RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W LTV1P34078 463 aa3.03□□□□□ -1.92
NOP56YLR197W APE4P38821 490 aa3.03□□□□□ -1.92
NOP56YLR197W RPS0BP46654 252 aaKnown RBP3.03□□□□□ -1.92
NOP56YLR197W ECM27P47144 725 aa3.03□□□□□ -1.92
NOP56YLR197W RPT4P53549 437 aaKnown RBP3.03□□□□□ -1.92
NOP56YLR197W MMR1Q06324 491 aa3.03□□□□□ -1.92
NOP56YLR197W DCI1Q08558 271 aa3.03□□□□□ -1.92
NOP56YLR197W MUM3Q08750 479 aa3.03□□□□□ -1.92
NOP56YLR197W SPE3Q12074 293 aaKnown RBP3.03□□□□□ -1.92
NOP56YLR197W SPO7P18410 259 aa3.02□□□□□ -1.93
NOP56YLR197W RPI1P23250 407 aaKnown RBP3.02□□□□□ -1.93
NOP56YLR197W TIP1P27654 210 aaPredicted RBP3.02□□□□□ -1.93
NOP56YLR197W BEM1P29366 551 aa3.02□□□□□ -1.93
NOP56YLR197W SIN4P32259 974 aa3.02□□□□□ -1.93
NOP56YLR197W YOX1P34161 385 aa3.02□□□□□ -1.93
NOP56YLR197W MIX23P38162 196 aa3.02□□□□□ -1.93
NOP56YLR197W RFC3P38629 340 aa3.02□□□□□ -1.93
NOP56YLR197W SEC28P40509 296 aaKnown RBP3.02□□□□□ -1.93
NOP56YLR197W YIL067CP40514 678 aa3.02□□□□□ -1.93
NOP56YLR197W YJR011CP47086 261 aaPredicted RBP3.02□□□□□ -1.93
NOP56YLR197W YGL242CP53066 181 aa3.02□□□□□ -1.93
NOP56YLR197W IBD2P53892 351 aa3.02□□□□□ -1.93
NOP56YLR197W MRP51Q02950 344 aa3.02□□□□□ -1.93
NOP56YLR197W RRN11Q04712 507 aa3.02□□□□□ -1.93
NOP56YLR197W HEL2Q05580 639 aaKnown RBP3.02□□□□□ -1.93
NOP56YLR197W DCS1Q06151 350 aa3.02□□□□□ -1.93
NOP56YLR197W YOR387CQ08910 206 aa3.02□□□□□ -1.93
NOP56YLR197W AEP3Q12089 606 aa3.02□□□□□ -1.93
NOP56YLR197W YPR022CQ12139 1133 aa3.02□□□□□ -1.93
NOP56YLR197W HIS4P00815 799 aaKnown RBP3.01□□□□□ -1.93
NOP56YLR197W SPT15P13393 240 aaKnown RBP3.01□□□□□ -1.93
NOP56YLR197W OPI1P21957 404 aa3.01□□□□□ -1.93
NOP56YLR197W ITR1P30605 584 aa3.01□□□□□ -1.93
NOP56YLR197W RXT2P38255 430 aa3.01□□□□□ -1.93
NOP56YLR197W YHR054CP38780 354 aa3.01□□□□□ -1.93
NOP56YLR197W MST28P39552 234 aa3.01□□□□□ -1.93
NOP56YLR197W OST1P41543 476 aaKnown RBP3.01□□□□□ -1.93
NOP56YLR197W FRE4P53746 719 aa3.01□□□□□ -1.93
NOP56YLR197W MDM30Q05930 598 aa3.01□□□□□ -1.93
NOP56YLR197W DIS3Q08162 1001 aaKnown RBP3.01□□□□□ -1.93
NOP56YLR197W ESA1Q08649 445 aa3.01□□□□□ -1.93
NOP56YLR197W TIM18Q08749 192 aa3.01□□□□□ -1.93
NOP56YLR197W RKM1Q08961 583 aaPredicted RBP3.01□□□□□ -1.93
NOP56YLR197W PKH2Q12236 1081 aaKnown RBP3.01□□□□□ -1.93
NOP56YLR197W YLR108CQ12259 485 aa3.01□□□□□ -1.93
NOP56YLR197W ERV2Q12284 196 aa3.01□□□□□ -1.93
NOP56YLR197W CPR4P25334 318 aa3□□□□□ -1.93
NOP56YLR197W RHB1P25378 209 aa3□□□□□ -1.93
NOP56YLR197W GEX1P25596 615 aa3□□□□□ -1.93
NOP56YLR197W DEG1P31115 442 aaKnown RBP3□□□□□ -1.93
NOP56YLR197W YBL059WP34224 193 aa3□□□□□ -1.93
NOP56YLR197W RIB5P38145 238 aa3□□□□□ -1.93
NOP56YLR197W RFS1P38234 210 aaKnown RBP3□□□□□ -1.93
NOP56YLR197W SSN8P47821 323 aa3□□□□□ -1.93
NOP56YLR197W ELP3Q02908 557 aaKnown RBP3□□□□□ -1.93
NOP56YLR197W PEX25Q02969 394 aa3□□□□□ -1.93
NOP56YLR197W PBA1Q05778 276 aa3□□□□□ -1.93
NOP56YLR197W UAF30Q08747 228 aa3□□□□□ -1.93
NOP56YLR197W RPN5Q12250 445 aaKnown RBP3□□□□□ -1.93
NOP56YLR197W MTR10Q99189 972 aa3□□□□□ -1.93
NOP56YLR197W RAD61Q99359 647 aa3□□□□□ -1.93
NOP56YLR197W SPS22P25380 463 aa2.99□□□□□ -1.93
NOP56YLR197W NAM9P27929 486 aa2.99□□□□□ -1.93
NOP56YLR197W PUP2P32379 260 aa2.99□□□□□ -1.93
NOP56YLR197W VPH1P32563 840 aaKnown RBP2.99□□□□□ -1.93
NOP56YLR197W PAD1P33751 242 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
NOP56YLR197W NDT80P38830 627 aa2.99□□□□□ -1.93
NOP56YLR197W LYS1P38998 373 aaRIP-Chip data2.99□□□□□ -1.93not detected
NOP56YLR197W SER3P40054 469 aa2.99□□□□□ -1.93
NOP56YLR197W EFM4P40516 257 aa2.99□□□□□ -1.93
NOP56YLR197W LAM5P43560 674 aa2.99□□□□□ -1.93
NOP56YLR197W TOM22P49334 152 aa2.99□□□□□ -1.93
NOP56YLR197W YNR048WP53740 393 aa2.99□□□□□ -1.93
NOP56YLR197W RRP12Q12754 1228 aaKnown RBP2.99□□□□□ -1.93
NOP56YLR197W TY1B-AO13527 1196 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W SCEIP03882 235 aa2.98□□□□□ -1.93
NOP56YLR197W SDH3P33421 198 aa2.98□□□□□ -1.93
NOP56YLR197W VHS2P40463 436 aa2.98□□□□□ -1.93
NOP56YLR197W HXT11P54862 567 aa2.98□□□□□ -1.93
NOP56YLR197W ORT1Q12375 292 aa2.98□□□□□ -1.93
NOP56YLR197W SPT7P35177 1332 aa2.98□□□□□ -1.93
NOP56YLR197W HHF1P02309 103 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W TEF1P02994 458 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W ARG4P04076 463 aaPredicted RBP2.98□□□□□ -1.93
NOP56YLR197W RPL1AP0CX43 217 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W RPL1BP0CX44 217 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W RRP7P25368 297 aaPredicted RBP2.98□□□□□ -1.93
NOP56YLR197W SWH1P35845 1188 aa2.98□□□□□ -1.93
NOP56YLR197W SDS24P38314 527 aa2.98□□□□□ -1.93
NOP56YLR197W FAA2P39518 744 aa2.98□□□□□ -1.93
NOP56YLR197W WWM1P43582 211 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W HMS2P47175 358 aa2.98□□□□□ -1.93
NOP56YLR197W TOF1P53840 1238 aa2.98□□□□□ -1.93
NOP56YLR197W OCA2P53949 197 aa2.98□□□□□ -1.93
NOP56YLR197W TSR1Q07381 788 aaKnown RBP2.98□□□□□ -1.93
NOP56YLR197W REX4Q08237 289 aa2.98□□□□□ -1.93
NOP56YLR197W BUG1Q12191 341 aa2.98□□□□□ -1.93
NOP56YLR197W NAT1P12945 854 aaKnown RBP2.97□□□□□ -1.93
NOP56YLR197W SLY1P22213 666 aa2.97□□□□□ -1.93
NOP56YLR197W SOR1P35497 357 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms