RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A PFA4Q12006 378 aa2.23□□□□□ -2.05
VMA9YCL005W-A GET3Q12154 354 aaKnown RBP2.23□□□□□ -2.05
VMA9YCL005W-A PSY3Q12318 242 aa2.23□□□□□ -2.05
VMA9YCL005W-A LDB17Q12342 491 aa2.23□□□□□ -2.05
VMA9YCL005W-A NDJ1Q12366 352 aa2.23□□□□□ -2.05
VMA9YCL005W-A DCN1Q12395 269 aa2.23□□□□□ -2.05
VMA9YCL005W-A SPE4Q12455 300 aa2.23□□□□□ -2.05
VMA9YCL005W-A PGA3Q12746 312 aaKnown RBP2.23□□□□□ -2.05
VMA9YCL005W-A YBR255C-AQ3E776 120 aa2.23□□□□□ -2.05
VMA9YCL005W-A MED11Q99278 115 aa2.23□□□□□ -2.05
VMA9YCL005W-A YOR093CQ12275 1648 aa2.23□□□□□ -2.05
VMA9YCL005W-A VMR1P38735 1592 aa2.23□□□□□ -2.05
VMA9YCL005W-A CHC1P22137 1653 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A BUD3P25558 1636 aa2.22□□□□□ -2.05
VMA9YCL005W-A YMR084WA2P2R3 262 aa2.22□□□□□ -2.05
VMA9YCL005W-A CYB2P00175 591 aa2.22□□□□□ -2.05
VMA9YCL005W-A ATP2P00830 511 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A GCN4P03069 281 aa2.22□□□□□ -2.05
VMA9YCL005W-A GAL4P04386 881 aa2.22□□□□□ -2.05
VMA9YCL005W-A MET17P06106 444 aa2.22□□□□□ -2.05
VMA9YCL005W-A GPH1P06738 902 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A COR1P07256 457 aa2.22□□□□□ -2.05
VMA9YCL005W-A ILV2P07342 687 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A TY2A-LR1P0C2J4 438 aa2.22□□□□□ -2.05
VMA9YCL005W-A COS2P0CX12 379 aa2.22□□□□□ -2.05
VMA9YCL005W-A COS3P0CX13 379 aa2.22□□□□□ -2.05
VMA9YCL005W-A TY2A-FP0CX61 438 aa2.22□□□□□ -2.05
VMA9YCL005W-A TY2A-GR2P0CX62 438 aa2.22□□□□□ -2.05
VMA9YCL005W-A MAS1P10507 462 aa2.22□□□□□ -2.05
VMA9YCL005W-A PEP5P12868 1029 aa2.22□□□□□ -2.05
VMA9YCL005W-A STF2P16965 84 aa2.22□□□□□ -2.05
VMA9YCL005W-A TY2A-CP25383 438 aa2.22□□□□□ -2.05
VMA9YCL005W-A PTC6P25646 442 aa2.22□□□□□ -2.05
VMA9YCL005W-A LAC1P28496 418 aa2.22□□□□□ -2.05
VMA9YCL005W-A RNP1P32385 249 aa2.22□□□□□ -2.05
VMA9YCL005W-A NDC1P32500 655 aa2.22□□□□□ -2.05
VMA9YCL005W-A PRP21P32524 280 aaPredicted RBP2.22□□□□□ -2.05
VMA9YCL005W-A DOA4P32571 926 aa2.22□□□□□ -2.05
VMA9YCL005W-A ORC2P32833 620 aa2.22□□□□□ -2.05
VMA9YCL005W-A PTM1P32857 523 aa2.22□□□□□ -2.05
VMA9YCL005W-A GDH2P33327 1092 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A YPT52P36018 234 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A SRP102P36057 244 aaPredicted RBP2.22□□□□□ -2.05
VMA9YCL005W-A RPF2P36160 344 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A CST26P38226 397 aa2.22□□□□□ -2.05
VMA9YCL005W-A PEX32P38292 413 aa2.22□□□□□ -2.05
VMA9YCL005W-A FTH1P38310 465 aa2.22□□□□□ -2.05
VMA9YCL005W-A DIA4P38705 446 aaPredicted RBP2.22□□□□□ -2.05
VMA9YCL005W-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VMA9YCL005W-A SMF2P38778 549 aa2.22□□□□□ -2.05
VMA9YCL005W-A BIG1P38813 335 aa2.22□□□□□ -2.05
VMA9YCL005W-A MLH1P38920 769 aa2.22□□□□□ -2.05
VMA9YCL005W-A RPH1P39956 796 aa2.22□□□□□ -2.05
VMA9YCL005W-A NOP16P40007 231 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A PHM8P40025 321 aa2.22□□□□□ -2.05
VMA9YCL005W-A NDE1P40215 560 aa2.22□□□□□ -2.05
VMA9YCL005W-A LAS21P40367 830 aa2.22□□□□□ -2.05
VMA9YCL005W-A SEC28P40509 296 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A MAM33P40513 266 aa2.22□□□□□ -2.05
VMA9YCL005W-A GTT1P40582 234 aa2.22□□□□□ -2.05
VMA9YCL005W-A CIN1P40987 1014 aa2.22□□□□□ -2.05
VMA9YCL005W-A FAR3P46671 204 aa2.22□□□□□ -2.05
VMA9YCL005W-A MNN5P46982 586 aa2.22□□□□□ -2.05
VMA9YCL005W-A MDE1P47095 244 aa2.22□□□□□ -2.05
VMA9YCL005W-A YJR030CP47101 745 aa2.22□□□□□ -2.05
VMA9YCL005W-A ECM27P47144 725 aa2.22□□□□□ -2.05
VMA9YCL005W-A PAC10P48363 199 aa2.22□□□□□ -2.05
VMA9YCL005W-A UPF3P48412 387 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A RAD17P48581 401 aa2.22□□□□□ -2.05
VMA9YCL005W-A RPS12P48589 143 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A TOM22P49334 152 aa2.22□□□□□ -2.05
VMA9YCL005W-A DIE2P50076 525 aa2.22□□□□□ -2.05
VMA9YCL005W-A ARO8P53090 500 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A YNR061CP53747 219 aa2.22□□□□□ -2.05
VMA9YCL005W-A YNR068CP53754 272 aa2.22□□□□□ -2.05
VMA9YCL005W-A BSC5P53755 489 aa2.22□□□□□ -2.05
VMA9YCL005W-A CAF40P53829 373 aa2.22□□□□□ -2.05
VMA9YCL005W-A VPS9P54787 451 aa2.22□□□□□ -2.05
VMA9YCL005W-A HXT11P54862 567 aa2.22□□□□□ -2.05
VMA9YCL005W-A SKI8Q02793 397 aaPredicted RBP2.22□□□□□ -2.05
VMA9YCL005W-A YPL071CQ02864 156 aa2.22□□□□□ -2.05
VMA9YCL005W-A IRC4Q03036 179 aa2.22□□□□□ -2.05
VMA9YCL005W-A RSC9Q03124 581 aa2.22□□□□□ -2.05
VMA9YCL005W-A YML122CQ03207 126 aa2.22□□□□□ -2.05
VMA9YCL005W-A TY2A-DR2Q03483 438 aa2.22□□□□□ -2.05
VMA9YCL005W-A SCS7Q03529 384 aa2.22□□□□□ -2.05
VMA9YCL005W-A SNU56Q03782 492 aaKnown RBP2.22□□□□□ -2.05
VMA9YCL005W-A YDR109CQ04585 715 aa2.22□□□□□ -2.05
VMA9YCL005W-A VID22Q05934 901 aa2.22□□□□□ -2.05
VMA9YCL005W-A BUR2Q05949 395 aa2.22□□□□□ -2.05
VMA9YCL005W-A NEJ1Q06148 342 aa2.22□□□□□ -2.05
VMA9YCL005W-A GMC2Q06201 188 aa2.22□□□□□ -2.05
VMA9YCL005W-A FMP45Q07651 309 aa2.22□□□□□ -2.05
VMA9YCL005W-A YLL007CQ07799 665 aa2.22□□□□□ -2.05
VMA9YCL005W-A GSH2Q08220 491 aa2.22□□□□□ -2.05
VMA9YCL005W-A SGT1Q08446 395 aa2.22□□□□□ -2.05
VMA9YCL005W-A SYC1Q08553 188 aaPredicted RBP2.22□□□□□ -2.05
VMA9YCL005W-A YPL199CQ08954 240 aa2.22□□□□□ -2.05
VMA9YCL005W-A YPR202WQ08993 238 aa2.22□□□□□ -2.05
VMA9YCL005W-A YLR053CQ12026 108 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms