RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W SSY1Q03770 852 aa5.74□□□□□ -1.49
VPS5YOR069W TRM82Q03774 444 aa5.74□□□□□ -1.49
VPS5YOR069W YDR514CQ04408 483 aa5.74□□□□□ -1.49
VPS5YOR069W ASR1Q06834 288 aa5.74□□□□□ -1.49
VPS5YOR069W TIF6Q12522 245 aaKnown RBP5.74□□□□□ -1.49
VPS5YOR069W GCN4P03069 281 aa5.73□□□□□ -1.49
VPS5YOR069W SPS2P08459 502 aa5.73□□□□□ -1.49
VPS5YOR069W YDJ1P25491 409 aaKnown RBP5.73□□□□□ -1.49
VPS5YOR069W SNC1P31109 117 aa5.73□□□□□ -1.49
VPS5YOR069W GUT2P32191 649 aa5.73□□□□□ -1.49
VPS5YOR069W AAR2P32357 355 aaPredicted RBP5.73□□□□□ -1.49
VPS5YOR069W CBT1P36038 271 aaPredicted RBP5.73□□□□□ -1.49
VPS5YOR069W RSM22P36056 628 aa5.73□□□□□ -1.49
VPS5YOR069W TSL1P38427 1098 aaKnown RBP5.73□□□□□ -1.49
VPS5YOR069W STB5P38699 743 aa5.73□□□□□ -1.49
VPS5YOR069W DHH1P39517 506 aaKnown RBP5.73□□□□□ -1.49
VPS5YOR069W GTT3P39996 337 aa5.73□□□□□ -1.49
VPS5YOR069W RMD8P43620 662 aa5.73□□□□□ -1.49
VPS5YOR069W POP6P53218 158 aa5.73□□□□□ -1.49
VPS5YOR069W NUP100Q02629 959 aa5.73□□□□□ -1.49
VPS5YOR069W NUP116Q02630 1113 aa5.73□□□□□ -1.49
VPS5YOR069W YPL062WQ02781 134 aa5.73□□□□□ -1.49
VPS5YOR069W ARV1Q06541 321 aa5.73□□□□□ -1.49
VPS5YOR069W YPR172WQ06608 200 aa5.73□□□□□ -1.49
VPS5YOR069W DDC1Q08949 612 aa5.73□□□□□ -1.49
VPS5YOR069W UPC2Q12151 913 aa5.73□□□□□ -1.49
VPS5YOR069W SIA1Q12212 622 aa5.73□□□□□ -1.49
VPS5YOR069W LCB4Q12246 624 aa5.73□□□□□ -1.49
VPS5YOR069W YGL194C-AQ2V2P6 80 aa5.73□□□□□ -1.49
VPS5YOR069W MTR10Q99189 972 aa5.73□□□□□ -1.49
VPS5YOR069W HIS1P00498 297 aaKnown RBP5.72□□□□□ -1.49
VPS5YOR069W AI4P03878 556 aa5.72□□□□□ -1.49
VPS5YOR069W PET54P10834 293 aa5.72□□□□□ -1.49
VPS5YOR069W YCK1P23291 538 aa5.72□□□□□ -1.49
VPS5YOR069W PET309P32522 965 aaPredicted RBP5.72□□□□□ -1.49
VPS5YOR069W PDR3P33200 976 aa5.72□□□□□ -1.49
VPS5YOR069W SDS22P36047 338 aa5.72□□□□□ -1.49
VPS5YOR069W RCK1P38622 512 aa5.72□□□□□ -1.49
VPS5YOR069W GIC1P38785 314 aa5.72□□□□□ -1.49
VPS5YOR069W SBE22P38814 852 aa5.72□□□□□ -1.49
VPS5YOR069W QDR1P40475 563 aa5.72□□□□□ -1.49
VPS5YOR069W ATG18P43601 500 aa5.72□□□□□ -1.49
VPS5YOR069W NBP35P52920 328 aa5.72□□□□□ -1.49
VPS5YOR069W BRE5P53741 515 aaKnown RBP5.72□□□□□ -1.49
VPS5YOR069W FYV6P53913 173 aa5.72□□□□□ -1.49
VPS5YOR069W ICT1Q12385 394 aa5.72□□□□□ -1.49
VPS5YOR069W YDR461C-AQ2V2P7 80 aa5.72□□□□□ -1.49
VPS5YOR069W AFI1Q99222 893 aa5.72□□□□□ -1.49
VPS5YOR069W SPT3P06844 337 aa5.72□□□□□ -1.49
VPS5YOR069W MOD5P07884 428 aa5.72□□□□□ -1.49
VPS5YOR069W MSM1P22438 575 aa5.72□□□□□ -1.49
VPS5YOR069W PUP1P25043 261 aa5.72□□□□□ -1.49
VPS5YOR069W HCM1P25364 564 aa5.72□□□□□ -1.49
VPS5YOR069W YIH1P25637 258 aa5.72□□□□□ -1.49
VPS5YOR069W GAC1P28006 793 aa5.72□□□□□ -1.49
VPS5YOR069W DHR2P36009 735 aaPredicted RBP5.72□□□□□ -1.49
VPS5YOR069W VPS29P38759 282 aa5.72□□□□□ -1.49
VPS5YOR069W RRF1P38771 230 aa5.72□□□□□ -1.49
VPS5YOR069W NVJ1P38881 321 aa5.72□□□□□ -1.49
VPS5YOR069W SSO2P39926 295 aa5.72□□□□□ -1.49
VPS5YOR069W HPA3P39979 161 aa5.72□□□□□ -1.49
VPS5YOR069W FMP52P40008 231 aa5.72□□□□□ -1.49
VPS5YOR069W RRG9P40156 214 aa5.72□□□□□ -1.49
VPS5YOR069W TED1P40533 473 aa5.72□□□□□ -1.49
VPS5YOR069W CAF16P43569 289 aa5.72□□□□□ -1.49
VPS5YOR069W YAE1P47118 141 aaPredicted RBP5.72□□□□□ -1.49
VPS5YOR069W SLI1P53304 468 aa5.72□□□□□ -1.49
VPS5YOR069W RRN9P53437 365 aa5.72□□□□□ -1.49
VPS5YOR069W IDP3P53982 420 aaKnown RBP5.72□□□□□ -1.49
VPS5YOR069W FDC1Q03034 503 aa5.72□□□□□ -1.49
VPS5YOR069W PRM15Q03262 622 aa5.72□□□□□ -1.49
VPS5YOR069W MSC2Q03455 724 aa5.72□□□□□ -1.49
VPS5YOR069W VHS1Q03785 461 aa5.72□□□□□ -1.49
VPS5YOR069W YMR321CQ04898 105 aa5.72□□□□□ -1.49
VPS5YOR069W FRE3Q08905 711 aa5.72□□□□□ -1.49
VPS5YOR069W YOR012WQ12351 137 aa5.72□□□□□ -1.49
VPS5YOR069W RPS9BP05755 195 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W MET2P08465 486 aa5.71□□□□□ -1.5
VPS5YOR069W RPP1BP10622 106 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W SIR1P21691 654 aa5.71□□□□□ -1.5
VPS5YOR069W NDC1P32500 655 aa5.71□□□□□ -1.5
VPS5YOR069W CAT2P32796 670 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W LIP5P32875 414 aa5.71□□□□□ -1.5
VPS5YOR069W MSN2P33748 704 aa5.71□□□□□ -1.5
VPS5YOR069W MAK5P38112 773 aaPredicted RBP5.71□□□□□ -1.5
VPS5YOR069W OSH7P38755 437 aa5.71□□□□□ -1.5
VPS5YOR069W MDM31P38880 579 aa5.71□□□□□ -1.5
VPS5YOR069W MSS4P38994 779 aa5.71□□□□□ -1.5
VPS5YOR069W EDC3P39998 551 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W BUR6P40096 142 aa5.71□□□□□ -1.5
VPS5YOR069W YFL052WP43551 465 aa5.71□□□□□ -1.5
VPS5YOR069W PYK2P52489 506 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W STR3P53101 465 aaKnown RBP5.71□□□□□ -1.5
VPS5YOR069W SHY1P53266 389 aa5.71□□□□□ -1.5
VPS5YOR069W GRX8Q05926 109 aa5.71□□□□□ -1.5
VPS5YOR069W APC5Q08683 685 aa5.71□□□□□ -1.5
VPS5YOR069W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
VPS5YOR069W ARP7Q12406 477 aa5.71□□□□□ -1.5
VPS5YOR069W YOR131CQ12486 218 aa5.71□□□□□ -1.5
VPS5YOR069W HTA1P04911 132 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms