RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C ARG4P04076 463 aaPredicted RBP3.41□□□□□ -1.86
SMD3YLR147C CTR86P25355 563 aa3.41□□□□□ -1.86
SMD3YLR147C LSB5P25369 354 aa3.41□□□□□ -1.86
SMD3YLR147C RRT2P38332 387 aa3.41□□□□□ -1.86
SMD3YLR147C DED81P38707 554 aaKnown RBP3.41□□□□□ -1.86
SMD3YLR147C RPS0BP46654 252 aaKnown RBP3.41□□□□□ -1.86
SMD3YLR147C ARX1Q03862 593 aaKnown RBP3.41□□□□□ -1.86
SMD3YLR147C SNX3Q08826 162 aaKnown RBP3.41□□□□□ -1.86
SMD3YLR147C FDH1Q08911 376 aa3.41□□□□□ -1.86
SMD3YLR147C RKM1Q08961 583 aaPredicted RBP3.41□□□□□ -1.86
SMD3YLR147C TRP1P00912 224 aa3.4□□□□□ -1.87
SMD3YLR147C NFT1P0CE68 1218 aa3.4□□□□□ -1.87
SMD3YLR147C CLB3P24870 427 aa3.4□□□□□ -1.87
SMD3YLR147C DAL2P25335 343 aa3.4□□□□□ -1.87
SMD3YLR147C ARA1P38115 344 aa3.4□□□□□ -1.87
SMD3YLR147C NAB3P38996 802 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SMD3YLR147C HMS2P47175 358 aa3.4□□□□□ -1.87
SMD3YLR147C MDM1Q01846 1127 aa3.4□□□□□ -1.87
SMD3YLR147C YLR287CQ05881 355 aa3.4□□□□□ -1.87
SMD3YLR147C BSC6Q08280 497 aa3.4□□□□□ -1.87
SMD3YLR147C SGT1Q08446 395 aa3.4□□□□□ -1.87
SMD3YLR147C VAM3Q12241 283 aa3.4□□□□□ -1.87
SMD3YLR147C ISN1Q99312 450 aa3.4□□□□□ -1.87
SMD3YLR147C CYC3P06182 269 aa3.39□□□□□ -1.87
SMD3YLR147C CLC1P17891 233 aa3.39□□□□□ -1.87
SMD3YLR147C RHB1P25378 209 aa3.39□□□□□ -1.87
SMD3YLR147C BEM1P29366 551 aa3.39□□□□□ -1.87
SMD3YLR147C MNS1P32906 549 aa3.39□□□□□ -1.87
SMD3YLR147C COS5P47187 383 aa3.39□□□□□ -1.87
SMD3YLR147C YGL039WP53183 348 aaKnown RBP3.39□□□□□ -1.87
SMD3YLR147C YGR250CP53316 781 aaKnown RBP3.39□□□□□ -1.87
SMD3YLR147C RRP45Q05636 305 aaKnown RBP3.39□□□□□ -1.87
SMD3YLR147C COS7Q07788 383 aa3.39□□□□□ -1.87
SMD3YLR147C SKI7Q08491 747 aaPredicted RBP3.39□□□□□ -1.87
SMD3YLR147C INH1P01097 85 aa3.38□□□□□ -1.87
SMD3YLR147C RVS161P25343 265 aaKnown RBP3.38□□□□□ -1.87
SMD3YLR147C HIR2P32480 875 aa3.38□□□□□ -1.87
SMD3YLR147C YME2P32843 850 aa3.38□□□□□ -1.87
SMD3YLR147C SOR1P35497 357 aaKnown RBP3.38□□□□□ -1.87
SMD3YLR147C KKQ8P36004 724 aa3.38□□□□□ -1.87
SMD3YLR147C LSM5P40089 93 aaKnown RBP3.38□□□□□ -1.87
SMD3YLR147C SSU1P41930 458 aa3.38□□□□□ -1.87
SMD3YLR147C CWC25P53854 179 aaKnown RBP3.38□□□□□ -1.87
SMD3YLR147C BET5Q03630 159 aa3.38□□□□□ -1.87
SMD3YLR147C YMR155WQ03795 547 aa3.38□□□□□ -1.87
SMD3YLR147C SOR2Q07786 357 aa3.38□□□□□ -1.87
SMD3YLR147C HSP42Q12329 375 aa3.38□□□□□ -1.87
SMD3YLR147C KAR9P32526 644 aa3.37□□□□□ -1.87
SMD3YLR147C MUD1P32605 298 aaKnown RBP3.37□□□□□ -1.87
SMD3YLR147C GPD2P41911 440 aaKnown RBP3.37□□□□□ -1.87
SMD3YLR147C RSN1Q03516 953 aa3.37□□□□□ -1.87
SMD3YLR147C SCM3Q12334 223 aa3.37□□□□□ -1.87
SMD3YLR147C SFI1Q12369 946 aa3.37□□□□□ -1.87
SMD3YLR147C SOD1P00445 154 aaKnown RBP3.36□□□□□ -1.87
SMD3YLR147C SPO12P17123 173 aa3.36□□□□□ -1.87
SMD3YLR147C RAD57P25301 460 aa3.36□□□□□ -1.87
SMD3YLR147C SMY1P32364 656 aaKnown RBP3.36□□□□□ -1.87
SMD3YLR147C NFU1P32860 256 aa3.36□□□□□ -1.87
SMD3YLR147C APE3P37302 537 aaKnown RBP3.36□□□□□ -1.87
SMD3YLR147C NTC20P38302 140 aaPredicted RBP3.36□□□□□ -1.87
SMD3YLR147C YAL037WP39728 267 aa3.36□□□□□ -1.87
SMD3YLR147C AZR1P50080 613 aa3.36□□□□□ -1.87
SMD3YLR147C YGL138CP53122 345 aa3.36□□□□□ -1.87
SMD3YLR147C MDG1P53885 366 aa3.36□□□□□ -1.87
SMD3YLR147C GPI15P53961 229 aa3.36□□□□□ -1.87
SMD3YLR147C SKO1Q02100 647 aa3.36□□□□□ -1.87
SMD3YLR147C TAF12Q03761 539 aa3.36□□□□□ -1.87
SMD3YLR147C REX4Q08237 289 aa3.36□□□□□ -1.87
SMD3YLR147C WTM1Q12363 437 aaKnown RBP3.36□□□□□ -1.87
SMD3YLR147C SCEIP03882 235 aa3.35□□□□□ -1.87
SMD3YLR147C SRB7P47822 140 aa3.35□□□□□ -1.87
SMD3YLR147C BRO1P48582 844 aa3.35□□□□□ -1.87
SMD3YLR147C PHB2P50085 310 aa3.35□□□□□ -1.87
SMD3YLR147C YMR027WQ04371 470 aa3.35□□□□□ -1.87
SMD3YLR147C PCF11P39081 626 aaPredicted RBP3.34□□□□□ -1.87
SMD3YLR147C JLP2P40206 208 aa3.34□□□□□ -1.87
SMD3YLR147C PHO86P46956 311 aa3.34□□□□□ -1.87
SMD3YLR147C SHY1P53266 389 aa3.34□□□□□ -1.87
SMD3YLR147C PEX25Q02969 394 aa3.34□□□□□ -1.87
SMD3YLR147C GIP3Q03016 1276 aa3.34□□□□□ -1.87
SMD3YLR147C RRG1Q12167 365 aaPredicted RBP3.34□□□□□ -1.87
SMD3YLR147C YRF1-4O13559 1382 aa3.34□□□□□ -1.88
SMD3YLR147C YCR051WP25631 222 aa3.33□□□□□ -1.88
SMD3YLR147C POP5P28005 173 aa3.33□□□□□ -1.88
SMD3YLR147C PRS1P32895 427 aaKnown RBP3.33□□□□□ -1.88
SMD3YLR147C TSA2Q04120 196 aa3.33□□□□□ -1.88
SMD3YLR147C ROY1Q04847 553 aa3.33□□□□□ -1.88
SMD3YLR147C SRL2Q12020 392 aa3.33□□□□□ -1.88
SMD3YLR147C SPO7P18410 259 aa3.32□□□□□ -1.88
SMD3YLR147C RHO5P53879 331 aaKnown RBP3.32□□□□□ -1.88
SMD3YLR147C BNI5P53890 448 aaKnown RBP3.32□□□□□ -1.88
SMD3YLR147C OAZ1Q02803 292 aa3.32□□□□□ -1.88
SMD3YLR147C KAP120Q02932 1032 aa3.32□□□□□ -1.88
SMD3YLR147C BCH1Q05029 724 aa3.32□□□□□ -1.88
SMD3YLR147C DON1Q05610 365 aa3.32□□□□□ -1.88
SMD3YLR147C DIS3Q08162 1001 aaKnown RBP3.32□□□□□ -1.88
SMD3YLR147C YRM1Q12340 786 aa3.32□□□□□ -1.88
SMD3YLR147C SRV2P17555 526 aaKnown RBP3.31□□□□□ -1.88
SMD3YLR147C NIP1P32497 812 aaKnown RBP3.31□□□□□ -1.88
SMD3YLR147C CSE2P33308 149 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms