RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W HSP42Q12329 375 aa2.07□□□□□ -2.08
SEC22YLR268W AFI1Q99222 893 aa2.07□□□□□ -2.08
SEC22YLR268W HIS4P00815 799 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W CHS1P08004 1131 aa2.06□□□□□ -2.08
SEC22YLR268W SRV2P17555 526 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W RPI1P23250 407 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W SNT1P25357 1226 aa2.06□□□□□ -2.08
SEC22YLR268W SPS22P25380 463 aa2.06□□□□□ -2.08
SEC22YLR268W YCR100CP25606 316 aa2.06□□□□□ -2.08
SEC22YLR268W ADK2P26364 225 aa2.06□□□□□ -2.08
SEC22YLR268W APE2P32454 952 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W PRP21P32524 280 aaPredicted RBP2.06□□□□□ -2.08
SEC22YLR268W YCR041WP37265 110 aa2.06□□□□□ -2.08
SEC22YLR268W YHR054CP38780 354 aa2.06□□□□□ -2.08
SEC22YLR268W CCT2P39076 527 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W GCD10P41814 478 aa2.06□□□□□ -2.08
SEC22YLR268W COS5P47187 383 aa2.06□□□□□ -2.08
SEC22YLR268W PCP1P53259 346 aa2.06□□□□□ -2.08
SEC22YLR268W BNI5P53890 448 aaKnown RBP2.06□□□□□ -2.08
SEC22YLR268W PNG1Q02890 363 aa2.06□□□□□ -2.08
SEC22YLR268W COS7Q07788 383 aa2.06□□□□□ -2.08
SEC22YLR268W MUM3Q08750 479 aa2.06□□□□□ -2.08
SEC22YLR268W VAM3Q12241 283 aa2.06□□□□□ -2.08
SEC22YLR268W ISN1Q99312 450 aa2.06□□□□□ -2.08
SEC22YLR268W CLB1P24868 471 aa2.05□□□□□ -2.08
SEC22YLR268W KRE2P27809 442 aa2.05□□□□□ -2.08
SEC22YLR268W BEM1P29366 551 aa2.05□□□□□ -2.08
SEC22YLR268W SIN4P32259 974 aa2.05□□□□□ -2.08
SEC22YLR268W HIR2P32480 875 aa2.05□□□□□ -2.08
SEC22YLR268W ECM25P32525 599 aa2.05□□□□□ -2.08
SEC22YLR268W TFB1P32776 642 aa2.05□□□□□ -2.08
SEC22YLR268W PAN6P40459 309 aa2.05□□□□□ -2.08
SEC22YLR268W SAS2P40963 338 aa2.05□□□□□ -2.08
SEC22YLR268W RPS0BP46654 252 aaKnown RBP2.05□□□□□ -2.08
SEC22YLR268W TRS85P46944 698 aa2.05□□□□□ -2.08
SEC22YLR268W ECM27P47144 725 aa2.05□□□□□ -2.08
SEC22YLR268W YIP1P53039 248 aa2.05□□□□□ -2.08
SEC22YLR268W YIF1P53845 314 aaKnown RBP2.05□□□□□ -2.08
SEC22YLR268W SKO1Q02100 647 aa2.05□□□□□ -2.08
SEC22YLR268W MRP51Q02950 344 aa2.05□□□□□ -2.08
SEC22YLR268W ODC1Q03028 310 aa2.05□□□□□ -2.08
SEC22YLR268W HER2Q03557 464 aa2.05□□□□□ -2.08
SEC22YLR268W YDR131CQ03899 556 aa2.05□□□□□ -2.08
SEC22YLR268W YDR387CQ04162 555 aa2.05□□□□□ -2.08
SEC22YLR268W ISA2Q12425 185 aa2.05□□□□□ -2.08
SEC22YLR268W URA4P20051 364 aa2.04□□□□□ -2.08
SEC22YLR268W PCL1P24867 279 aa2.04□□□□□ -2.08
SEC22YLR268W RHB1P25378 209 aa2.04□□□□□ -2.08
SEC22YLR268W URA7P28274 579 aaKnown RBP2.04□□□□□ -2.08
SEC22YLR268W MMS4P38257 691 aa2.04□□□□□ -2.08
SEC22YLR268W SRP72P38688 640 aaKnown RBP2.04□□□□□ -2.08
SEC22YLR268W CAK1P43568 368 aaPredicted RBP2.04□□□□□ -2.08
SEC22YLR268W RRT5P43607 289 aa2.04□□□□□ -2.08
SEC22YLR268W NCA3P46955 337 aa2.04□□□□□ -2.08
SEC22YLR268W YJR011CP47086 261 aaPredicted RBP2.04□□□□□ -2.08
SEC22YLR268W SSN8P47821 323 aa2.04□□□□□ -2.08
SEC22YLR268W YMR130WQ04223 302 aa2.04□□□□□ -2.08
SEC22YLR268W MDM30Q05930 598 aa2.04□□□□□ -2.08
SEC22YLR268W SGT1Q08446 395 aa2.04□□□□□ -2.08
SEC22YLR268W SCEIP03882 235 aa2.03□□□□□ -2.08
SEC22YLR268W SEC63P14906 663 aa2.03□□□□□ -2.08
SEC22YLR268W MDH1P17505 334 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SEC22YLR268W CLN1P20437 546 aa2.03□□□□□ -2.08
SEC22YLR268W BRF1P29056 596 aa2.03□□□□□ -2.08
SEC22YLR268W VMA8P32610 256 aaKnown RBP2.03□□□□□ -2.08
SEC22YLR268W MNS1P32906 549 aa2.03□□□□□ -2.08
SEC22YLR268W PXA2P34230 853 aa2.03□□□□□ -2.08
SEC22YLR268W SLM4P38247 162 aa2.03□□□□□ -2.08
SEC22YLR268W RFC3P38629 340 aa2.03□□□□□ -2.08
SEC22YLR268W PRM5P40476 318 aa2.03□□□□□ -2.08
SEC22YLR268W ART5P53244 586 aaKnown RBP2.03□□□□□ -2.08
SEC22YLR268W HOT1Q03213 719 aa2.03□□□□□ -2.08
SEC22YLR268W RSN1Q03516 953 aa2.03□□□□□ -2.08
SEC22YLR268W ACL4Q03771 387 aa2.03□□□□□ -2.08
SEC22YLR268W AIM32Q04689 311 aa2.03□□□□□ -2.08
SEC22YLR268W YLR345WQ06137 509 aa2.03□□□□□ -2.08
SEC22YLR268W DIS3Q08162 1001 aaKnown RBP2.03□□□□□ -2.08
SEC22YLR268W REX4Q08237 289 aa2.03□□□□□ -2.08
SEC22YLR268W RKM1Q08961 583 aaPredicted RBP2.03□□□□□ -2.08
SEC22YLR268W MED2Q12124 431 aa2.03□□□□□ -2.08
SEC22YLR268W PKH2Q12236 1081 aaKnown RBP2.03□□□□□ -2.08
SEC22YLR268W ARG4P04076 463 aaPredicted RBP2.02□□□□□ -2.09
SEC22YLR268W SAM1P10659 382 aaKnown RBP2.02□□□□□ -2.09
SEC22YLR268W SAM2P19358 384 aaKnown RBP2.02□□□□□ -2.09
SEC22YLR268W CPR2P23285 205 aa2.02□□□□□ -2.09
SEC22YLR268W GEX1P25596 615 aa2.02□□□□□ -2.09
SEC22YLR268W TIP1P27654 210 aaPredicted RBP2.02□□□□□ -2.09
SEC22YLR268W SOR1P35497 357 aaKnown RBP2.02□□□□□ -2.09
SEC22YLR268W APE3P37302 537 aaKnown RBP2.02□□□□□ -2.09
SEC22YLR268W RIB5P38145 238 aa2.02□□□□□ -2.09
SEC22YLR268W MIX23P38162 196 aa2.02□□□□□ -2.09
SEC22YLR268W OST1P41543 476 aaKnown RBP2.02□□□□□ -2.09
SEC22YLR268W ZIM17P42844 174 aa2.02□□□□□ -2.09
SEC22YLR268W LAM5P43560 674 aa2.02□□□□□ -2.09
SEC22YLR268W HMS2P47175 358 aa2.02□□□□□ -2.09
SEC22YLR268W TCB2P48231 1178 aa2.02□□□□□ -2.09
SEC22YLR268W YML6P51998 286 aa2.02□□□□□ -2.09
SEC22YLR268W DCS1Q06151 350 aa2.02□□□□□ -2.09
SEC22YLR268W SOR2Q07786 357 aa2.02□□□□□ -2.09
SEC22YLR268W TIM18Q08749 192 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms