RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C ILS1P09436 1072 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C ADH4P10127 382 aa1.34□□□□□ -2.2
MSH3YCR092C SNF5P18480 905 aa1.34□□□□□ -2.2
MSH3YCR092C CLB3P24870 427 aa1.34□□□□□ -2.2
MSH3YCR092C DCC1P25559 380 aa1.34□□□□□ -2.2
MSH3YCR092C SYP1P25623 870 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C RPS5P26783 225 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C DPB3P27344 201 aa1.34□□□□□ -2.2
MSH3YCR092C MSP1P28737 362 aa1.34□□□□□ -2.2
MSH3YCR092C CDC11P32458 415 aa1.34□□□□□ -2.2
MSH3YCR092C SPC29P33419 253 aa1.34□□□□□ -2.2
MSH3YCR092C SPC42P36094 363 aa1.34□□□□□ -2.2
MSH3YCR092C MRPL39P36533 70 aa1.34□□□□□ -2.2
MSH3YCR092C YCR087C-AP37263 153 aa1.34□□□□□ -2.2
MSH3YCR092C CAJ1P39101 391 aa1.34□□□□□ -2.2
MSH3YCR092C NPT1P39683 429 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C SEN34P39707 275 aa1.34□□□□□ -2.2
MSH3YCR092C LTP1P40347 161 aa1.34□□□□□ -2.2
MSH3YCR092C IMA5P40884 581 aa1.34□□□□□ -2.2
MSH3YCR092C CIN1P40987 1014 aa1.34□□□□□ -2.2
MSH3YCR092C GCD10P41814 478 aa1.34□□□□□ -2.2
MSH3YCR092C MDJ2P42834 146 aa1.34□□□□□ -2.2
MSH3YCR092C GAT1P43574 510 aa1.34□□□□□ -2.2
MSH3YCR092C MIC19P43594 170 aa1.34□□□□□ -2.2
MSH3YCR092C STB4P50104 949 aa1.34□□□□□ -2.2
MSH3YCR092C YPL071CQ02864 156 aa1.34□□□□□ -2.2
MSH3YCR092C ABZ2Q03266 374 aa1.34□□□□□ -2.2
MSH3YCR092C RKM2Q03942 479 aa1.34□□□□□ -2.2
MSH3YCR092C YMR087WQ04299 284 aa1.34□□□□□ -2.2
MSH3YCR092C RBS1Q05672 457 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C ECI1Q05871 280 aa1.34□□□□□ -2.2
MSH3YCR092C VPS38Q05919 439 aa1.34□□□□□ -2.2
MSH3YCR092C HER1Q12276 1246 aa1.34□□□□□ -2.2
MSH3YCR092C NOT5Q12514 560 aaPredicted RBP1.34□□□□□ -2.2
MSH3YCR092C TAD3Q9URQ3 322 aa1.34□□□□□ -2.2
MSH3YCR092C ARG3P05150 338 aa1.33□□□□□ -2.2
MSH3YCR092C HEM2P05373 342 aa1.33□□□□□ -2.2
MSH3YCR092C SPS4P09937 338 aa1.33□□□□□ -2.2
MSH3YCR092C UNG1P12887 359 aa1.33□□□□□ -2.2
MSH3YCR092C VMA4P22203 233 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C CTR86P25355 563 aa1.33□□□□□ -2.2
MSH3YCR092C KAR4P25583 335 aa1.33□□□□□ -2.2
MSH3YCR092C URA10P30402 227 aa1.33□□□□□ -2.2
MSH3YCR092C DEP1P31385 405 aa1.33□□□□□ -2.2
MSH3YCR092C AAR2P32357 355 aaPredicted RBP1.33□□□□□ -2.2
MSH3YCR092C SPS18P32572 300 aa1.33□□□□□ -2.2
MSH3YCR092C PPZ2P33329 710 aa1.33□□□□□ -2.2
MSH3YCR092C SOR1P35497 357 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C RPC37P36121 282 aa1.33□□□□□ -2.2
MSH3YCR092C FIG1P38224 298 aa1.33□□□□□ -2.2
MSH3YCR092C YHL044WP38727 235 aa1.33□□□□□ -2.2
MSH3YCR092C TRR2P38816 342 aa1.33□□□□□ -2.2
MSH3YCR092C SPC97P38863 823 aa1.33□□□□□ -2.2
MSH3YCR092C YDR089WP38966 869 aa1.33□□□□□ -2.2
MSH3YCR092C PRM5P40476 318 aa1.33□□□□□ -2.2
MSH3YCR092C RLP7P40693 322 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C OSW7P43611 510 aa1.33□□□□□ -2.2
MSH3YCR092C CTK3P46963 296 aaPredicted RBP1.33□□□□□ -2.2
MSH3YCR092C MRK1P50873 501 aa1.33□□□□□ -2.2
MSH3YCR092C SHE4P51534 789 aa1.33□□□□□ -2.2
MSH3YCR092C DIA3P52290 468 aa1.33□□□□□ -2.2
MSH3YCR092C YMR102CQ03177 834 aa1.33□□□□□ -2.2
MSH3YCR092C RPN9Q04062 393 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C YET2Q04210 160 aa1.33□□□□□ -2.2
MSH3YCR092C ERB1Q04660 807 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C FAR10Q06001 478 aa1.33□□□□□ -2.2
MSH3YCR092C SWA2Q06677 668 aa1.33□□□□□ -2.2
MSH3YCR092C SOR2Q07786 357 aa1.33□□□□□ -2.2
MSH3YCR092C YLR462WO13556 202 aa1.33□□□□□ -2.2
MSH3YCR092C PAB1P04147 577 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
MSH3YCR092C CDC37P06101 506 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C PUT2P07275 575 aa1.33□□□□□ -2.2
MSH3YCR092C RPB4P20433 221 aaPredicted RBP1.33□□□□□ -2.2
MSH3YCR092C RPB5P20434 215 aa1.33□□□□□ -2.2
MSH3YCR092C MXR2P25566 168 aa1.33□□□□□ -2.2
MSH3YCR092C CDC15P27636 974 aa1.33□□□□□ -2.2
MSH3YCR092C ZUO1P32527 433 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C CDC5P32562 705 aa1.33□□□□□ -2.2
MSH3YCR092C MGM101P32787 269 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C TRS65P32893 560 aa1.33□□□□□ -2.2
MSH3YCR092C SPO23P33757 523 aa1.33□□□□□ -2.2
MSH3YCR092C CHK1P38147 527 aa1.33□□□□□ -2.2
MSH3YCR092C TAE1P38340 232 aa1.33□□□□□ -2.2
MSH3YCR092C CUE1P38428 203 aa1.33□□□□□ -2.2
MSH3YCR092C YHL049CP38722 271 aa1.33□□□□□ -2.2
MSH3YCR092C RCY1P39531 840 aa1.33□□□□□ -2.2
MSH3YCR092C SSP120P39931 234 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C RSP5P39940 809 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C YEL075CP39972 122 aa1.33□□□□□ -2.2
MSH3YCR092C COG3P40094 801 aa1.33□□□□□ -2.2
MSH3YCR092C YFL064CP43540 174 aa1.33□□□□□ -2.2
MSH3YCR092C SLD3P53135 668 aa1.33□□□□□ -2.2
MSH3YCR092C TRM112P53738 135 aaPredicted RBP1.33□□□□□ -2.2
MSH3YCR092C RNY1Q02933 434 aaKnown RBP1.33□□□□□ -2.2
MSH3YCR092C ECM18Q04623 453 aa1.33□□□□□ -2.2
MSH3YCR092C RCO1Q04779 684 aa1.33□□□□□ -2.2
MSH3YCR092C ORM2Q06144 216 aa1.33□□□□□ -2.2
MSH3YCR092C YLR446WQ06204 433 aa1.33□□□□□ -2.2
MSH3YCR092C RSC58Q07979 502 aa1.33□□□□□ -2.2
MSH3YCR092C RRT8Q08219 342 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms