RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YJL070CP40361 888 aa3.38□□□□□ -1.87
YSF3YNL138W-A FIS1P40515 155 aa3.38□□□□□ -1.87
YSF3YNL138W-A ERG10P41338 398 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A VTC2P43585 828 aa3.38□□□□□ -1.87
YSF3YNL138W-A ARE2P53629 642 aaKnown RBP3.38□□□□□ -1.87
YSF3YNL138W-A VPS75P53853 264 aa3.38□□□□□ -1.87
YSF3YNL138W-A AIM33Q04516 312 aa3.38□□□□□ -1.87
YSF3YNL138W-A CDC45Q08032 650 aa3.38□□□□□ -1.87
YSF3YNL138W-A THI20Q08224 551 aa3.38□□□□□ -1.87
YSF3YNL138W-A RLM1Q12224 676 aa3.38□□□□□ -1.87
YSF3YNL138W-A HRT3Q12347 344 aa3.38□□□□□ -1.87
YSF3YNL138W-A YJR112W-AQ3E743 109 aa3.38□□□□□ -1.87
YSF3YNL138W-A GAL80P04387 435 aa3.37□□□□□ -1.87
YSF3YNL138W-A PEP4P07267 405 aaKnown RBP3.37□□□□□ -1.87
YSF3YNL138W-A RPL1AP0CX43 217 aaKnown RBP3.37□□□□□ -1.87
YSF3YNL138W-A RPL1BP0CX44 217 aaKnown RBP3.37□□□□□ -1.87
YSF3YNL138W-A MRS3P10566 314 aa3.37□□□□□ -1.87
YSF3YNL138W-A REV1P12689 985 aa3.37□□□□□ -1.87
YSF3YNL138W-A PEP5P12868 1029 aa3.37□□□□□ -1.87
YSF3YNL138W-A CLN3P13365 580 aa3.37□□□□□ -1.87
YSF3YNL138W-A SEC62P21825 274 aa3.37□□□□□ -1.87
YSF3YNL138W-A DPH2P32461 534 aa3.37□□□□□ -1.87
YSF3YNL138W-A ECM15P35195 104 aa3.37□□□□□ -1.87
YSF3YNL138W-A YBR056WP38081 501 aa3.37□□□□□ -1.87
YSF3YNL138W-A VID24P38263 362 aa3.37□□□□□ -1.87
YSF3YNL138W-A RRP3P38712 501 aaKnown RBP3.37□□□□□ -1.87
YSF3YNL138W-A PFS1P38872 237 aa3.37□□□□□ -1.87
YSF3YNL138W-A TIF34P40217 347 aaKnown RBP3.37□□□□□ -1.87
YSF3YNL138W-A YNL146WP53906 100 aa3.37□□□□□ -1.87
YSF3YNL138W-A GLO2Q05584 274 aa3.37□□□□□ -1.87
YSF3YNL138W-A HSH49Q99181 213 aaPredicted RBP3.37□□□□□ -1.87
YSF3YNL138W-A IPP1P00817 287 aaKnown RBP3.36□□□□□ -1.87
YSF3YNL138W-A ILV1P00927 576 aaKnown RBP3.36□□□□□ -1.87
YSF3YNL138W-A MSF1P08425 469 aa3.36□□□□□ -1.87
YSF3YNL138W-A YML002WP0CF17 737 aa3.36□□□□□ -1.87
YSF3YNL138W-A RPL4AP10664 362 aaKnown RBP3.36□□□□□ -1.87
YSF3YNL138W-A PMS1P14242 873 aa3.36□□□□□ -1.87
YSF3YNL138W-A VPS17P32913 551 aa3.36□□□□□ -1.87
YSF3YNL138W-A OSW5P40219 148 aa3.36□□□□□ -1.87
YSF3YNL138W-A BTT1P40314 149 aaPredicted RBP3.36□□□□□ -1.87
YSF3YNL138W-A DIM1P41819 318 aaKnown RBP3.36□□□□□ -1.87
YSF3YNL138W-A IKS1P47042 667 aa3.36□□□□□ -1.87
YSF3YNL138W-A RPL4BP49626 362 aaKnown RBP3.36□□□□□ -1.87
YSF3YNL138W-A TIM10P87108 93 aa3.36□□□□□ -1.87
YSF3YNL138W-A VPS38Q05919 439 aa3.36□□□□□ -1.87
YSF3YNL138W-A YEH2Q07950 538 aa3.36□□□□□ -1.87
YSF3YNL138W-A IES4Q08561 116 aa3.36□□□□□ -1.87
YSF3YNL138W-A YOR365CQ08844 703 aa3.36□□□□□ -1.87
YSF3YNL138W-A MED1Q12321 566 aa3.36□□□□□ -1.87
YSF3YNL138W-A YMR230W-AQ3E7B5 62 aa3.36□□□□□ -1.87
YSF3YNL138W-A SEC16P48415 2195 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A GCN4P03069 281 aa3.35□□□□□ -1.87
YSF3YNL138W-A RAD52P06778 471 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A DAL82P21705 255 aa3.35□□□□□ -1.87
YSF3YNL138W-A ATS1P31386 333 aa3.35□□□□□ -1.87
YSF3YNL138W-A SKG6P32900 734 aaPredicted RBP3.35□□□□□ -1.87
YSF3YNL138W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YSF3YNL138W-A MPE1P35728 441 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A PCA1P38360 1216 aa3.35□□□□□ -1.87
YSF3YNL138W-A MSR1P38714 643 aa3.35□□□□□ -1.87
YSF3YNL138W-A YHR210CP38893 341 aa3.35□□□□□ -1.87
YSF3YNL138W-A GAA1P39012 614 aa3.35□□□□□ -1.87
YSF3YNL138W-A ERP2P39704 215 aa3.35□□□□□ -1.87
YSF3YNL138W-A VPS52P39904 641 aa3.35□□□□□ -1.87
YSF3YNL138W-A FYV8P46949 817 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A AIM22P47051 409 aa3.35□□□□□ -1.87
YSF3YNL138W-A CRZ1P53968 678 aa3.35□□□□□ -1.87
YSF3YNL138W-A CWC21Q03375 135 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A YDR341CQ05506 607 aaKnown RBP3.35□□□□□ -1.87
YSF3YNL138W-A RKM5Q12367 367 aa3.35□□□□□ -1.87
YSF3YNL138W-A RAD3P06839 778 aa3.34□□□□□ -1.87
YSF3YNL138W-A PRR1P28708 518 aa3.34□□□□□ -1.87
YSF3YNL138W-A SIP2P34164 415 aaKnown RBP3.34□□□□□ -1.87
YSF3YNL138W-A YEL057CP39983 233 aa3.34□□□□□ -1.87
YSF3YNL138W-A SCD6P45978 349 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
YSF3YNL138W-A YGR066CP53242 292 aa3.34□□□□□ -1.87
YSF3YNL138W-A CAF130P53280 1122 aaPredicted RBP3.34□□□□□ -1.87
YSF3YNL138W-A RTT102P53330 157 aa3.34□□□□□ -1.87
YSF3YNL138W-A SUR7P54003 302 aa3.34□□□□□ -1.87
YSF3YNL138W-A TOF2Q02208 771 aa3.34□□□□□ -1.87
YSF3YNL138W-A ECM7Q06200 448 aa3.34□□□□□ -1.87
YSF3YNL138W-A THP1Q08231 455 aa3.34□□□□□ -1.87
YSF3YNL138W-A AVL9Q12500 764 aa3.34□□□□□ -1.87
YSF3YNL138W-A CTF3Q12748 733 aa3.34□□□□□ -1.87
YSF3YNL138W-A BRF1P29056 596 aa3.33□□□□□ -1.88
YSF3YNL138W-A YME1P32795 747 aa3.33□□□□□ -1.88
YSF3YNL138W-A YNK1P36010 153 aaKnown RBP3.33□□□□□ -1.88
YSF3YNL138W-A SPO22P40511 975 aa3.33□□□□□ -1.88
YSF3YNL138W-A PET130P47065 347 aa3.33□□□□□ -1.88
YSF3YNL138W-A YJR154WP47181 346 aa3.33□□□□□ -1.88
YSF3YNL138W-A VEL1P53058 206 aa3.33□□□□□ -1.88
YSF3YNL138W-A RBG2P53295 368 aaKnown RBP3.33□□□□□ -1.88
YSF3YNL138W-A RLI1Q03195 608 aaKnown RBP3.33□□□□□ -1.88
YSF3YNL138W-A YTH1Q06102 208 aaPredicted RBP3.33□□□□□ -1.88
YSF3YNL138W-A SMD2Q06217 110 aaKnown RBP3.33□□□□□ -1.88
YSF3YNL138W-A CDD1Q06549 142 aa3.33□□□□□ -1.88
YSF3YNL138W-A FOB1O13329 566 aa3.32□□□□□ -1.88
YSF3YNL138W-A SUC2P00724 532 aa3.32□□□□□ -1.88
YSF3YNL138W-A ARG3P05150 338 aa3.32□□□□□ -1.88
YSF3YNL138W-A RPL15AP05748 204 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms