RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W PCF11P39081 626 aaPredicted RBP3.53□□□□□ -1.84
SHR3YDL212W NAT1P12945 854 aaKnown RBP3.52□□□□□ -1.85
SHR3YDL212W SPO7P18410 259 aa3.52□□□□□ -1.85
SHR3YDL212W KAP120Q02932 1032 aa3.52□□□□□ -1.85
SHR3YDL212W IRC25Q07951 179 aa3.52□□□□□ -1.85
SHR3YDL212W RRG1Q12167 365 aaPredicted RBP3.52□□□□□ -1.85
SHR3YDL212W SFI1Q12369 946 aa3.52□□□□□ -1.85
SHR3YDL212W COX3P00420 269 aa3.51□□□□□ -1.85
SHR3YDL212W IMA3P0CW40 589 aa3.51□□□□□ -1.85
SHR3YDL212W IMA4P0CW41 589 aa3.51□□□□□ -1.85
SHR3YDL212W URA4P20051 364 aa3.51□□□□□ -1.85
SHR3YDL212W RRN10P38204 145 aa3.51□□□□□ -1.85
SHR3YDL212W SBE22P38814 852 aa3.51□□□□□ -1.85
SHR3YDL212W SFH5P47008 294 aa3.51□□□□□ -1.85
SHR3YDL212W OCA2P53949 197 aa3.51□□□□□ -1.85
SHR3YDL212W HAL1Q01766 294 aa3.51□□□□□ -1.85
SHR3YDL212W DON1Q05610 365 aa3.51□□□□□ -1.85
SHR3YDL212W IMA2Q08295 589 aa3.51□□□□□ -1.85
SHR3YDL212W SRV2P17555 526 aaKnown RBP3.5□□□□□ -1.85
SHR3YDL212W NIP1P32497 812 aaKnown RBP3.5□□□□□ -1.85
SHR3YDL212W BYE1P36106 594 aa3.5□□□□□ -1.85
SHR3YDL212W AIM10P39965 576 aaKnown RBP3.5□□□□□ -1.85
SHR3YDL212W UTP18P40362 594 aaPredicted RBP3.5□□□□□ -1.85
SHR3YDL212W SIM1P40472 476 aa3.5□□□□□ -1.85
SHR3YDL212W SRB7P47822 140 aa3.5□□□□□ -1.85
SHR3YDL212W MDG1P53885 366 aa3.5□□□□□ -1.85
SHR3YDL212W NUP116Q02630 1113 aa3.5□□□□□ -1.85
SHR3YDL212W ACL4Q03771 387 aa3.5□□□□□ -1.85
SHR3YDL212W YDR131CQ03899 556 aa3.5□□□□□ -1.85
SHR3YDL212W AFI1Q99222 893 aa3.5□□□□□ -1.85
SHR3YDL212W FUR1P18562 216 aaKnown RBP3.49□□□□□ -1.85
SHR3YDL212W CLN1P20437 546 aa3.49□□□□□ -1.85
SHR3YDL212W URA7P28274 579 aaKnown RBP3.49□□□□□ -1.85
SHR3YDL212W NUP2P32499 720 aa3.49□□□□□ -1.85
SHR3YDL212W GAB1P41733 394 aa3.49□□□□□ -1.85
SHR3YDL212W MDE1P47095 244 aa3.49□□□□□ -1.85
SHR3YDL212W URH1Q04179 340 aa3.49□□□□□ -1.85
SHR3YDL212W DCS1Q06151 350 aa3.49□□□□□ -1.85
SHR3YDL212W IZH2Q12442 317 aa3.49□□□□□ -1.85
SHR3YDL212W ADK2P26364 225 aa3.48□□□□□ -1.85
SHR3YDL212W MMS4P38257 691 aa3.48□□□□□ -1.85
SHR3YDL212W YMR130WQ04223 302 aa3.48□□□□□ -1.85
SHR3YDL212W MMR1Q06324 491 aa3.48□□□□□ -1.85
SHR3YDL212W CUE5Q08412 411 aaKnown RBP3.48□□□□□ -1.85
SHR3YDL212W PLP2Q12017 286 aa3.48□□□□□ -1.85
SHR3YDL212W ATG34Q12292 412 aa3.48□□□□□ -1.85
SHR3YDL212W ADE4P04046 510 aaKnown RBP3.47□□□□□ -1.85
SHR3YDL212W REC107P21651 314 aa3.47□□□□□ -1.85
SHR3YDL212W ERV1P27882 189 aa3.47□□□□□ -1.85
SHR3YDL212W BRF1P29056 596 aa3.47□□□□□ -1.85
SHR3YDL212W CHK1P38147 527 aa3.47□□□□□ -1.85
SHR3YDL212W RAX1Q08760 435 aa3.47□□□□□ -1.85
SHR3YDL212W NAM2P11325 894 aa3.46□□□□□ -1.86
SHR3YDL212W HSP26P15992 214 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SHR3YDL212W PHA2P32452 334 aa3.46□□□□□ -1.86
SHR3YDL212W YKL097CP34245 136 aa3.46□□□□□ -1.86
SHR3YDL212W SLM4P38247 162 aa3.46□□□□□ -1.86
SHR3YDL212W MIG3P39943 394 aa3.46□□□□□ -1.86
SHR3YDL212W ERB1Q04660 807 aaKnown RBP3.46□□□□□ -1.86
SHR3YDL212W TPT1Q12272 230 aaKnown RBP3.46□□□□□ -1.86
SHR3YDL212W YDL012CQ12489 107 aa3.46□□□□□ -1.86
SHR3YDL212W YCL068CP25593 260 aa3.45□□□□□ -1.86
SHR3YDL212W MRP21P38175 177 aa3.45□□□□□ -1.86
SHR3YDL212W SER3P40054 469 aa3.45□□□□□ -1.86
SHR3YDL212W CHS6P40955 746 aa3.45□□□□□ -1.86
SHR3YDL212W TOM22P49334 152 aa3.45□□□□□ -1.86
SHR3YDL212W RRP9Q06506 573 aaKnown RBP3.45□□□□□ -1.86
SHR3YDL212W SNU66Q12420 587 aaPredicted RBP3.45□□□□□ -1.86
SHR3YDL212W ARO3P14843 370 aaKnown RBP3.44□□□□□ -1.86
SHR3YDL212W RPC53P25441 422 aa3.44□□□□□ -1.86
SHR3YDL212W HEL1P36113 551 aa3.44□□□□□ -1.86
SHR3YDL212W JNM1P36224 373 aa3.44□□□□□ -1.86
SHR3YDL212W YBR056WP38081 501 aa3.44□□□□□ -1.86
SHR3YDL212W YIL029CP40538 142 aa3.44□□□□□ -1.86
SHR3YDL212W YPS6P40583 537 aa3.44□□□□□ -1.86
SHR3YDL212W COS1P53822 381 aa3.44□□□□□ -1.86
SHR3YDL212W MTQ1P53944 314 aa3.44□□□□□ -1.86
SHR3YDL212W CCE1Q03702 353 aa3.44□□□□□ -1.86
SHR3YDL212W DPH5P32469 300 aaPredicted RBP3.43□□□□□ -1.86
SHR3YDL212W CAK1P43568 368 aaPredicted RBP3.43□□□□□ -1.86
SHR3YDL212W TCB2P48231 1178 aa3.43□□□□□ -1.86
SHR3YDL212W MRM2P53123 320 aa3.43□□□□□ -1.86
SHR3YDL212W RPT4P53549 437 aaKnown RBP3.43□□□□□ -1.86
SHR3YDL212W YLR345WQ06137 509 aa3.43□□□□□ -1.86
SHR3YDL212W BUG1Q12191 341 aa3.43□□□□□ -1.86
SHR3YDL212W MSI1P13712 422 aa3.42□□□□□ -1.86
SHR3YDL212W CLB1P24868 471 aa3.42□□□□□ -1.86
SHR3YDL212W TFB1P32776 642 aa3.42□□□□□ -1.86
SHR3YDL212W RRP1P35178 278 aaPredicted RBP3.42□□□□□ -1.86
SHR3YDL212W RTC2P38279 296 aa3.42□□□□□ -1.86
SHR3YDL212W BAT1P38891 393 aaKnown RBP3.42□□□□□ -1.86
SHR3YDL212W NOC2P39744 710 aaKnown RBP3.42□□□□□ -1.86
SHR3YDL212W ADA2Q02336 434 aa3.42□□□□□ -1.86
SHR3YDL212W RIF2Q06208 395 aa3.42□□□□□ -1.86
SHR3YDL212W MDM36Q06820 579 aa3.42□□□□□ -1.86
SHR3YDL212W SMF3Q12078 473 aaPredicted RBP3.42□□□□□ -1.86
SHR3YDL212W HOM3P10869 527 aa3.41□□□□□ -1.86
SHR3YDL212W PDX1P16451 410 aa3.41□□□□□ -1.86
SHR3YDL212W EXG1P23776 448 aaKnown RBP3.41□□□□□ -1.86
SHR3YDL212W ASC1P38011 319 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms