□ -2.02
VPS41YDR080W NAM9P27929 486 aa2.4□□□□□ -2.02
VPS41YDR080W SFC1P33303 322 aa2.4□□□□□ -2.02
VPS41YDR080W TIP20P33891 701 aa2.4□□□□□ -2.02
VPS41YDR080W YHR210CP38893 341 aa2.4□□□□□ -2.02
VPS41YDR080W YAT2P40017 923 aa2.4□□□□□ -2.02
VPS41YDR080W YJR030CP47101 745 aa2.4□□□□□ -2.02
VPS41YDR080W RPN14P53196 417 aa2.4□□□□□ -2.02
VPS41YDR080W JJJ1P53863 590 aa2.4□□□□□ -2.02
VPS41YDR080W BET4Q00618 327 aa2.4□□□□□ -2.02
VPS41YDR080W LSP1Q12230 341 aaKnown RBP2.4□□□□□ -2.02
VPS41YDR080W YOR032W-AQ8TGS1 66 aa2.4□□□□□ -2.02
VPS41YDR080W GAL1P04385 528 aa2.4□□□□□ -2.03
VPS41YDR080W PEP5P12868 1029 aa2.4□□□□□ -2.03
VPS41YDR080W FAA1P30624 700 aaKnown RBP2.4□□□□□ -2.03
VPS41YDR080W NIC96P34077 839 aa2.4□□□□□ -2.03
VPS41YDR080W HES1P35843 434 aa2.4□□□□□ -2.03
VPS41YDR080W MAK5P38112 773 aaPredicted RBP2.4□□□□□ -2.03
VPS41YDR080W SMC2P38989 1170 aaKnown RBP2.4□□□□□ -2.03
VPS41YDR080W SRL1Q08673 210 aa2.4□□□□□ -2.03
VPS41YDR080W COX17Q12287 69 aa2.4□□□□□ -2.03
VPS41YDR080W RPC25P35718 212 aa2.4□□□□□ -2.03
VPS41YDR080W MUD2P36084 527 aaKnown RBP2.4□□□□□ -2.03
VPS41YDR080W FAD1P38913 306 aa2.4□□□□□ -2.03
VPS41YDR080W YMR124WP39523 943 aaKnown RBP2.4□□□□□ -2.03
VPS41YDR080W SAW1P39735 261 aa2.4□□□□□ -2.03
VPS41YDR080W YGR021WP53212 290 aa2.4□□□□□ -2.03
VPS41YDR080W YGR079WP53249 370 aa2.4□□□□□ -2.03
VPS41YDR080W YDR541CQ03049 344 aa2.4□□□□□ -2.03
VPS41YDR080W YLR049CQ12110 428 aa2.4□□□□□ -2.03
VPS41YDR080W CDC24P11433 854 aaPredicted RBP2.39□□□□□ -2.03
VPS41YDR080W CMK1P27466 446 aaKnown RBP2.39□□□□□ -2.03
VPS41YDR080W MEI4P29467 408 aa2.39□□□□□ -2.03
VPS41YDR080W DBF4P32325 704 aa2.39□□□□□ -2.03
VPS41YDR080W SMI1P32566 505 aa2.39□□□□□ -2.03
VPS41YDR080W YET1P35723 206 aa2.39□□□□□ -2.03
VPS41YDR080W YBR138CP38277 524 aa2.39□□□□□ -2.03
VPS41YDR080W JHD2P47156 728 aaPredicted RBP2.39□□□□□ -2.03
VPS41YDR080W MSY1P48527 492 aa2.39□□□□□ -2.03
VPS41YDR080W FRE4P53746 719 aa2.39□□□□□ -2.03
VPS41YDR080W ENT4Q07872 247 aa2.39□□□□□ -2.03
VPS41YDR080W ATX2Q12067 313 aa2.39□□□□□ -2.03
VPS41YDR080W ATG9Q12142 997 aa2.39□□□□□ -2.03
VPS41YDR080W MET8P15807 274 aa2.39□□□□□ -2.03
VPS41YDR080W DIA4P38705 446 aaPredicted RBP2.39□□□□□ -2.03
VPS41YDR080W ARN1P38731 627 aa2.39□□□□□ -2.03
VPS41YDR080W FRT2P39734 528 aa2.39□□□□□ -2.03
VPS41YDR080W YIL067CP40514 678 aa2.39□□□□□ -2.03
VPS41YDR080W CUP9P41817 306 aa2.39□□□□□ -2.03
VPS41YDR080W TES1P41903 349 aaKnown RBP2.39□□□□□ -2.03
VPS41YDR080W PMT4P46971 762 aa2.39□□□□□ -2.03
VPS41YDR080W ATG36P46983 293 aa2.39□□□□□ -2.03
VPS41YDR080W MPS2P53159 387 aa2.39□□□□□ -2.03
VPS41YDR080W PET117Q02771 107 aa2.39□□□□□ -2.03
VPS41YDR080W OPY2Q06810 360 aa2.39□□□□□ -2.03
VPS41YDR080W TPO4Q12256 659 aa2.39□□□□□ -2.03
VPS41YDR080W BRR1Q99177 341 aaPredicted RBP2.39□□□□□ -2.03
VPS41YDR080W YER145C-AA0A023PYF4 145 aa2.38□□□□□ -2.03
VPS41YDR080W TPS2P31688 896 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W PRP18P33411 251 aaPredicted RBP2.38□□□□□ -2.03
VPS41YDR080W SDS22P36047 338 aa2.38□□□□□ -2.03
VPS41YDR080W TPA1P40032 644 aaKnown RBP2.38□□□□□ -2.03
VPS41YDR080W ALG8P40351 577 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms