RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W PIM1P36775 1133 aa1.6□□□□□ -2.15
YOP1YPR028W OST1P41543 476 aaKnown RBP1.6□□□□□ -2.15
YOP1YPR028W YFL067WP43537 175 aa1.6□□□□□ -2.15
YOP1YPR028W RPS0BP46654 252 aaKnown RBP1.6□□□□□ -2.15
YOP1YPR028W YJR011CP47086 261 aaPredicted RBP1.6□□□□□ -2.15
YOP1YPR028W PCP1P53259 346 aa1.6□□□□□ -2.15
YOP1YPR028W YGR250CP53316 781 aaKnown RBP1.6□□□□□ -2.15
YOP1YPR028W TOF1P53840 1238 aa1.6□□□□□ -2.15
YOP1YPR028W IBD2P53892 351 aa1.6□□□□□ -2.15
YOP1YPR028W MRP51Q02950 344 aa1.6□□□□□ -2.15
YOP1YPR028W YDR387CQ04162 555 aa1.6□□□□□ -2.15
YOP1YPR028W ROY1Q04847 553 aa1.6□□□□□ -2.15
YOP1YPR028W TSR1Q07381 788 aaKnown RBP1.6□□□□□ -2.15
YOP1YPR028W SGT1Q08446 395 aa1.6□□□□□ -2.15
YOP1YPR028W YPL199CQ08954 240 aa1.6□□□□□ -2.15
YOP1YPR028W VAM3Q12241 283 aa1.6□□□□□ -2.15
YOP1YPR028W YLR108CQ12259 485 aa1.6□□□□□ -2.15
YOP1YPR028W RBD2Q12270 262 aa1.6□□□□□ -2.15
YOP1YPR028W SAM1P10659 382 aaKnown RBP1.59□□□□□ -2.15
YOP1YPR028W SEC63P14906 663 aa1.59□□□□□ -2.15
YOP1YPR028W SAM2P19358 384 aaKnown RBP1.59□□□□□ -2.15
YOP1YPR028W SNT1P25357 1226 aa1.59□□□□□ -2.15
YOP1YPR028W RHB1P25378 209 aa1.59□□□□□ -2.15
YOP1YPR028W SPS22P25380 463 aa1.59□□□□□ -2.15
YOP1YPR028W RPC53P25441 422 aa1.59□□□□□ -2.15
YOP1YPR028W ADK2P26364 225 aa1.59□□□□□ -2.15
YOP1YPR028W BEM1P29366 551 aa1.59□□□□□ -2.15
YOP1YPR028W DBF4P32325 704 aa1.59□□□□□ -2.15
YOP1YPR028W HIR2P32480 875 aa1.59□□□□□ -2.15
YOP1YPR028W TFB1P32776 642 aa1.59□□□□□ -2.15
YOP1YPR028W STB6P36085 766 aa1.59□□□□□ -2.15
YOP1YPR028W MMS4P38257 691 aa1.59□□□□□ -2.15
YOP1YPR028W YBR137WP38276 179 aa1.59□□□□□ -2.15
YOP1YPR028W RFC3P38629 340 aa1.59□□□□□ -2.15
YOP1YPR028W LYS1P38998 373 aaRIP-Chip data1.59□□□□□ -2.15not detected
YOP1YPR028W MST28P39552 234 aa1.59□□□□□ -2.15
YOP1YPR028W SAS2P40963 338 aa1.59□□□□□ -2.15
YOP1YPR028W SHY1P53266 389 aa1.59□□□□□ -2.15
YOP1YPR028W HXT11P54862 567 aa1.59□□□□□ -2.15
YOP1YPR028W REX4Q08237 289 aa1.59□□□□□ -2.15
YOP1YPR028W TIM18Q08749 192 aa1.59□□□□□ -2.15
YOP1YPR028W RKM1Q08961 583 aaPredicted RBP1.59□□□□□ -2.15
YOP1YPR028W MED2Q12124 431 aa1.59□□□□□ -2.15
YOP1YPR028W AFI1Q99222 893 aa1.59□□□□□ -2.15
YOP1YPR028W TEF1P02994 458 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W SCEIP03882 235 aa1.58□□□□□ -2.16
YOP1YPR028W ARG4P04076 463 aaPredicted RBP1.58□□□□□ -2.16
YOP1YPR028W RPS8AP0CX39 200 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W RPS8BP0CX40 200 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W CLB1P24868 471 aa1.58□□□□□ -2.16
YOP1YPR028W TIP1P27654 210 aaPredicted RBP1.58□□□□□ -2.16
YOP1YPR028W URA7P28274 579 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W BRF1P29056 596 aa1.58□□□□□ -2.16
YOP1YPR028W MPE1P35728 441 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W UTH1P36135 365 aa1.58□□□□□ -2.16
YOP1YPR028W RIB5P38145 238 aa1.58□□□□□ -2.16
YOP1YPR028W PRM5P40476 318 aa1.58□□□□□ -2.16
YOP1YPR028W LAM5P43560 674 aa1.58□□□□□ -2.16
YOP1YPR028W CAK1P43568 368 aaPredicted RBP1.58□□□□□ -2.16
YOP1YPR028W HMS2P47175 358 aa1.58□□□□□ -2.16
YOP1YPR028W MTM1P53320 366 aa1.58□□□□□ -2.16
YOP1YPR028W YNR048WP53740 393 aa1.58□□□□□ -2.16
YOP1YPR028W FRE4P53746 719 aa1.58□□□□□ -2.16
YOP1YPR028W MDG1P53885 366 aa1.58□□□□□ -2.16
YOP1YPR028W BNI5P53890 448 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W HOT1Q03213 719 aa1.58□□□□□ -2.16
YOP1YPR028W YMR181CQ03231 154 aa1.58□□□□□ -2.16
YOP1YPR028W RMT2Q03305 412 aa1.58□□□□□ -2.16
YOP1YPR028W YDR131CQ03899 556 aa1.58□□□□□ -2.16
YOP1YPR028W YMR130WQ04223 302 aa1.58□□□□□ -2.16
YOP1YPR028W YMR027WQ04371 470 aa1.58□□□□□ -2.16
YOP1YPR028W ERB1Q04660 807 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W MDM30Q05930 598 aa1.58□□□□□ -2.16
YOP1YPR028W DIS3Q08162 1001 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W YPR022CQ12139 1133 aa1.58□□□□□ -2.16
YOP1YPR028W PKH2Q12236 1081 aaKnown RBP1.58□□□□□ -2.16
YOP1YPR028W ISA2Q12425 185 aa1.58□□□□□ -2.16
YOP1YPR028W ISN1Q99312 450 aa1.58□□□□□ -2.16
YOP1YPR028W RAD61Q99359 647 aa1.58□□□□□ -2.16
YOP1YPR028W SPO7P18410 259 aa1.57□□□□□ -2.16
YOP1YPR028W URA4P20051 364 aa1.57□□□□□ -2.16
YOP1YPR028W GEX1P25596 615 aa1.57□□□□□ -2.16
YOP1YPR028W SMY1P32364 656 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W SOR1P35497 357 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W APE3P37302 537 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W MSG5P38590 489 aa1.57□□□□□ -2.16
YOP1YPR028W PAN6P40459 309 aa1.57□□□□□ -2.16
YOP1YPR028W WWM1P43582 211 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W RPT4P53549 437 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W HAL1Q01766 294 aa1.57□□□□□ -2.16
YOP1YPR028W RSN1Q03516 953 aa1.57□□□□□ -2.16
YOP1YPR028W BET5Q03630 159 aa1.57□□□□□ -2.16
YOP1YPR028W TAF12Q03761 539 aa1.57□□□□□ -2.16
YOP1YPR028W ACL4Q03771 387 aa1.57□□□□□ -2.16
YOP1YPR028W HRI1Q05905 244 aaKnown RBP1.57□□□□□ -2.16
YOP1YPR028W DCS1Q06151 350 aa1.57□□□□□ -2.16
YOP1YPR028W SOR2Q07786 357 aa1.57□□□□□ -2.16
YOP1YPR028W SKI7Q08491 747 aaPredicted RBP1.57□□□□□ -2.16
YOP1YPR028W FDH1Q08911 376 aa1.57□□□□□ -2.16
YOP1YPR028W BUG1Q12191 341 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms