RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	ECM27	P47144	725 aa		0.84	□□□□□ -2.27
snR8	snR8	AZR1	P50080	613 aa		0.84	□□□□□ -2.27
snR8	snR8	YGR067C	P53243	804 aa		0.84	□□□□□ -2.27
snR8	snR8	SSM4	P40318	1319 aa		0.84	□□□□□ -2.28
snR8	snR8	ATP10	P18496	279 aa		0.83	□□□□□ -2.28
snR8	snR8	RAD57	P25301	460 aa		0.83	□□□□□ -2.28
snR8	snR8	HEL1	P36113	551 aa		0.83	□□□□□ -2.28
snR8	snR8	THI2	P38141	450 aa		0.83	□□□□□ -2.28
snR8	snR8	LYS1	P38998	373 aa	RIP-Chip data	0.83	□□□□□ -2.28	RIP-Chip
snR8	snR8	EGT2	P42835	1041 aa		0.83	□□□□□ -2.28
snR8	snR8	YDR387C	Q04162	555 aa		0.83	□□□□□ -2.28
snR8	snR8	SKM1	Q12469	655 aa		0.83	□□□□□ -2.28
snR8	snR8	YPR096C	O13587	100 aa		0.82	□□□□□ -2.28
snR8	snR8	PRD1	P25375	712 aa		0.82	□□□□□ -2.28
snR8	snR8	UTR5	P32630	166 aa		0.82	□□□□□ -2.28
snR8	snR8	YIL029C	P40538	142 aa		0.82	□□□□□ -2.28
snR8	snR8	DSL1	P53847	754 aa		0.82	□□□□□ -2.28
snR8	snR8	FIN1	Q03898	291 aa		0.82	□□□□□ -2.28
snR8	snR8	YPT6	Q99260	215 aa		0.82	□□□□□ -2.28
snR8	snR8	RPL31B	P0C2H9	113 aa	Known RBP	0.81	□□□□□ -2.28
snR8	snR8	RPL19A	P0CX82	189 aa	Known RBP	0.81	□□□□□ -2.28
snR8	snR8	RPL19B	P0CX83	189 aa	Predicted RBP	0.81	□□□□□ -2.28
snR8	snR8	ZRC1	P20107	442 aa		0.81	□□□□□ -2.28
snR8	snR8	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
snR8	snR8	SBE22	P38814	852 aa		0.81	□□□□□ -2.28
snR8	snR8	IGD1	P43598	195 aa		0.81	□□□□□ -2.28
snR8	snR8	BCH1	Q05029	724 aa		0.81	□□□□□ -2.28
snR8	snR8	YEH1	Q07804	573 aa		0.81	□□□□□ -2.28
snR8	snR8	SGT1	Q08446	395 aa		0.81	□□□□□ -2.28
snR8	snR8	YGK3	Q12222	375 aa	Predicted RBP	0.81	□□□□□ -2.28
snR8	snR8	ORT1	Q12375	292 aa		0.81	□□□□□ -2.28
snR8	snR8	RPS19A	P07280	144 aa	Known RBP	0.8	□□□□□ -2.28
snR8	snR8	RPS19B	P07281	144 aa	Predicted RBP	0.8	□□□□□ -2.28
snR8	snR8	GYP6	P32806	458 aa		0.8	□□□□□ -2.28
snR8	snR8	ANR2	P36090	516 aa	Predicted RBP	0.8	□□□□□ -2.28
snR8	snR8	YBL029W	P38201	376 aa		0.8	□□□□□ -2.28
snR8	snR8	CCT2	P39076	527 aa	Known RBP	0.8	□□□□□ -2.28
snR8	snR8	PTI1	P39927	425 aa	Predicted RBP	0.8	□□□□□ -2.28
snR8	snR8	KAP123	P40069	1113 aa	Known RBP	0.8	□□□□□ -2.28
snR8	snR8	YIR035C	P40579	254 aa		0.8	□□□□□ -2.28
snR8	snR8	YGL108C	P53139	140 aa		0.8	□□□□□ -2.28
snR8	snR8	MST27	P53176	234 aa		0.8	□□□□□ -2.28
snR8	snR8	KTR5	P53966	522 aa	Predicted RBP	0.8	□□□□□ -2.28
snR8	snR8	UBX4	P54730	416 aa		0.8	□□□□□ -2.28
snR8	snR8	GTR1	Q00582	310 aa		0.8	□□□□□ -2.28
snR8	snR8	IOC4	Q04213	475 aa		0.8	□□□□□ -2.28
snR8	snR8	RTN1	Q04947	295 aa	Known RBP	0.8	□□□□□ -2.28
snR8	snR8	TIR4	Q12218	487 aa	Predicted RBP	0.8	□□□□□ -2.28
snR8	snR8	HIS4	P00815	799 aa	Known RBP	0.79	□□□□□ -2.28
snR8	snR8	FUM1	P08417	488 aa	Known RBP	0.79	□□□□□ -2.28
snR8	snR8	SCH9	P11792	824 aa	Known RBP	0.79	□□□□□ -2.28
snR8	snR8	SKN1	P33336	771 aa		0.79	□□□□□ -2.28
snR8	snR8	PET130	P47065	347 aa		0.79	□□□□□ -2.28
snR8	snR8	HST4	P53688	370 aa		0.79	□□□□□ -2.28
snR8	snR8	NRM1	P53718	249 aa		0.79	□□□□□ -2.28
snR8	snR8	RPL21A	Q02753	160 aa	Known RBP	0.79	□□□□□ -2.28
snR8	snR8	RPL21B	Q12672	160 aa	Known RBP	0.79	□□□□□ -2.28
snR8	snR8	SAG1	P20840	650 aa		0.78	□□□□□ -2.28
snR8	snR8	AST1	P35183	429 aa		0.78	□□□□□ -2.28
snR8	snR8	DPH1	P40487	425 aa	Known RBP	0.78	□□□□□ -2.28
snR8	snR8	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
snR8	snR8	HSP31	Q04432	237 aa		0.78	□□□□□ -2.28
snR8	snR8	RMD5	Q12508	421 aa		0.78	□□□□□ -2.28
snR8	snR8	NAG1	Q8TGN9	163 aa		0.78	□□□□□ -2.28
snR8	snR8	WBP1	P33767	430 aa	Known RBP	0.77	□□□□□ -2.29
snR8	snR8	FHL1	P39521	936 aa		0.77	□□□□□ -2.29
snR8	snR8	TFG2	P41896	400 aa	Predicted RBP	0.77	□□□□□ -2.29
snR8	snR8	BET5	Q03630	159 aa		0.77	□□□□□ -2.29
snR8	snR8	SNU66	Q12420	587 aa	Predicted RBP	0.77	□□□□□ -2.29
snR8	snR8	YDL007C-A	Q2V2Q0	85 aa		0.77	□□□□□ -2.29
snR8	snR8	CHS3	P29465	1165 aa		0.76	□□□□□ -2.29
snR8	snR8	YPS1	P32329	569 aa		0.76	□□□□□ -2.29
snR8	snR8	PRP21	P32524	280 aa	Predicted RBP	0.76	□□□□□ -2.29
snR8	snR8	SAP185	P40856	1058 aa		0.76	□□□□□ -2.29
snR8	snR8	MRM2	P53123	320 aa		0.76	□□□□□ -2.29
snR8	snR8	YIF1	P53845	314 aa	Known RBP	0.76	□□□□□ -2.29
snR8	snR8	NGL3	Q03210	505 aa		0.76	□□□□□ -2.29
snR8	snR8	SYF1	Q04048	859 aa	Predicted RBP	0.76	□□□□□ -2.29
snR8	snR8	PFS1	P38872	237 aa		0.75	□□□□□ -2.29
snR8	snR8	SFH5	P47008	294 aa		0.75	□□□□□ -2.29
snR8	snR8	YJR030C	P47101	745 aa		0.75	□□□□□ -2.29
snR8	snR8	NBP1	P52919	319 aa	Predicted RBP	0.75	□□□□□ -2.29
snR8	snR8	YGR021W	P53212	290 aa		0.75	□□□□□ -2.29
snR8	snR8	SKI8	Q02793	397 aa	Predicted RBP	0.75	□□□□□ -2.29
snR8	snR8	MFG1	Q07684	458 aa		0.75	□□□□□ -2.29
snR8	snR8	AVL9	Q12500	764 aa		0.75	□□□□□ -2.29
snR8	snR8	YLR278C	Q05854	1341 aa		0.74	□□□□□ -2.29
snR8	snR8	GAL80	P04387	435 aa		0.74	□□□□□ -2.29
snR8	snR8	RHO2	P06781	192 aa		0.74	□□□□□ -2.29
snR8	snR8	DEP1	P31385	405 aa		0.74	□□□□□ -2.29
snR8	snR8	SRB2	P34162	210 aa		0.74	□□□□□ -2.29
snR8	snR8	SCC4	P40090	624 aa		0.74	□□□□□ -2.29
snR8	snR8	HMS2	P47175	358 aa		0.74	□□□□□ -2.29
snR8	snR8	COQ5	P49017	307 aa		0.74	□□□□□ -2.29
snR8	snR8	ZRG17	P53735	605 aa		0.74	□□□□□ -2.29
snR8	snR8	NOP58	Q12499	511 aa	Known RBP	0.74	□□□□□ -2.29
snR8	snR8	ILV5	P06168	395 aa	Known RBP	0.73	□□□□□ -2.29
snR8	snR8	PHA2	P32452	334 aa		0.73	□□□□□ -2.29
snR8	snR8	PCF11	P39081	626 aa	Predicted RBP	0.73	□□□□□ -2.29
snR8	snR8	COX14	P39103	70 aa		0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms