RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeast

Gene HHF1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHF1	YBR009C	UBA4	P38820	440 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	FET3	P38993	636 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	ARG2	P40360	574 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	NDC80	P40460	691 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	POP1	P41812	875 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	OTU1	P43558	301 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	LOH1	P47055	219 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	MNN10	P50108	393 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	PMT5	P52867	743 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	SHR3	Q02774	210 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	SRL4	Q03085	281 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	MRPS17	Q03246	237 aa	Predicted RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	SNU56	Q03782	492 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	HSP31	Q04432	237 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	RTN1	Q04947	295 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	SYO1	Q07395	620 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	BSC6	Q08280	497 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	GLE1	Q12315	538 aa		3.12	□□□□□ -1.91
HHF1	YBR009C	AIM45	Q12480	344 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	RRP12	Q12754	1228 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	BRR1	Q99177	341 aa	Predicted RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	SEC3	P33332	1336 aa	Known RBP	3.12	□□□□□ -1.91
HHF1	YBR009C	ARG4	P04076	463 aa	Predicted RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	OPI3	P05375	206 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	CDC23	P16522	626 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	RPI1	P23250	407 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	STE11	P23561	717 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	DBR1	P24309	405 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	DAL2	P25335	343 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YCR006C	P25350	157 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	CIN8	P27895	1000 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	FUN19	P28003	413 aa	Predicted RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	ICL1	P28240	557 aa	Predicted RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	DEG1	P31115	442 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	MSK1	P32048	576 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	PRO3	P32263	286 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	REC114	P32841	428 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	SPT10	P35208	640 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	RPC37	P36121	282 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	CBR1	P38626	284 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	ERV46	P39727	415 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YER079W	P40052	210 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	FMC1	P40491	155 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	TDA10	P42938	290 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	FMP33	P46998	180 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YJL118W	P47022	219 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YDL186W	P48568	277 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YGL117W	P53133	265 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	HOP2	P53187	214 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YGR117C	P53270	476 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	SMM1	P53720	384 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	CPR8	P53728	308 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YIF1	P53845	314 aa	Known RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	KTR6	P54070	446 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	SMX3	P54999	86 aa	Predicted RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	RNT1	Q02555	471 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	MRP51	Q02950	344 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	GIP3	Q03016	1276 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	AIM33	Q04516	312 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	GTO3	Q04806	366 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	COX20	Q04935	205 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	SNT309	Q06091	175 aa	Predicted RBP	3.11	□□□□□ -1.91
HHF1	YBR009C	CTS2	Q06350	511 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	AAD15	Q08361	143 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	YOR389W	Q08912	624 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	AFT2	Q08957	416 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	BTS1	Q12051	335 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	PUS9	Q12069	462 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	FRE7	Q12333	620 aa		3.11	□□□□□ -1.91
HHF1	YBR009C	JIP3	O13555	125 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	RPL7A	P05737	244 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	GDH1	P07262	454 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	PPR1	P07272	904 aa	Predicted RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	DST1	P07273	309 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	MSF1	P08425	469 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	IMA3	P0CW40	589 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	IMA4	P0CW41	589 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	RPL12A	P0CX53	165 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	RPL12B	P0CX54	165 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	POL30	P15873	258 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	FUS3	P16892	353 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	DAL81	P21657	970 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	GPI12	P23797	304 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	RAD57	P25301	460 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	RVS161	P25343	265 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	YCR016W	P25617	290 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	CWP1	P28319	239 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	CTS1	P29029	562 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	ACH1	P32316	526 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	MSS51	P32335	436 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	YMC2	P38087	329 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	ROT2	P38138	954 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	YMR262W	P38430	313 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	PCL5	P38794	229 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	YIL060W	P40519	144 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	TRS85	P46944	698 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	STE24	P47154	453 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	TRF5	P48561	642 aa	Known RBP	3.1	□□□□□ -1.91
HHF1	YBR009C	UBP8	P50102	471 aa		3.1	□□□□□ -1.91
HHF1	YBR009C	SNZ1	Q03148	297 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms