RNA–Protein interactions for RNA: YPR125W

YLH47, Transcript of Mitochondrial inner membrane protein, yeast

Gene YLH47, Length 1,365 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLH47	YPR125W	RPS10A	Q08745	105 aa	Predicted RBP	5.22	□□□□□ -1.57
YLH47	YPR125W	SEC3	P33332	1336 aa	Known RBP	5.22	□□□□□ -1.57
YLH47	YPR125W	NUP170	P38181	1502 aa		5.22	□□□□□ -1.57
YLH47	YPR125W	NFT1	P0CE68	1218 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	SAR1	P20606	190 aa	Known RBP	5.21	□□□□□ -1.58
YLH47	YPR125W	HXT2	P23585	541 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
YLH47	YPR125W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
YLH47	YPR125W	ANS1	P38832	159 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	ALP1	P38971	573 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	TOS3	P43637	560 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	TAX4	P47030	604 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	MRK1	P50873	501 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	PGA2	P53903	129 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	RSM23	Q01163	450 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	AAT1	Q01802	451 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	YDL057W	Q07379	328 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	PEX27	Q08580	376 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	AHC1	Q12433	566 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	SPO24	Q3E752	67 aa		5.21	□□□□□ -1.58
YLH47	YPR125W	SCEI	P03882	235 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	ADE4	P04046	510 aa	Known RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	MAS1	P10507	462 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	ARO4	P32449	370 aa	Known RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	YSC83	P32792	385 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	RPC34	P32910	317 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	YKR015C	P36111	568 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	GMH1	P36125	273 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	RRN10	P38204	145 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	QDR3	P38227	689 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	PIH1	P38768	344 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	SPC97	P38863	823 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	FMP52	P40008	231 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	YER085C	P40058	173 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	SHQ1	P40486	507 aa	Predicted RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	RPS10B	P46784	105 aa	Known RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	YJL163C	P46996	555 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	BUD4	P47136	1447 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	TRF5	P48561	642 aa	Known RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	SNZ1	Q03148	297 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	APC4	Q04601	652 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	RTN1	Q04947	295 aa	Known RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	COQ11	Q05892	277 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	ARO10	Q06408	635 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	MRPL35	Q06678	367 aa		5.2	□□□□□ -1.58
YLH47	YPR125W	DIB1	Q06819	143 aa	Predicted RBP	5.2	□□□□□ -1.58
YLH47	YPR125W	DNA2	P38859	1522 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	YOR1	P53049	1477 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	LAM4	P38800	1345 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	CDC21	P06785	304 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	PEP4	P07267	405 aa	Known RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	PEP5	P12868	1029 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	RNR3	P21672	869 aa	Known RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	HSP104	P31539	908 aa	Known RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	YPS1	P32329	569 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	RAD23	P32628	398 aa	Known RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	BUD2	P33314	1104 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	PCF11	P39081	626 aa	Predicted RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	BNA6	P43619	295 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	BIO3	P50277	480 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	APM1	Q00776	475 aa	Predicted RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	YMR178W	Q03219	274 aa	Known RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	MRPS17	Q03246	237 aa	Predicted RBP	5.19	□□□□□ -1.58
YLH47	YPR125W	PDR8	Q06149	701 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	THP1	Q08231	455 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	NRT1	Q08485	598 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	ZPS1	Q12512	249 aa		5.19	□□□□□ -1.58
YLH47	YPR125W	RPL24A	P04449	155 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	CDC36	P06100	191 aa	Predicted RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	ATP10	P18496	279 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	CNA1	P23287	553 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	ILV6	P25605	309 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	YUR1	P26725	428 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	FRE1	P32791	686 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	EMP70	P32802	667 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	SOR1	P35497	357 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	RRP4	P38792	359 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	YHR177W	P38867	453 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	PRP39	P39682	629 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	SRL4	Q03085	281 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	GPN3	Q06543	272 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	SOR2	Q07786	357 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	GEP3	Q08622	556 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	PKH2	Q12236	1081 aa	Known RBP	5.18	□□□□□ -1.58
YLH47	YPR125W	RTC1	Q08281	1341 aa		5.18	□□□□□ -1.58
YLH47	YPR125W	SEC63	P14906	663 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	RPI1	P23250	407 aa	Known RBP	5.17	□□□□□ -1.58
YLH47	YPR125W	ECT1	P33412	323 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	SHP1	P34223	423 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	MTR2	P34232	184 aa	Known RBP	5.17	□□□□□ -1.58
YLH47	YPR125W	PPS1	P38148	807 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	PAC11	P40960	533 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	TFG2	P41896	400 aa	Predicted RBP	5.17	□□□□□ -1.58
YLH47	YPR125W	YGR117C	P53270	476 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	YNL260C	P53846	198 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	KTR6	P54070	446 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	TAF12	Q03761	539 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	NSE1	Q07913	336 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	RDR1	Q08904	546 aa		5.17	□□□□□ -1.58
YLH47	YPR125W	NCE102	Q12207	173 aa	RIP-Chip data	5.17	□□□□□ -1.58	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms