RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C AMD1P15274 810 aaKnown RBP3.86□□□□□ -1.79
USB1YLR132C ADK2P26364 225 aa3.86□□□□□ -1.79
USB1YLR132C RML2P32611 393 aa3.86□□□□□ -1.79
USB1YLR132C APE3P37302 537 aaKnown RBP3.86□□□□□ -1.79
USB1YLR132C THI2P38141 450 aa3.86□□□□□ -1.79
USB1YLR132C SHO1P40073 367 aa3.86□□□□□ -1.79
USB1YLR132C FAU1P40099 211 aa3.86□□□□□ -1.79
USB1YLR132C COS5P47187 383 aa3.86□□□□□ -1.79
USB1YLR132C RLI1Q03195 608 aaKnown RBP3.86□□□□□ -1.79
USB1YLR132C ROY1Q04847 553 aa3.86□□□□□ -1.79
USB1YLR132C YMR317WQ04893 1140 aa3.86□□□□□ -1.79
USB1YLR132C COS7Q07788 383 aa3.86□□□□□ -1.79
USB1YLR132C SIL1Q08199 421 aa3.86□□□□□ -1.79
USB1YLR132C YAR066WP0CX18 203 aa3.85□□□□□ -1.79
USB1YLR132C YHR214WP0CX19 203 aa3.85□□□□□ -1.79
USB1YLR132C BUB3P26449 341 aa3.85□□□□□ -1.79
USB1YLR132C YIM1P28625 365 aa3.85□□□□□ -1.79
USB1YLR132C SEC1P30619 724 aaKnown RBP3.85□□□□□ -1.79
USB1YLR132C CRM1P30822 1084 aaKnown RBP3.85□□□□□ -1.79
USB1YLR132C NIP100P33420 868 aa3.85□□□□□ -1.79
USB1YLR132C MMS4P38257 691 aa3.85□□□□□ -1.79
USB1YLR132C MDM31P38880 579 aa3.85□□□□□ -1.79
USB1YLR132C TFG2P41896 400 aaPredicted RBP3.85□□□□□ -1.79
USB1YLR132C RTT101P47050 842 aa3.85□□□□□ -1.79
USB1YLR132C SKO1Q02100 647 aa3.85□□□□□ -1.79
USB1YLR132C TRM44Q02648 567 aaKnown RBP3.85□□□□□ -1.79
USB1YLR132C RPM2Q02773 1202 aa3.85□□□□□ -1.79
USB1YLR132C ARX1Q03862 593 aaKnown RBP3.85□□□□□ -1.79
USB1YLR132C HSP31Q04432 237 aa3.85□□□□□ -1.79
USB1YLR132C ERB1Q04660 807 aaKnown RBP3.85□□□□□ -1.79
USB1YLR132C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
USB1YLR132C KEL3Q08979 651 aaPredicted RBP3.85□□□□□ -1.79
USB1YLR132C SET6Q12529 373 aa3.85□□□□□ -1.79
USB1YLR132C HPR1P17629 752 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C VMA8P32610 256 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C PEX5P35056 612 aa3.84□□□□□ -1.79
USB1YLR132C FRE2P36033 711 aa3.84□□□□□ -1.79
USB1YLR132C FMP46P36141 133 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C YBP1P38315 674 aa3.84□□□□□ -1.79
USB1YLR132C ISC1P40015 477 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C ALG8P40351 577 aa3.84□□□□□ -1.79
USB1YLR132C ART5P53244 586 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C YGR250CP53316 781 aaKnown RBP3.84□□□□□ -1.79
USB1YLR132C PNG1Q02890 363 aa3.84□□□□□ -1.79
USB1YLR132C MED2Q12124 431 aa3.84□□□□□ -1.79
USB1YLR132C LYS2P07702 1392 aa3.84□□□□□ -1.79
USB1YLR132C RPL20AP0CX23 172 aaKnown RBP3.83□□□□□ -1.8
USB1YLR132C RPL20BP0CX24 172 aaPredicted RBP3.83□□□□□ -1.8
USB1YLR132C CLB1P24868 471 aa3.83□□□□□ -1.8
USB1YLR132C SPC110P32380 944 aa3.83□□□□□ -1.8
USB1YLR132C CAK1P43568 368 aaPredicted RBP3.83□□□□□ -1.8
USB1YLR132C GWT1P47026 490 aa3.83□□□□□ -1.8
USB1YLR132C YML6P51998 286 aa3.83□□□□□ -1.8
USB1YLR132C BNI5P53890 448 aaKnown RBP3.83□□□□□ -1.8
USB1YLR132C HOT1Q03213 719 aa3.83□□□□□ -1.8
USB1YLR132C YDR131CQ03899 556 aa3.83□□□□□ -1.8
USB1YLR132C SXM1Q04175 944 aaKnown RBP3.83□□□□□ -1.8
USB1YLR132C ERP1Q05359 219 aaKnown RBP3.83□□□□□ -1.8
USB1YLR132C HCR1Q05775 265 aaKnown RBP3.83□□□□□ -1.8
USB1YLR132C ALE1Q08548 619 aa3.83□□□□□ -1.8
USB1YLR132C MUM3Q08750 479 aa3.83□□□□□ -1.8
USB1YLR132C VAM3Q12241 283 aa3.83□□□□□ -1.8
USB1YLR132C YMR230W-AQ3E7B5 62 aa3.83□□□□□ -1.8
USB1YLR132C VPS13Q07878 3144 aa3.83□□□□□ -1.8
USB1YLR132C RIP1P08067 215 aa3.82□□□□□ -1.8
USB1YLR132C ATR1P13090 542 aa3.82□□□□□ -1.8
USB1YLR132C NDI1P32340 513 aa3.82□□□□□ -1.8
USB1YLR132C APE2P32454 952 aaKnown RBP3.82□□□□□ -1.8
USB1YLR132C PRP21P32524 280 aaPredicted RBP3.82□□□□□ -1.8
USB1YLR132C MTC4P38335 694 aaKnown RBP3.82□□□□□ -1.8
USB1YLR132C YHR054CP38780 354 aa3.82□□□□□ -1.8
USB1YLR132C RPH1P39956 796 aa3.82□□□□□ -1.8
USB1YLR132C VMA13P41807 478 aaKnown RBP3.82□□□□□ -1.8
USB1YLR132C ZIM17P42844 174 aa3.82□□□□□ -1.8
USB1YLR132C RPS0BP46654 252 aaKnown RBP3.82□□□□□ -1.8
USB1YLR132C ECM27P47144 725 aa3.82□□□□□ -1.8
USB1YLR132C YIF1P53845 314 aaKnown RBP3.82□□□□□ -1.8
USB1YLR132C YDR387CQ04162 555 aa3.82□□□□□ -1.8
USB1YLR132C SCW10Q04951 389 aa3.82□□□□□ -1.8
USB1YLR132C REX4Q08237 289 aa3.82□□□□□ -1.8
USB1YLR132C PPT2Q12036 173 aa3.82□□□□□ -1.8
USB1YLR132C SSK22P25390 1331 aaPredicted RBP3.81□□□□□ -1.8
USB1YLR132C HIS4P00815 799 aaKnown RBP3.81□□□□□ -1.8
USB1YLR132C MRS3P10566 314 aa3.81□□□□□ -1.8
USB1YLR132C RPI1P23250 407 aaKnown RBP3.81□□□□□ -1.8
USB1YLR132C YCR100CP25606 316 aa3.81□□□□□ -1.8
USB1YLR132C BRF1P29056 596 aa3.81□□□□□ -1.8
USB1YLR132C PIM1P36775 1133 aa3.81□□□□□ -1.8
USB1YLR132C KEL1P38853 1164 aaKnown RBP3.81□□□□□ -1.8
USB1YLR132C YMR147WP40218 223 aaKnown RBP3.81□□□□□ -1.8
USB1YLR132C SSN8P47821 323 aa3.81□□□□□ -1.8
USB1YLR132C VPS9P54787 451 aa3.81□□□□□ -1.8
USB1YLR132C CIK1Q01649 594 aa3.81□□□□□ -1.8
USB1YLR132C YMR130WQ04223 302 aa3.81□□□□□ -1.8
USB1YLR132C RTT103Q05543 409 aa3.81□□□□□ -1.8
USB1YLR132C VPS54Q12071 889 aa3.81□□□□□ -1.8
USB1YLR132C RKM5Q12367 367 aa3.81□□□□□ -1.8
USB1YLR132C RPL15AP05748 204 aaKnown RBP3.8□□□□□ -1.8
USB1YLR132C MDH1P17505 334 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
USB1YLR132C URA4P20051 364 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms