RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	LEU5	P38702	357 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	YMR147W	P40218	223 aa	Known RBP	5.64	□□□□□ -1.51
TRP1	YDR007W	UTP18	P40362	594 aa	Predicted RBP	5.64	□□□□□ -1.51
TRP1	YDR007W	CFD1	P40558	293 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	TMA22	P47089	198 aa	Predicted RBP	5.64	□□□□□ -1.51
TRP1	YDR007W	ALT2	P52892	507 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	NUP100	Q02629	959 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	SWP1	Q02795	286 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	DML1	Q03652	475 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	PRP42	Q03776	544 aa	Known RBP	5.64	□□□□□ -1.51
TRP1	YDR007W	DCS1	Q06151	350 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	VAC14	Q06708	880 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	RSA1	Q08932	381 aa		5.64	□□□□□ -1.51
TRP1	YDR007W	PGK1	P00560	416 aa	Known RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	RIP1	P08067	215 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	GCN3	P14741	305 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	BUD23	P25627	275 aa	Predicted RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	SIN4	P32259	974 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	NIP1	P32497	812 aa	Known RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	GYP6	P32806	458 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	ARC19	P33204	171 aa	Known RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	YKR015C	P36111	568 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	SIP3	P38717	1229 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	FLO5	P38894	1075 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	YIL024C	P40543	189 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	ALB1	P47019	175 aa	Predicted RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	BRO1	P48582	844 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	YGR266W	P53326	701 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	RHO4	Q00246	291 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
TRP1	YDR007W	DIS3	Q08162	1001 aa	Known RBP	5.63	□□□□□ -1.51
TRP1	YDR007W	APC5	Q08683	685 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	ATP16	Q12165	160 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	CRC1	Q12289	327 aa		5.63	□□□□□ -1.51
TRP1	YDR007W	HIS3	P06633	220 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	RDS1	P25611	832 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	FUN19	P28003	413 aa	Predicted RBP	5.62	□□□□□ -1.51
TRP1	YDR007W	BEM1	P29366	551 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	SRB4	P32569	687 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	REC114	P32841	428 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	CBP4	P37267	147 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	ECM27	P47144	725 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	RHO5	P53879	331 aa	Known RBP	5.62	□□□□□ -1.51
TRP1	YDR007W	SMA1	Q02651	245 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	EKI1	Q03764	534 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	ECI1	Q05871	280 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	NNT1	Q05874	261 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	RKM1	Q08961	583 aa	Predicted RBP	5.62	□□□□□ -1.51
TRP1	YDR007W	YPL150W	Q12152	901 aa		5.62	□□□□□ -1.51
TRP1	YDR007W	DUR1,2	P32528	1835 aa	Known RBP	5.62	□□□□□ -1.51
TRP1	YDR007W	SUC2	P00724	532 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	MES1	P00958	751 aa	Known RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	BAR1	P12630	587 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	RPB4	P20433	221 aa	Predicted RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	GID7	P25569	745 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	HSP30	P25619	332 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	KRE2	P27809	442 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	ATP11	P32453	318 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	ATO2	P32907	282 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	DAD2	P36162	133 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	RFT1	P38206	574 aa	Predicted RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	POP2	P39008	433 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	PCF11	P39081	626 aa	Predicted RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	YJR054W	P47114	497 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	ESBP6	P53918	673 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	LGE1	Q02796	332 aa	Known RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	ECM11	Q04110	302 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	GLO2	Q05584	274 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	DIC1	Q06143	298 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	YLR456W	Q06199	204 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	SEC10	Q06245	871 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	KEL3	Q08979	651 aa	Predicted RBP	5.61	□□□□□ -1.51
TRP1	YDR007W	MTR10	Q99189	972 aa		5.61	□□□□□ -1.51
TRP1	YDR007W	YLR278C	Q05854	1341 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	RPL6B	P05739	176 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	RPL22A	P05749	121 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	RPS19A	P07280	144 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	RPS19B	P07281	144 aa	Predicted RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	SNA3	P14359	133 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	YAP1	P19880	650 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	TRX1	P22217	103 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	DPB2	P24482	689 aa	Predicted RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	RPS2	P25443	254 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	UTP11	P34247	250 aa	Predicted RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	YKL063C	P35725	167 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	ZTA1	P38230	334 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	WSS1	P38838	269 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	VHS2	P40463	436 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	TOM22	P49334	152 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	MLC1	P53141	149 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	RPL6A	Q02326	176 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	SRL4	Q03085	281 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	PPM1	Q04081	328 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	HCR1	Q05775	265 aa	Known RBP	5.6	□□□□□ -1.51
TRP1	YDR007W	GSH2	Q08220	491 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	RRD2	Q12461	358 aa		5.6	□□□□□ -1.51
TRP1	YDR007W	POM152	P39685	1337 aa		5.59	□□□□□ -1.51
TRP1	YDR007W	SEC63	P14906	663 aa		5.59	□□□□□ -1.51
TRP1	YDR007W	VMA2	P16140	517 aa	Known RBP	5.59	□□□□□ -1.51
TRP1	YDR007W	OSM1	P21375	501 aa	Known RBP	5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms