RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C BLI1P35727 113 aa3.12□□□□□ -1.91
YMR046CYMR046C APE3P37302 537 aaKnown RBP3.12□□□□□ -1.91
YMR046CYMR046C ISC1P40015 477 aaKnown RBP3.12□□□□□ -1.91
YMR046CYMR046C TFG2P41896 400 aaPredicted RBP3.12□□□□□ -1.91
YMR046CYMR046C BUD27P43573 796 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YMR046CYMR046C ART5P53244 586 aaKnown RBP3.12□□□□□ -1.91
YMR046CYMR046C DOP1Q03921 1698 aa3.11□□□□□ -1.91
YMR046CYMR046C RIP1P08067 215 aa3.11□□□□□ -1.91
YMR046CYMR046C ARO1P08566 1588 aaKnown RBP3.11□□□□□ -1.91
YMR046CYMR046C CDC60P26637 1090 aaKnown RBP3.11□□□□□ -1.91
YMR046CYMR046C AGA1P32323 725 aa3.11□□□□□ -1.91
YMR046CYMR046C REC114P32841 428 aa3.11□□□□□ -1.91
YMR046CYMR046C NIP100P33420 868 aa3.11□□□□□ -1.91
YMR046CYMR046C ARA1P38115 344 aa3.11□□□□□ -1.91
YMR046CYMR046C VHC1P38329 1120 aa3.11□□□□□ -1.91
YMR046CYMR046C RRT2P38332 387 aa3.11□□□□□ -1.91
YMR046CYMR046C YAP3P38749 330 aa3.11□□□□□ -1.91
YMR046CYMR046C KRE9P39005 276 aa3.11□□□□□ -1.91
YMR046CYMR046C NCS2P53923 493 aaPredicted RBP3.11□□□□□ -1.91
YMR046CYMR046C RCF1Q03713 159 aa3.11□□□□□ -1.91
YMR046CYMR046C YTH1Q06102 208 aaPredicted RBP3.11□□□□□ -1.91
YMR046CYMR046C HSP42Q12329 375 aa3.11□□□□□ -1.91
YMR046CYMR046C CTF3Q12748 733 aa3.11□□□□□ -1.91
YMR046CYMR046C PRP16P15938 1071 aaPredicted RBP3.1□□□□□ -1.91
YMR046CYMR046C PUT3P25502 979 aaPredicted RBP3.1□□□□□ -1.91
YMR046CYMR046C KRE2P27809 442 aa3.1□□□□□ -1.91
YMR046CYMR046C NDI1P32340 513 aa3.1□□□□□ -1.91
YMR046CYMR046C PRP21P32524 280 aaPredicted RBP3.1□□□□□ -1.91
YMR046CYMR046C SLM4P38247 162 aa3.1□□□□□ -1.91
YMR046CYMR046C CCT2P39076 527 aaKnown RBP3.1□□□□□ -1.91
YMR046CYMR046C CCT4P39078 528 aaKnown RBP3.1□□□□□ -1.91
YMR046CYMR046C AVT4P50944 713 aa3.1□□□□□ -1.91
YMR046CYMR046C WSC2P53832 503 aa3.1□□□□□ -1.91
YMR046CYMR046C ARK1P53974 638 aa3.1□□□□□ -1.91
YMR046CYMR046C PIR3Q03180 325 aa3.1□□□□□ -1.91
YMR046CYMR046C HOT1Q03213 719 aa3.1□□□□□ -1.91
YMR046CYMR046C RTT103Q05543 409 aa3.1□□□□□ -1.91
YMR046CYMR046C VAM3Q12241 283 aa3.1□□□□□ -1.91
YMR046CYMR046C YLR278CQ05854 1341 aa3.09□□□□□ -1.91
YMR046CYMR046C YBT1P32386 1661 aa3.09□□□□□ -1.91
YMR046CYMR046C YSP2Q06681 1438 aa3.09□□□□□ -1.91
YMR046CYMR046C TY3B-GQ99315 1547 aa3.09□□□□□ -1.91
YMR046CYMR046C HIP1P06775 603 aa3.09□□□□□ -1.91
YMR046CYMR046C YAR066WP0CX18 203 aa3.09□□□□□ -1.91
YMR046CYMR046C YHR214WP0CX19 203 aa3.09□□□□□ -1.91
YMR046CYMR046C SRV2P17555 526 aaKnown RBP3.09□□□□□ -1.91
YMR046CYMR046C GEX1P25596 615 aa3.09□□□□□ -1.91
YMR046CYMR046C YCR100CP25606 316 aa3.09□□□□□ -1.91
YMR046CYMR046C SIN4P32259 974 aa3.09□□□□□ -1.91
YMR046CYMR046C HIR2P32480 875 aa3.09□□□□□ -1.91
YMR046CYMR046C JEM1P40358 645 aa3.09□□□□□ -1.91
YMR046CYMR046C GCD10P41814 478 aa3.09□□□□□ -1.91
YMR046CYMR046C PCP1P53259 346 aa3.09□□□□□ -1.91
YMR046CYMR046C RPT4P53549 437 aaKnown RBP3.09□□□□□ -1.91
YMR046CYMR046C YIF1P53845 314 aaKnown RBP3.09□□□□□ -1.91
YMR046CYMR046C DSL1P53847 754 aa3.09□□□□□ -1.91
YMR046CYMR046C PNG1Q02890 363 aa3.09□□□□□ -1.91
YMR046CYMR046C ACL4Q03771 387 aa3.09□□□□□ -1.91
YMR046CYMR046C YDR387CQ04162 555 aa3.09□□□□□ -1.91
YMR046CYMR046C HSP31Q04432 237 aa3.09□□□□□ -1.91
YMR046CYMR046C MED2Q12124 431 aa3.09□□□□□ -1.91
YMR046CYMR046C BNI1P41832 1953 aa3.08□□□□□ -1.92
YMR046CYMR046C SEC63P14906 663 aa3.08□□□□□ -1.92
YMR046CYMR046C URA4P20051 364 aa3.08□□□□□ -1.92
YMR046CYMR046C BRF1P29056 596 aa3.08□□□□□ -1.92
YMR046CYMR046C GLC7P32598 312 aaKnown RBP3.08□□□□□ -1.92
YMR046CYMR046C LTV1P34078 463 aa3.08□□□□□ -1.92
YMR046CYMR046C YCR041WP37265 110 aa3.08□□□□□ -1.92
YMR046CYMR046C RFC3P38629 340 aa3.08□□□□□ -1.92
YMR046CYMR046C RPS0BP46654 252 aaKnown RBP3.08□□□□□ -1.92
YMR046CYMR046C TRS85P46944 698 aa3.08□□□□□ -1.92
YMR046CYMR046C TOM22P49334 152 aa3.08□□□□□ -1.92
YMR046CYMR046C POP6P53218 158 aa3.08□□□□□ -1.92
YMR046CYMR046C GIS2P53849 153 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
YMR046CYMR046C OAZ1Q02803 292 aa3.08□□□□□ -1.92
YMR046CYMR046C YMR130WQ04223 302 aa3.08□□□□□ -1.92
YMR046CYMR046C MMR1Q06324 491 aa3.08□□□□□ -1.92
YMR046CYMR046C RKM1Q08961 583 aaPredicted RBP3.08□□□□□ -1.92
YMR046CYMR046C SEC7P11075 2009 aaKnown RBP3.08□□□□□ -1.92
YMR046CYMR046C LPD1P09624 499 aaKnown RBP3.07□□□□□ -1.92
YMR046CYMR046C CLN1P20437 546 aa3.07□□□□□ -1.92
YMR046CYMR046C APE2P32454 952 aaKnown RBP3.07□□□□□ -1.92
YMR046CYMR046C SWI3P32591 825 aa3.07□□□□□ -1.92
YMR046CYMR046C MMS4P38257 691 aa3.07□□□□□ -1.92
YMR046CYMR046C YHR218WP38899 603 aa3.07□□□□□ -1.92
YMR046CYMR046C SAS2P40963 338 aa3.07□□□□□ -1.92
YMR046CYMR046C YIP1P53039 248 aa3.07□□□□□ -1.92
YMR046CYMR046C YGR111WP53265 400 aa3.07□□□□□ -1.92
YMR046CYMR046C CAF40P53829 373 aa3.07□□□□□ -1.92
YMR046CYMR046C MDG1P53885 366 aa3.07□□□□□ -1.92
YMR046CYMR046C ODC1Q03028 310 aa3.07□□□□□ -1.92
YMR046CYMR046C ERO1Q03103 563 aa3.07□□□□□ -1.92
YMR046CYMR046C MDM30Q05930 598 aa3.07□□□□□ -1.92
YMR046CYMR046C GPM3Q12326 303 aa3.07□□□□□ -1.92
YMR046CYMR046C PAR32Q12515 295 aaKnown RBP3.07□□□□□ -1.92
YMR046CYMR046C CHC1P22137 1653 aaKnown RBP3.06□□□□□ -1.92
YMR046CYMR046C CPR1P14832 162 aaKnown RBP3.06□□□□□ -1.92
YMR046CYMR046C SPO7P18410 259 aa3.06□□□□□ -1.92
YMR046CYMR046C RPI1P23250 407 aaKnown RBP3.06□□□□□ -1.92
YMR046CYMR046C MNE1P24720 663 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms